HHsearch 1.5 NAME d2ns0a1 FAM FILE d2ns0a1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d2ns0a1.a3m DATE Mon Mar 8 17:43:04 2010 LENG 85 match states, 85 columns in multiple alignment FILT 38 out of 42 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.6 EVD 0.3996 -0.1941 SEQ >ss_dssp CCSCHHHHHHHHHHHHHHSCTTCCBCHHHHHHHHCTTSCGGGHHHHHHHHHHHHHTTSEEEEETTEECCTTTCCSCCEEEECCCC >sa_dssp EECDEEDACEBACDCAEEDEEEDCACBCCAADDCCEEECEEBCEDABDAAACBCEEDDACABCEEDECDACECEDEBDADCCEEE >ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCEECCHHHCCCCEEEECCCCC >ss_conf 9779899999999999824899874889999751723334643999999999974392798648867386453441673026899 >Consensus xxxsxxxiexxIlxllxxrxxxkSicPsevARalxxxxWrxlmxxVRxxAxxLaxxGxixIxrkGkpVdpxxxrGxxRlrlprxx >d2ns0a1 XTVSDRELEECIRALLDARADSASICPSDVARAVAPDDWRPLXEPVREAAGRLADAGEVEVTQKGAVVDPRSARGPIRIRWTRTD >UniRef50_A3UK70(1-82:90) Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UK70_9RHOB E=2e-18 s/c=1.14 id=35% cov=98% --MSEDVIETAILSLVEQRGPDKSICPSEAAREVFPEDFQSRMRHVRNAAIHLARQGKIVILRKGKPVDPENFKGVYRLAKAPE- >UniRef50_A9E8L8(2-85:88) Putative uncharacterized protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E8L8_9RHOB E=8e-16 s/c=1.01 id=34% cov=96% --IDPERIAATIVELAAARGADKTICPSEVARYLGGQNedmWRPLMDPIREQAIKLDGEGAILIKQGGVRADPKTLTGIYRIAIAK-- >UniRef50_Q3J0E3(2-80:81) Putative uncharacterized protein n=3 Tax=Rhodobacter sphaeroides RepID=Q3J0E3_RHOS4 E=6e-14 s/c=1.00 id=40% cov=94% -TRSDERVRAILMDLAQARGRGASFCPSEAARRMGPD-WRAHMEEVRRVADLCVAEGRLVMSQKGRPVDPATVRGPVRLSL---- >UniRef50_A7INT4(34-115:115) Putative uncharacterized protein n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7INT4_XANP2 E=7e-11 s/c=0.83 id=32% cov=96% ----DLSTEAALLRLTAACGPGKSISPMDAAQALMTEaEWQRALPVVRRVAVRMAQEGRLLIYRKGKPIDPAELRGVYRIGAPRDE >UniRef50_A3WEK3(2-83:86) Putative uncharacterized protein n=3 Tax=Alphaproteobacteria RepID=A3WEK3_9SPHN E=5e-09 s/c=0.76 id=38% cov=93% ----NSEAAAAIRTLLSQRRKVATVCPSEAARLIAgpGGEWRALMEPVHAAVDAMHEAGEITLSWKGKRLARRS--GAYRIALPGE- >UniRef50_A6SJH3(13-101:103) Predicted protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6SJH3_BOTFB E=1e-08 s/c=0.68 id=34% cov=89% -------IERYINHFLESRQSPKTFCPSEVARALAHSElqalghscWREAMPDIRSILFTMRENNDVEILQKGVVLEGDlgaglaNVVGPIRVRKP--- >UniRef50_A8TTW8(40-121:126) Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTW8_9PROT E=2e-08 s/c=0.73 id=38% cov=86% ----------AILDACTAAGPGKSIDPAIVARALGGSpsdvvPWRVLIRRIRAAAAALQDRGRIAVLRKGKPVHIRAARGVIRLALP--- >UniRef50_B4RGT9(5-83:90) Putative uncharacterized protein n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RGT9_PHEZH E=3e-16 s/c=1.09 id=35% cov=94% -----QAVEDAIFDLLDKAAPGKSVSPEDVAKAVDPAGWRRELGKVRAVAVGLARAGRIVILRHNKPADPDTFKGVWRMRLPTE- >UniRef50_C5SP19(5-80:82) Putative