HHsearch 1.5 NAME d2f1fa2 FAM FILE d2f1fa2 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d2f1fa2.a3m DATE Tue Mar 9 21:29:50 2010 LENG 86 match states, 86 columns in multiple alignment FILT 103 out of 124 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.9 EVD 0.4292 0.6695 SEQ >ss_dssp CCCEEEEEEEEEEEECCTHHHHHHHHHHHHTTCEEEEECSSEEEEEEEECHHHHHHHHHHHTTTSEEEEEEECCCEEEESTTCCCC >sa_dssp EDEDCDDBDADADADBEEEBCDCADDBBEECECDCDDEDEDCBBACAEBDCDDADDABECAEEDBECDEDDDDDEEEEDEEEDEEE >ss_pred CCCCCEEEEEEEEEECCHHHHHHHHHHHHHHCCEEEEECCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCC >ss_conf 98642336899998548122799999999749589986498699999369789999999973108179997625233413870359 >Consensus xxpxVeRElxLiKVxxxxxxrxeixxlxxxfrakIVDvxxxsxiiExTGxxxkidafixxlxxxGxIxEixRTGxvAlxRgxxxxk >d2f1fa2 QGAHVEREIMLVKIQASGYGRDEVKRNTEIFRGQIIDVTPSLYTVQLAGTSGKLDAFLASIRDVAKIVEVARSGVVGLSRGDKIMR >UniRef50_Q2LXP0(84-162:166) Acetolactate synthase small subunit n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LXP0_SYNAS E=3e-07 s/c=0.71 id=22% cov=90% ------REMMLIGLRITPDRYAELLQAVNTFGCRIIGMQPDYYIIETSGRRSENDAVFKYFQTF-DVEMMNRTGSIALPRHPQ--- >UniRef50_C6VV62(87-164:177) Acetolactate synthase, small subunit n=2 Tax=Flexibacteraceae RepID=C6VV62_DYAFD E=8e-05 s/c=0.62 id=22% cov=91% -------EIALFKVSTPiGAKPLDIETINKTYKAWVVYWHLTYVIIQKTGTEEEIFEFFDYIKPH-EILEFVRSGRVAVSKSPQTL- >UniRef50_Q64BR8(75-156:156) Acetolactate synthase small subunit n=3 Tax=environmental samples RepID=Q64BR8_9ARCH E=4e-13 s/c=0.93 id=22% cov=93% ------RDLSLLKVHVkDSKARSEVMQLAESYNAKIVDATLDSVTLELTETPKRIDRFVDLMNHFG-LKQLFRTGITAIGTGSETEK >UniRef50_Q02CM3(78-162:173) Acetolactate synthase, small subunit n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02CM3_SOLUE E=3e-15 s/c=0.97 id=27% cov=98% --PAVIRELVLLRIRTTQESRTAVLKEAEIFGGRVVDSSTEGFAIEVTGDPEKLGEFIDVMGSYGEV-EVTRSGALAIALESKKLR >UniRef50_D0RPV0(99-179:186) Acetolactate synthase, small subunit n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RPV0_9RICK E=1e-10 s/c=0.84 id=21% cov=93% ------RELALVKFIGEGEILQKAEQLCVDNKFEFLDKTSKSFIVQALGLRTEIDEFIKKIKALGTVS-ISRTGALAMKKGSETVK >UniRef50_D1QVH9(90-164:185) Acetolactate synthase, small subunit n=1 Tax=Prevotella oris F0302 RepID=D1QVH9_9BACT E=3e-08 s/c=0.80 id=23% cov=86% -------EVAIYKIATPVLmKNSEVSRTIRKHDARMLEVNPTYTTVLLNGLTEDIISLYNQLDAFDCILQYTRSGRIAVTR------ >UniRef50_C0WEL9(79-164:166) Acetolactate synthase 3 regulatory