HHsearch 1.5 NAME d2h80a1 FAM FILE d2h80a1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d2h80a1.a3m DATE Mon Mar 8 16:43:00 2010 LENG 71 match states, 71 columns in multiple alignment FILT 19 out of 23 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.4 EVD 0.4398 2.1390 SEQ >ss_dssp CCCCSCHHHHHHHHHHHHHHTTCHHHHHTTTTTCCCSCHHHHHTSCCSSCSTTHHHHHHHHHHHHHHHCCC >sa_dssp EEEEECDEECCEDACDCAEECECDEBAECCEEDDACDECEDCCEEEEDEDEECCDCBCDCAECACEDCEDE >ss_pred CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC >ss_conf 98761356689999899997697489999864278743004440765548687899999999976552059 >Consensus xxxxxxxEieAxeACxWLraaGFpqYAqxyeDxqFPIdixxVkxDhxfLdxDxlxSLxRRLxtLNkCaxMk >d2h80a1 LVPRGSQEIEAKEACDWLRAAGFPQYAQLYEDSQFPINIVAVKNDHDFLEKDLVEPLCRRLNTLNKCASMK >UniRef50_B3S7A6(124-182:1124) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S7A6_TRIAD E=1e-10 s/c=1.14 id=47% cov=85% -------EKDAGEACQWLKFTGFSRYARAYEDGQFPIDIATVKKDNSFMDASSINAVIRRINLLNQ----- >UniRef50_UPI0001925BE9(14-76:825) PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001925BE9 E=2e-09 s/c=1.01 id=47% cov=90% -------ELEAFEACCWLKATGFSLFAKMYEEKCFPLEVGAVKIACNHLDVDSLQSLIKRLETLNKCAKI- >UniRef50_Q4SQ02(1-64:1096) Chromosome 7 SCAF14536, whole genome shotgun sequence. (Fragment) n=5 Tax=Tetraodontidae RepID=Q4SQ02_TETNG E=3e-26 s/c=1.86 id=65% cov=92% -------EIEAREACDWLRAAGFPQYAQLFRDCRFPVDVEWAKRDHSFLDKDALDSLCRRLNTLNRCMETK >UniRef50_C3XWH2(207-270:1247) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3XWH2_BRAFL E=1e-25 s/c=1.83 id=62% cov=92% -------ELEAIDACKWLRDCGFPQYAQMYEDSCFPVDITSVETDHDFLDRDSIQSLIRRLRTLNRCASMR >UniRef50_A8JR05(1378-1441:2351) Crossveinless c, isoform C n=40 Tax=Eumetazoa RepID=A8JR05_DROME E=3e-25 s/c=1.81 id=63% cov=92% -------EIEAVEACKWLRAAGFPQYAQMYEDHQFPIDLNNVAKDHTNLENDQLQSLYRRLCVLNRCATMR >UniRef50_UPI0000D55488(41-103:768) PREDICTED: similar to rho-type GTPase activating protein n=1 Tax=Tribolium castaneum RepID=UPI0000D55488 E=2e-22 s/c=1.68 id=59% cov=90% -------EIEAAEACKWLRATGFPQYAQMYEDLQFPIDLSTVAQDHPLLEPDVLHSLFRRLQILNSCVHL- >UniRef50_B6IHN8(416-475:536) Putative uncharacterized protein n=1 Tax=Caenorhabditis briggsae RepID=B6IHN8_CAEBR E=9e-17 s/c=1.47 id=44% cov=86% -------ERDALDACSWLRKAGFSKYADQFEEGKLPIK---PSQDPTLPETD-LRSLNRRIEILNKCHTMK >UniRef50_UPI000155CC72(29-80:402) PREDICTED: similar to regulator protein p122-RhoGAP - rat n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155CC72 E=2e-20 s/c=1.92 id=70% cov=75% -------EIEAKEACDWLRATGFPQYAQLYEDLLFPVDVASVKREHDFLDRDAIEALCR------------ >UniRef50_UPI000186E7F2(3-42:969) Rho-type GTPase activating protein, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E7F2 E=3e-12 s/c=1.82 id=54% cov=58% -------------------------------DLQFPIDVSGVQKDHPFLDKDSLQSLFRRLHALNRCAKMK # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * * * * * * 0 * * * * * * * * * * 