uncharacterized protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SP19_9CAUL E=2e-13 s/c=1.01 id=39% cov=88% -------VEELIVELLTELGDKETLSPNQVAKTINAENWRRQLPQVRAAIGQLVEAGRIEVVRKGKVVAFDGIRGIWRIRL---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * X 1 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 1 * * * * * * * 0 0 0 T 2 * * * * * * * * * * * * * * * * 0 * * * 2 0 * * * * * * 1490 0 0 V 3 * * * * * * * 2496 * * 2520 * * * 2494 * * 1087 * * 3 0 * * * * * * 2491 0 0 S 4 * * 3193 * * * * * * * * * * * * 360 3164 * * * 4 0 * * * * * * 2754 0 0 D 5 3879 * 1008 3045 * * * * * * * 2812 3159 4082 * * * * * * 5 0 * * * * * * 3268 0 0 R 6 1771 * 3265 2071 * * * * 5052 4199 * * * 2752 5067 4099 * 4517 * * 6 0 * * * * * * 3379 0 0 E 7 1873 * 4711 2424 * * * * 3408 * * * * 3756 2267 4487 4643 4575 * * 7 0 * * * * * * 3449 0 0 L 8 4653 * * 5461 * 4717 * 1485 * 1721 5130 * * 4879 * * 5055 2774 * * 8 0 * * * * * * 3767 0 0 E 9 2575 * 4172 1149 * * * * 4879 * * * * 4857 2358 4881 5149 * * * 9 0 * * * * * * 3767 0 0 E 10 1584 * 2519 2888 * 5202 * * 4948 * * * * 5182 3087 3626 4375 5441 * * 10 0 * * * * * * 3766 0 0 C 11 1458 5953 5187 5426 * 4947 * 3434 * 4015 * * * 5076 5634 5787 2032 5261 * 4507 11 0 * * * * * * 3818 0 0 I 12 * * * * * * * 203 * 3687 5549 * * * * * * 4944 * * 12 0 * * * * * * 3818 0 0 R 13 * 5283 * * 4151 * * 3758 * 839 5011 4507 * * 3489 * * 3045 * * 13 48 4942 * 2000 415 * * 3818 1000 0 A 14 2146 * 2066 2659 * * 4507 * * * * * * 5355 2551 3556 4243 * * * 14 0 * * * * * * 3818 0 0 L 15 5288 * * * 4507 * * 5290 4947 526 4757 * * 4952 * * 3620 5187 * * 15 0 * * * * * * 3818 0 0 L 16 3397 3267 * * * * * * * 796 * * * * * * 3652 2777 * * 16 0 * * * * * * 3818 0 0 D 17 1330 * 4597 3549 * 4211 * * * * * * * 5011 2889 3105 3140 5283 * * 17 0 * * * * * * 3818 0 0 A 18 1664 * 4363 2563 * 4286 4618 * 2625 * * * * 3244 5215 4507 4797 * * * 18 37 * 5290 * * * * 3818 0 0 R 19 2510 5103 * * * * * * 5214 4814 * * * * 515 * * 4914 * * 19 0 * * * * 0 * 3815 0 1000 A 20 2243 * 5006 4473 * 1186 * * * * * * 5108 3358 3133 * 4944 * * * 20 30 * 5602 * * * * 3818 0 0 D 21 2914 * 3363 5093 * 4391 4034 * 4936 * * * 1120 4770 4998 4487 5227 * * * 21 46 4989 * 2000 415 0 * 3818 1000 1000 S 22 3506 * 2905 4096 * 1296 * * 4027 * * 4132 3708 5215 5290 5953 5834 4977 * * 22 40 * 5187 * * * * 3818 0 0 A 23 2235 * * 4817 * 5273 5203 * 797 * * * * * 4373 3734 * * * * 23 0 * * * * 0 * 3806 0 1000 S 24 * * * * * * * * * * * * * * * 949 1053 * * * 24 0 * * * * * * 3818 0 0 I 25 5243 5355 * * 3737 * * 794 * 2838 * * * * * * 5076 2968 * * 25 0 * * * * * * 3818 0 0 C 26 * 522 3292 5006 * * * * * * * * * * * 2553 * * * * 26 0 * * * * * * 3818 0 0 P 27 4238 * * * * * * * * * * * 79 * * * * * * * 27 0 * * * * * * 3818 0 0 S 28 3544 * * 4286 * * * * * * 4045 4839 4238 * * 693 3380 * * * 28 0 * * * * * * 3818 0 0 D 29 * * 1993 667 * * * 5288 * * * * * 4035 * 4952 * * * * 29 31 5544 * 4524 64 * * 3818 1000 0 V 30 1637 * * * * * * 2826 * * * * * * * * * 896 * * 30 0 * * * * * * 3818 0 0 A 31 0 * * * * * * * * * * * * * * * * * * * 31 0 * * * * * * 3818 0 0 R 32 * * * * * * 4238 * 2348 * * * * 5144 469 * * * * * 32 0 * * * * * * 3818 0 0 A 33 781 * * 4171 * * 4079 * * 4104 5076 * * 5603 5011 4459 4171 4797 * 5216 33 48 4942 * 3000 193 * * 3818 1000 0 V 34 * * * 5634 4500 * * 2504 * 965 3977 * * * * * * 2446 * * 34 109 3787 * 2391 305 * * 3818 1805 0 A 35 1937 * 4206 4105 4245 1791 5544 * * * 5144 4839 * 5006 5187 3196 4944 * * * 35 193 2999 * 1201 824 * * 3818 2248 0 P 36 3021 * 3870 5215 * 1745 4507 * * * * * 1396 * * * 4073 * * * 36 144 3398 * 813 1215 * * 3818 2068 0 D 37 4115 * 1779 1596 * 4977 * * 5570 5355 * * * 3991 * 3041 5261 4952 * * 37 215 3215 5011 1218 811 * * 3818 2026 0 D 38 3261 * 2138 2377 * 3874 5801 * * * * 2680 4046 4979 3203 4925 * * * * 38 154 3303 * 2257 339 0 * 3789 1893 1000 W 39 * * * * 4263 * * * * * * * * * * * * * 77 * 39 0 * * * * * * 3818 0 0 R 40 * * * * * 5549 3666 * * * * 5108 * 2653 528 5768 * * * * 40 0 * * * * * * 3818 0 0 P 41 2581 * 2535 2824 * 5834 * * 5243 5570 * * 2872 * 2042 5436 5261 5288 * * 41 0 * * * * * * 3818 0 0 L 42 3255 * * 5311 * * 4277 * 5108 1073 * * 4797 4074 5436 * 4942 3617 * 3617 42 0 * * * * * * 3818 0 0 X 43 * * * * 5088 * * 5256 * 1628 749 * * * * * * 5260 * * 43 0 * * * * * * 3829 0 0 E 44 4431 * 3325 2303 * 3531 * * 5570 * 5187 * 1517 3850 4360 5426 * 5290 * * 44 0 * * * * * * 3818 0 0 P 45 3655 * 3870 5011 * 5728 3567 4660 4151 * 4944 * 1719 2614 4022 * 4942 5144 * * 45 0 * * * * * * 3818 0 0 V 46 3950 * * * * 4797 * 2026 * * * * * * * * 5544 661 * * 46 0 * * * * * * 3818 0 0 R 47 * * * * * * 3960 * 5157 * * * * * 140 * * * * * 47 0 * * * * * * 3818 0 0 E 48 2097 * 3393 2912 * * * * * * * 5436 * 2983 1814 4507 4952 5157 * * 48 0 * * * * * * 3818 0 0 A 49 1391 * * 3825 * * * 3870 * * * 4098 * 4317 * 4797 4107 1851 * * 49 0 * * * * * * 3818 0 0 A 50 446 * * * * 3966 * 4839 * 4507 * * * * * * * 3025 * * 50 0 * * * * * * 3818 0 0 G 51 3209 * 3392 * 3841 3438 * 2579 * 5006 * * * * 2840 4252 * 2242 4942 * 51 0 * * * * * * 3818 0 0 R 52 2573 * 3820 3255 * 4248 4205 * 5216 5011 * * * 3143 1580 * 4507 * * * 52 0 * * * * * * 3818 0 0 L 53 * 5011 * * * * * * 4942 339 2779 * * * * * * * * * 53 0 * * * * * * 3818 0 0 A 54 898 * 5216 * * * 4977 * * 4944 4337 * * 4178 3708 4797 * 2690 * * 54 0 * * * * * * 3818 0 0 D 55 4173 * 4014 2607 * 2890 5549 * 2763 3219 * * * 3533 2726 5426 4419 * * * 55 0 * * * * * * 3818 0 0 A 56 1333 * 4797 1999 * * * * 4209 * * 4507 * 3784 3262 5544 * 5602 * * 56 0 * * * * * * 3818 0 0 G 57 * * 5243 * * 146 * * * * * 3843 * * * * * * * * 57 0 * * * * * * 3818 0 0 E 58 5216 * 4023 2423 * * 5157 4947 2772 3693 * * * 3739 1674 * * 4249 * * 58 0 * * * * * * 3818 0 0 V 59 * * * * * * * 1033 * 2184 * * * * * * * 1780 * * 59 0 * * * * * * 3818 0 0 E 60 3421 * 5426 1778 * 5276 * 4316 4944 3770 * * * 5570 5215 * 3152 2003 * * 60 0 * * * * * * 3818 0 0 V 61 4947 * * * * * * 672 * 3438 4289 * * * * * * 2348 * * 61 0 * * * * * * 3818 0 0 T 62 * * * * 5276 * * * 3620 1817 4942 * * * * 3392 1640 4839 * 2994 62 0 * * * * * * 3818 0 0 Q 63 * * * * * * * * 3898 * * * * 1264 1144 * * * 3960 * 63 0 * * * * * * 3818 0 0 K 64 * * * * * 2597 3201 * 556 * * * * * 4449 * * * * * 64 0 * * * * * * 3818 0 0 G 65 * * 4947 * * 136 * * * * * 4121 * * * * * * * * 65 0 * * * * * * 3818 0 0 A 66 4362 * * 3796 * * * * 1221 5076 * * * 3655 2853 4730 4947 2911 * * 66 34 5426 * 2000 415 * * 3818 1000 0 V 67 5603 * * * * * * * * * * * 913 * 3649 * 4362 1644 * * 67 0 * * * * * * 3818 0 0 V 68 3652 * * * * * * 3271 * 2976 * * * * * * * 536 * * 68 143 3404 * 0 * * * 3818 2077 0 D 69 3906 * 675 3818 * 4942 4410 * * * * 4952 * 4947 * 4797 4165 * * * 69 53 * 4797 * * * * 3818 0 0 P 70 4865 * * 4914 4813 4438 * 4129 * 4337 * * 561 * 4917 * * 4900 * * 70 0 * * * * 0 * 3774 0 1000 R 71 2011 5602 1804 2676 * 4246 * * 5216 * * 3597 * * 3238 5634 * * * * 71 65 4507 * 2585 263 * * 3818 1000 0 S 72 2591 * 2278 5144 * 3892 * * 5355 * * 2936 * 4952 * 3301 2039 * * * 72 129 5544 3960 0 * * * 3818 1000 0 A 73 1976 * * * 1415 * * 4750 * 3101 4427 * * * * * * 2552 * * 73 83 4167 * 1206 820 * 0 3726 1405 1414 R 74 * * * * * * 5222 * 1910 * * * * * 754 4702 5112 4413 * * 74 0 * * * * 0 * 3726 0 1414 G 75 * * * * * 0 * * * * * * * * * * * * * * 75 0 * * * * * * 3818 0 0 P 76 3569 * * * * * * 3190 * * * * 1303 * * * * 1319 * * 76 0 * * * * * * 3818 0 0 I 77 * * * * * * * 1340 * 5426 * * * * * * 5006 3750 3488 1369 77 0 * * * * * * 3818 0 0 R 78 * * * * * * * * * * * * * * 0 * * * * * 78 0 * * * * * * 3818 0 0 I 79 * * * * 5261 * * 1427 * 1009 5311 * * * * * * 4507 * 4797 79 0 * * * * * * 3818 0 0 R 80 2418 * * * * 2130 * * 4987 * * * * * 1006 4183 * * * * 80 0 * * * * * * 3786 0 0 W 81 4762 * * * * * * 3908 3194 529 4578 * * * 5154 * * * 5379 * 81 0 * * * * * * 3674 0 0 T 82 2868 * * * * * * * * * * * 549 * 4448 * 4764 3367 * * 82 0 * * * * * * 3370 0 0 R 83 * * * * * 3357 * * 2569 * * * 3720 * 790 * 3652 * * * 83 0 * * * * * * 3046 0 0 T 84 * * 3006 914 * * 3271 * * * * * * 3322 * * 2825 * * * 84 0 * * * * * * 2579 0 0 D 85 * * 341 2247 * * * * * * * * * * * * * * * * 85 0 * * 0 * * * 2013 0 0 //