subunit n=1 Tax=Acidaminococcus sp. D21 RepID=C0WEL9_9FIRM E=5e-17 s/c=1.03 id=28% cov=100% EAPYVSYELAMVKVKCPtPTIRCELSNLAELFHAKIVDVQPESLVFRITGREDHVEATLIMLCQY-EILEIARTGQISLSRGLIPLK >UniRef50_A6QBB0(86-159:159) Acetolactate synthase, small subunit n=16 Tax=Epsilonproteobacteria RepID=A6QBB0_SULNB E=3e-09 s/c=0.85 id=23% cov=87% ----VEKEMVLIKFPI-AENLSDIQALCGAYNGGIVNVGKEMVIAQVADEPKRIKHFIEAAQRYNP-CETVRGGVVAIER------ >UniRef50_Q2LXP3(87-157:157) Acetolactate synthase small subunit n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LXP3_SYNAS E=5e-08 s/c=0.83 id=22% cov=84% ------REMILIRMPMTGENHEKIMEIVDRYHGEVIETGSGYGILELTGKKEDMDNALSSLELLG-IDDFVRTGSVTL-------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * Q 1 * * * 756 * * * * * * * * * 1293 * * * * * * 1 0 * * * * * * 2393 0 0 G 2 2581 * * * * 573 * * * * * 2639 * * * * * * * * 2 0 * * * * * * 2542 0 0 A 3 3065 * * * * * * * * * * * 468 * * 2664 * * * * 3 0 * * * * * * 3589 0 0 H 4 5126 4330 * * 2601 * 1939 * * 4223 * 4293 5993 * * 2030 5918 * * 3128 4 38 5270 * 1000 1000 * * 4034 1000 0 V 5 6242 * * * * * * 2254 * 4258 * * * * * * 6574 485 * * 5 0 * * * * * * 4692 0 0 E 6 5099 4497 4410 1122 5333 * 5592 5214 6241 5791 * 4781 * 3398 7077 3842 4406 * * 4043 6 0 * * * * * * 4711 0 0 R 7 * * * * * * * * 3454 * * * * 4271 327 * 6221 5621 * 5265 7 0 * * * * * * 4995 0 0 E 8 6724 * 3774 218 * 5006 * * * * * * * 6098 6386 * * * * * 8 0 * * * * * * 5102 0 0 I 9 * * * * * * 5220 3413 * 774 2303 * * * * 4961 5079 5049 * * 9 0 * * * * * * 5102 0 0 M 10 1480 5234 * * * * * 4420 * 2695 2559 * * * * 5106 5521 2371 * * 10 0 * * * * * * 5102 0 0 L 11 * * * * 6273 * * 4236 * 163 5166 * * * * * 6276 * * * 11 0 * * * * * * 5102 0 0 V 12 5085 * * * 4253 * * 1352 * 3059 4397 * * * * * 6115 1916 * 3651 12 0 * * * * * * 5102 0 0 K 13 6276 * * * * 6026 * * 242 * * * * 6965 3922 6373 4636 * * * 13 0 * * * * * * 5102 0 0 I 14 * * * * 3854 * * 2020 * 3105 4981 * * * * * * 898 * * 14 8 7547 * 0 * * * 5102 1000 0 Q 15 2858 * 5556 5133 6688 4567 4853 5686 2937 * * 4339 4077 4371 2498 2869 5727 3852 * 5903 15 49 5581 6293 0 * * * 5102 1477 0 A 16 1575 3666 * * 6677 5121 * 3329 * 6384 5667 5063 7515 * * 4097 2799 2848 * 4660 16 53 6236 5447 0 * * 0 5161 1000 1000 S 17 4759 * 2382 3370 * 5198 5521 * 3463 * * 2648 2806 6626 * 3388 3128 6343 * * 17 146 4120 4680 0 * 0 * 5108 2363 1678 G 18 2735 * 4467 4162 * 2473 6849 5815 