1 0 * * * * * * 1000 0 0 V 2 * * * * * * * * * * * * * * * * * 0 * * 2 0 * * * * * * 1000 0 0 P 3 * * * * * * * * * * * * 0 * * * * * * * 3 0 * * * * * * 1000 0 0 R 4 * * * * * * * * * * * * * * 0 * * * * * 4 0 * * * * * * 1000 0 0 G 5 * * * * * 0 * * * * * * * * * * * * * * 5 0 * * * * * * 1000 0 0 S 6 * * * * * * * * * * * * * * * 0 * * * * 6 0 * * * * * * 1000 0 0 Q 7 * * * * * * * * * * * * * 0 * * * * * * 7 0 * * * * * * 1000 0 0 E 8 * * * 156 * * * * 4185 * * * * 4387 * * * * * * 8 0 * * * * * * 2311 0 0 I 9 * * * * * * * 786 3287 2636 * * * * 2675 * * * * * 9 0 * * * * * * 2311 0 0 E 10 * * 1949 433 * * * * * * * * * * * * * * * * 10 0 * * * * * * 2311 0 0 A 11 0 * * * * * * * * * * * * * * * * * * * 11 0 * * * * * * 2311 0 0 K 12 4013 * * * 3320 3287 * 4041 1275 3571 * * * * 4420 * * 2937 * * 12 0 * * * * * * 2311 0 0 E 13 * * 2202 448 * * * * 4331 * * * * * * * * * * * 13 0 * * * * * * 2311 0 0 A 14 0 * * * * * * * * * * * * * * * * * * * 14 0 * * * * * * 2311 0 0 C 15 * 0 * * * * * * * * * * * * * * * * * * 15 0 * * * * * * 2311 0 0 D 16 * 3320 1439 4297 * * * * 2468 * * * * 3287 * 2675 4630 * * * 16 0 * * * * * * 2311 0 0 W 17 * * * * * * * * * * * * * * * * * * 0 * 17 0 * * * * * * 2311 0 0 L 18 * * * * * * * * * 0 * * * * * * * * * * 18 0 * * * * * * 2311 0 0 R 19 * * * * * * 4185 * 2303 * * * * * 430 * * * * * 19 0 * * * * * * 2311 0 0 A 20 556 * 4041 * 3287 * * * 2675 * * * * * * * * * * * 20 0 * * * * * * 2311 0 0 A 21 741 4041 * * * * * * * * * * * * * * 1552 * * * 21 0 * * * * * * 2311 0 0 G 22 * * * * * 0 * * * * * * * * * * * * * * 22 0 * * * * * * 2311 0 0 F 23 * * * * 0 * * * * * * * * * * * * * * * 23 0 * * * * * * 2311 0 0 P 24 * * * * * * * * * * * * 642 * * 1477 * * * * 24 0 * * * * * * 2311 0 0 Q 25 * * * * * * * * 2675 3320 * * * 642 3287 * * * * * 25 0 * * * * * * 2311 0 0 Y 26 * * * * 3320 * * * * * * * * * * * * * * 152 26 0 * * * * * * 2311 0 0 A 27 0 * * * * * * * * * * * * * * * * * * * 27 0 * * * * * * 2311 0 0 Q 28 * * 2675 * * * * * 3320 * * * * 642 3287 * * * * * 28 0 * * * * * * 2311 0 0 L 29 3287 * * * * * * * * 1120 1832 * * 2675 * * * * * * 29 0 * * * * * * 2311 0 0 Y 30 * * * * 1503 * * * * * * * * * * * * * * 628 30 0 * * * * * * 2311 0 0 E 31 * * 4297 315 * * * * 4516 * * * * * 4420 * 4185 * * * 31 0 * * * * * * 2311 0 0 D 32 * * 397 2055 * * * * * * * * * * * * * * * * 32 0 * * * * * * 2749 0 0 S 33 4810 3084 * * 4677 2059 3216 * 3424 2525 * * * * * 2778 4410 * * * 33 0 * * * * * * 2749 0 0 Q 34 * 2475 * * * 4709 * * 2761 3104 * * * 1063 4666 * * * * * 34 0 * * * * * * 2749 0 0 F 35 * * * * 230 * * * * 2761 * * * * * * * * * * 35 0 * * * * * * 2749 0 0 P 36 * * * * * * * * * * * * 0 * * * * * * * 36 0 * * * * * * 2749 0 0 I 37 * * * * * * * 427 * 2847 * * * * * * * 3094 * * 37 96 * 3951 * * * * 2749 0 0 N 38 * * 631 3375 * * * 4333 3174 * * 