5483 6727 * 5835 2536 4918 3823 3398 3916 4171 * * 18 62 4562 * 0 * 563 1630 5146 1886 2040 Y 19 3204 * 4314 2087 * 4874 * 4598 3994 3625 * 3522 6312 3749 5089 3430 4000 5825 * 6596 19 49 4917 * 0 * 0 * 5098 1725 1000 G 20 4169 * 3998 3750 * 5076 * 4191 3307 * 6391 2394 * 3058 6029 3372 2865 4763 * 6184 20 9 7283 * 0 * * * 5102 1000 0 R 21 * * * 6233 * * 5148 6082 4358 3520 5659 4122 4761 5464 695 6317 * * * 4608 21 15 6610 * 0 * * * 5102 1000 0 D 22 2302 6350 4110 5000 * 3708 5268 * 5121 4536 6334 4868 4849 3930 4258 2105 3775 5902 * * 22 19 6283 * 2322 322 * * 5102 1000 0 E 23 3363 * 2784 1058 * 7268 5713 * 3743 * * 6349 4978 3491 5739 5292 * * * * 23 0 * * * * * * 5105 0 0 V 24 3380 * * 6113 * * * 1077 * 3176 * * * * * * * 1766 * 6524 24 0 * * * * * * 5105 0 0 K 25 6625 6019 6071 3283 4253 * * 3397 4840 1713 3360 4013 * 4814 4987 4644 4972 3809 * * 25 0 * * * * * * 5105 0 0 R 26 3397 * 3464 2136 * 5498 7343 * 4141 6349 * 2925 * 2614 3218 6913 4310 6071 6193 * 26 0 * * * * * * 5105 0 0 N 27 4089 * * 6384 6136 * * 1630 * 1322 5000 5399 * 5652 6113 * 4354 4394 * 7309 27 0 * * * * * * 5105 0 0 T 28 1591 2781 * * 6719 5398 * 3145 6943 5232 * 5394 * 7234 * 4606 3262 2592 * * 28 0 * * * * * * 5105 0 0 E 29 4424 6334 2392 2215 * 5120 7217 * 3758 * * 2833 * 3558 3204 4291 5516 5711 * * 29 0 * * * * * * 5105 0 0 I 30 3189 * 4951 4560 * 5247 5659 1641 4892 2817 4695 7074 5448 5441 5750 5151 4496 3468 * * 30 15 * 6619 * * * * 5105 0 0 F 31 6101 * * * 613 * 4392 * * 4614 * 4983 * * * 6235 * * * 2334 31 21 * 6101 * * * 0 5100 0 1000 R 32 * * 3594 6688 * 2952 3057 * 3286 * * 3154 * * 1211 6479 * * * * 32 0 * * * * 1019 981 5089 0 1558 G 33 899 3906 * * 5138 1881 * * * 5878 * * 6122 * * 5582 * 4483 * * 33 0 * * * * 0 * 5094 0 1000 Q 34 5556 * * 3949 * 5486 4533 * 1370 6019 * 3636 * 4402 2079 4865 6619 5413 6180 * 34 0 * * * * * * 5105 0 0 I 35 4745 * * * 5711 * * 1130 * * 5683 * * * * * 4366 1256 * * 35 0 * * * * * * 5105 0 0 I 36 5654 7278 * * * * 6347 2477 * 2654 6306 * * 6071 * 6295 6820 801 * * 36 0 * * * * * * 5105 0 0 D 37 6524 * 403 3977 * 5345 * * * * * 3915 * * * 6798 4718 5827 * 6180 37 0 * * * * * * 5105 0 0 V 38 4351 * 6382 6619 6571 * * 2651 5711 4277 4005 * * 6137 * 4857 5163 959 6180 5553 38 0 * * * * * * 5105 0 0 T 39 3288 6625 4722 6794 * 2827 5277 * 5386 * * 4216 * 5192 5287 1835 1998 * * 6324 39 0 * * * * * * 5105 0 0 P 40 4656 * 4293 2588 * * 6073 6382 3341 3895 6018 4599 2198 3972 4004 3437 4412 6619 * * 40 0 * * * * * * 5105 0 0 S 41 6989 * 2015 1702 * 5750 4615 * 2985 * * 3667 * 6306 6025 3889 4039 5918 * * 41 0 * * * * * * 5105 0 0 L 42 4021 * 7302 * 4729 5543 * 6519 * 6627 5486 4744 * 5535 5212 1233 2352 * 5918 3240 42 17 6382 * 0 * * * 5105 1000 0 Y 43 4886 6168 * * 3411 5750 * 2618 * 1811 3261 * * * * * 4221 2590 * 3881 43 0 * * * * * * 5105 0 0 T 44 6384 * * * 6219 * * 1669 * 6395 4315 * * * * 6657 1486 2113 * * 44 0 * * * * * * 5105 0 0 V 45 5486 * * * 3188 * * 1237 * 2192 5517 * * * * * * 2300 * * 45 0 * * * * * * 5105 0 0 Q 46 * 6657 * 455 * * * * * 5683 5739 * * 2636 5338 5330 6398 * * * 46 0 * * * * * * 5105 0 0 L 47 3189 6571 * * 4395 * * 2635 3871 1810 4183 * * * * 6733 4487 2259 * * 47 0 * * * * * * 5105 0 0 A 48 3836 6202 * * * * * 6425 * 5711 * 4841 * * * 3074 563 4179 * * 48 0 * * * * * * 5105 0 0 G 49 3818 * 3977 5952 * 268 * * * 5739 * * * * * * * * * * 49 0 * * * * * * 5105 0 0 T 50 4299 * 2354 3586 * 6136 3948 * 3952 4244 * 3871 5817 7485 3587 3164 2593 6930 * 6219 50 0 * * * * * * 5105 0 0 S 51 4889 7217 6794 3141 * 7401 6334 7853 4699 7191 * 6420 1827 3781 3094 2519 4044 4870 * 5918 51 0 * * * * * * 5105 0 0 G 52 4854 * 2557 2402 * 3048 6239 * 3955 6733 * 5024 * 3196 4526 2851 4755 5309 * 6136 52 0 * * * * * * 5105 0 0 K 53 5739 * 4252 2896 * * 5338 * 744 * * 6219 * 4790 3214 * * 6019 * * 53 0 * * * * * * 5105 0 0 L 54 * * * * * * * 1033 * 2341 4485 4431 * * * * 4061 2615 * * 54 24 * 5923 * * * * 5105 0 0 D 55 4985 * 1302 2805 6173 6373 * 4320 4840 * 6061 3409 * 3854 4730 5853 4177 5618 * * 55 0 * * * * 963 1038 5106 0 1420 A 56 1100 * 3910 3841 * 4106 5480 * 5017 6320 6198 4106 * 6733 5036 3185 5058 5523 * * 56 26 * 5811 * * * 0 5107 0 1000 F 57 4277 6377 * * 1133 * * 4730 * 1821 3862 * * * * * 5371 4290 * 5989 57 0 * * * * 0 * 5097 0 1778 L 58 * 7302 * 3721 3892 * * 1475 5522 1812 6035 * * 3784 * * * 3972 * 4935 58 0 * * * * * * 5105 0 0 A 59 3706 * 2620 2165 * 5531 * 6353 2690 * 6977 4130 * 3611 4203 3416 4839 5708 * * 59 0 * * * * * * 5105 0 0 S 60 3441 * 6239 5269 * * * 4850 4234 1642 3578 5627 * 5143 5556 3979 5398 2388 * 5112 60 0 * * * * * * 5105 0 0 I 61 4481 6398 * * 4157 * * 3500 * 797 2596 * * 7031 * * * 4314 * * 61 30 * 5617 * * * * 5105 0 0 R 62 5789 6340 5246 2345 * 4459 * 6681 2150 4654 5709 5101 * 3138 2748 3362 5782 * * * 62 0 * * * * 0 * 5098 0 1577 D 63 4697 * 3799 3316 * 5728 4869 * 3087 5750 * 4440 1346 4005 5486 4408 5122 * * * 63 16 * 6524 * * * * 5105 0 0 V 64 * * * 6412 1464 * 4602 5515 4844 3332 * * 6876 6708 * 6818 * 4839 * 1447 64 339 * 2254 * * 0 * 5102 0 1000 A 65 6271 * 4681 * 6501 327 * 5601 6399 * * 4452 * * * 5444 6216 * * 5317 65 1438 * 665 * * 0 * 4902 0 4061 K 66 * 4660 3081 2159 * 4287 * 5643 3111 3359 * 3332 3951 4442 * 5250 4160 4581 * * 66 194 4613 3558 494 1787 0 * 5054 1402 4285 I 67 * * * * * * * 416 * 4427 * * * * * * * 2295 * * 67 104 * 3850 * * 0 * 4990 0 1897 V 68 5831 4765 5683 3935 * * * 4248 2783 1463 5865 * * 5332 3588 4733 5191 3183 * * 68 55 * 4733 * * 0 * 5068 0 2732 E 69 6324 * 4133 382 * * * * * * 5036 6549 * 3157 * 6676 * * * * 69 0 * * * * 0 * 5011 0 1478 V 70 5197 5559 * * 3617 * * 2080 * 2315 2848 * * * * * 5453 2132 * 4553 70 0 * * * * * * 5090 0 0 A 71 1415 4653 6608 * 5947 * 6965 3602 * * 6276 6034 * 5665 * 3479 3313 2119 * * 71 0 * * * * * * 5090 0 0 R 72 * * * 6727 * * * * 4144 * * * * 4841 204 5771 6314 * * * 72 0 * * * * * * 5090 0 0 S 73 * * * * * 5453 * * * * * * * * * 1437 718 * * * 73 0 * * * * * * 5090 0 0 G 74 5768 * * * * 27 * * * * * * * * * * * * * * 74 0 * * * * * * 5090 0 0 V 75 3711 * * 5469 * * * 2985 3452 4534 5066 * 5641 3679 2197 3854 4277 2638 * 6297 75 0 * * * * * * 5090 0 0 V 76 4509 * * * * * * 1649 * 3601 4578 * * * * 4823 2937 1527 * * 76 0 * * * * * * 5090 0 0 G 77 383 6655 * * * 3330 * 6743 * 6561 * * * * * 3949 5741 5594 * * 77 0 * * * * * * 5090 0 0 L 78 * * * * 5902 * * 2185 * 1155 2144 * * 6331 * * * 3721 * * 78 0 * * * * * * 5090 0 0 S 79 2771 * * 2692 * 4412 6787 6712 3847 5038 5880 4832 3817 3875 3953 3161 2898 4992 * * 79 0 * * * * * * 4972 0 0 R 80 * * * * * * * * 3398 5019 * * * * 223 * 5829 * * * 80 0 * * * * * * 4963 0 0 G 81 5065 * 4791 3687 * 493 5218 * * 5081 * * * * * 3944 5368 * * * 81 0 * * * * * * 4519 0 0 D 82 3789 * 2866 2672 5858 5347 * 6624 5871 5677 * 5502 1870 5215 * 2816 3635 * * * 82 0 * * * * * * 4512 0 0 K 83 4756 * * 2889 * * 3604 5347 1419 * * 4809 * 2660 3418 5005 6112 6131 * * 83 0 * * * * * * 4398 0 0 I 84 5688 5371 5445 * * * * 2823 4931 3870 5677 * 3099 * * 2904 1769 2968 * * 84 0 * * * * * * 4287 0 0 M 85 * * * 4355 * * * 3232 * 1402 3446 3004 * * * 4825 * 2220 * * 85 0 * * * * * * 4177 0 0 R 86 * * * * * * * * 625 * * * * * 1508 * * * * * 86 0 * * 0 * * * 3691 0 0 //