3358 * * * * * * * * 38 169 * 3174 * * * 0 2712 0 1000 I 39 * * * * * * * 978 * 2767 * * * * * * * 1534 * * 39 0 * * * * * 0 2512 0 1108 V 40 2719 * 3427 2738 * 2620 * * * * * 3779 * 4259 * 2275 4273 4081 * * 40 0 * * * * 1000 1000 2512 0 1108 A 41 2296 * 4291 * * 4492 * 4511 * 4624 * 3984 * * * 3091 2209 3404 2999 * 41 0 * * * * 0 * 2660 0 1000 V 42 2813 * * * * * * * * * * * 3593 * * * * 368 * * 42 0 * * * * * * 2749 0 0 K 43 2596 * * 4429 * * * * 957 * * * * 4541 4410 2761 4810 * * * 43 0 * * * * * * 2749 0 0 N 44 * * * * * * * 3424 1500 * * 3392 * 2830 2115 4633 4429 * * * 44 0 * * * * * * 2749 0 0 D 45 3424 * 258 3827 * * * * * * * * * * * * * * * * 45 0 * * * * * * 2749 0 0 H 46 * 3424 * * * * 674 * * * * 3435 2761 * * * * * * 4633 46 0 * * * * * * 2749 0 0 D 47 * * 2021 3494 * * * * * * * 3424 2753 * * 2212 2269 * * * 47 0 * * * * * * 2749 0 0 F 48 * * * * 640 * 3424 * * 2284 * 4059 * * * * * * * * 48 0 * * * * * * 2749 0 0 L 49 * * * * * * * * * 278 3435 * 3593 * * * * * * * 49 0 * * * * * * 2749 0 0 E 50 * * 658 1448 * * * * * * * * * * * * * * * * 50 0 * * * * * * 2749 0 0 K 51 2670 * * * * * * * 1942 * * 4059 3247 4410 2364 * 3593 3424 * * 51 0 * * * * * * 2749 0 0 D 52 * * 140 * * * * * * * * * * * * 3435 * * * * 52 230 * 2761 * * * * 2749 0 0 L 53 1478 * * * * * * * * 4081 * * 4177 3779 * 1396 * 3756 * * 53 0 * * * * 0 * 2512 0 1108 V 54 * * * * 4410 * * 2030 * 707 4583 * * * * * * 4224 * * 54 0 * * * * * * 2749 0 0 E 55 * * 3084 2009 * * 4114 * 4448 * * 3435 * 1785 2761 * * * * * 55 0 * * * * * * 2749 0 0 P 56 1926 * * * * * * * * * * * 4224 * * 549 * * * * 56 0 * * * * * * 2749 0 0 L 57 * * * * * * * * * 140 * * * * * * * 3435 * * 57 0 * * * * * * 2749 0 0 C 58 * 1629 * * 2753 * * 2108 * * * 2761 * * * * * * * 2749 58 0 * * * * * * 2749 0 0 R 59 * * * * * * * * 3424 * * * * * 141 * * * * * 59 0 * * * * * * 2749 0 0 R 60 * * * * * * * * * * * * * * 0 * * * * * 60 0 * * * * * * 2749 0 0 L 61 * * * * * * * 2131 * 374 * * * * * * * * * * 61 0 * * * * * * 2749 0 0 N 62 * 4133 3978 2533 * * 3460 * * * 4466 1456 * 3940 4401 3418 * * * * 62 0 * * * * * * 2749 0 0 T 63 4546 * * * * * * 2791 * 3548 * * * * * * 721 3054 * * 63 0 * * * * * * 2749 0 0 L 64 * * * * * * * * * 0 * * * * * * * * * * 64 0 * * * * * * 2749 0 0 N 65 * * * * * * * * * * * 0 * * * * * * * * 65 0 * * * * * * 2749 0 0 K 66 * * * * * * * * 1008 * * * * 3548 1703 3940 4466 * * * 66 0 * * * * * * 2749 0 0 C 67 * 87 * * * * * * * * * * * * * 4101 * * * * 67 0 * * * * * * 2659 0 0 A 68 833 * * * * 4286 2622 * * * 3385 * * * * * * 2954 * * 68 0 * * * * * * 2659 0 0 S 69 4286 * * 2296 * * 3820 * 2773 4523 * 4284 * * * 2658 2161 4289 * * 69 0 * * * * * * 2659 0 0 M 70 * * * * * * * 3341 * 3820 361 * * * * * 4263 * * * 70 0 * * * * * * 2659 0 0 K 71 * * * * * * * * 465 * * * * * 1859 * * * * * 71 0 * * 0 * * * 2055 0 0 //