HHsearch 1.5 NAME d2epra1 FAM FILE d2epra1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d2epra1.a3m DATE Tue Mar 9 01:46:36 2010 LENG 35 match states, 35 columns in multiple alignment FILT 101 out of 10404 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.4 EVD 0.5293 3.5609 SEQ >ss_dssp CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCC >sa_dssp EEEEDCDBEEDEEECEEEEDBDECDEECDEEEEEE >ss_pred CCCCCEECCCCCCEEEEHHHCCEEEEECCCCCCCC >ss_conf 97685560734877701211504243138785898 >Consensus rxeKxyxCxxCgkxFxxxxxLxxHxxxHtgekPyt >d2epra1 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS >UniRef50_UPI00017610AA(333-368:672) PREDICTED: similar to zinc finger protein 595 n=1 Tax=Danio rerio RepID=UPI00017610AA E=9e-05 s/c=1.33 id=33% cov=103% RGDKNsFTCTQCGKSYGSKDYLKIHMMIHTGEKLFT >UniRef50_Q0V9N9(288-321:409) Putative uncharacterized protein MGC146454 n=1 Tax=Xenopus (Silurana) tropicalis RepID=Q0V9N9_XENTR E=0.0002 s/c=1.38 id=34% cov=100% RRDRPYQCSQCEKSFSEVSRFLRHQVGHTGGRPY- >UniRef50_UPI0000DB7CF5(329-362:576) PREDICTED: similar to CG1832-PA, isoform A n=2 Tax=Apocrita RepID=UPI0000DB7CF5 E=3e-05 s/c=1.47 id=34% cov=100% QAEKPFHCNVCDGTFSRYSSLWSHKRLHSGDKPF- >UniRef50_UPI00006A1C15(39-70:368) UPI00006A1C15 related cluster n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A1C15 E=0.0004 s/c=1.43 id=33% cov=94% --EKLYLCSECGSCFTNNADLVAHQRVHTEEKAY- >UniRef50_Q8NI51(481-515:663) Transcriptional repressor CTCFL n=46 Tax=Chordata RepID=CTCFL_HUMAN E=3e-06 s/c=1.51 id=28% cov=103% KNEKRFKCKHCSYACKQERHMTAHIRTHTGEKPFT >UniRef50_Q1KV11(75-109:126) Odd-skipped (Fragment) n=2 Tax=Tribolium castaneum RepID=Q1KV11_TRICA E=4e-06 s/c=1.49 id=33% cov=103% KPKRQFICKYCNRQFTKSYNLLIHERTHTDERPYS >UniRef50_B2A9H6(74-102:863) Predicted CDS Pa_1_300 n=1 Tax=Podospora anserina RepID=B2A9H6_PODAN E=8e-05 s/c=1.66 id=33% cov=86% -----HRCSVCFKTYKRREHLQRHRGTHTSERPH- >UniRef50_Q3URU2(845-877:1571) Paternally-expressed gene 3 protein n=6 Tax=Muroidea RepID=PEG3_MOUSE E=0.0004 s/c=1.38 id=32% cov=97% RRAKFFECQECGEAFARRSELIEHQKIHDRERP-- >UniRef50_UPI0000D56782(871-905:1493) PREDICTED: similar to schnurri CG7734-PA n=1 Tax=Tribolium castaneum RepID=UPI0000D56782 E=0.0005 s/c=1.30 id=31% cov=103% RGRGRYVCDQCGIRCKKPSMLKKHIRTHSNDRPYT # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * R 1 * * * * * * * * 1997 * * * * 2665 757 * * * * * 1 0 * * * * * * 4554 0 0 T 2 3902 * 5799 4556 * 2037 5281 3695 5629 * * 3877 4212 5414 4606 4528 2625 3135 * * 2 0 * * * * * * 4776 0 0 R 3 5881 * 3829 842 * * * 4828 3598 * * 5777 * 3675 3320 * 6081 5289 * * 3 0 * * * * * * 5156 0 0 K 4 6041 * * * * 5981 * * 589 * * * * 5889 1869 6207 * * * * 4 0 * * * * * * 5403 0 0 Q 5 5378 * * * * 5060 * * 3728 5383 5434 3615 1183 3744 3334 3269 5398 * * * 5 13 6808 * 0 * * * 5403 1000 0 V 6 * * * * 2173 * 2260 * * 6056 * 6422 4650 * 6103 * * 6521 * 1067 6 0 * * * * * * 5408 0 0 A 7 4298 6576 6945 3104 6985 5755 5472 3521 2184 6713 5266 * 4531 3274 5390 4011 4115 3229 * 5282 7 0 * * * * * * 5412 0 0 C 8 * 44 * * * * * * * * * * * * * 5057 * * * * 8 13 6775 * 1000 1000 * * 5700 1000 0 E 9 5874 * 3322 3545 * 3263 4371 * 2543 * * 3455 3283 3777 6286 3192 3911 * 6858 6787 9 0 * * * * * * 5700 0 0 I 10 5959 * 3361 2675 5068 * 4133 2641 4248 3597 4567 * * 3517 * * 5517 3028 * 3764 10 11 6991 * 1000 1000 * * 5700 1000 0 C 11 * 115 * * 5284 * * * * * * * * * * * * * * 4297 11 0 * * * * * * 5548 0 0 G 12 5860 * 3912 3976 * 966 4761 * 5009 4587 * 3998 4260 4639 5715 4623 * * 7039 6791 12 0 * * * * * * 5548 0 0 K 13 4403 6917 * 4784 6308 6548 6655 5590 730 * 5917 * * 5611 2866 6718 6714 * * 4111 13 0 * * * * * * 5548 0 0 I 14 2517 3930 5524 5955 * 3611 * 6262 3875 5116 6286 5732 * 5263 3260 2748 2638 4098 * * 14 0 * * * * * * 5548 0 0 F 15 6387 4316 * * 363 * * * * 4346 * * * * * 6628 5470 5630 * 4096 15 0 * * * * * * 5548 0 0 R 16 3147 5708 6979 * 4870 6995 5398 6072 2745 6429 * 4416 4766 6286 2937 2247 2843 5251 * 6024 16 0 * * * * * * 5548 0 0 D 17 * * 4503 5953 6356 * 4336 6631 4985 4677 5947 5462 4963 2228 2229 3040 3584 6624 4472 4668 17 0 * * * * * * 5548 0 0 V 18 3827 * * 5960 5935 6356 6655 4382 2377 6923 5123 4528 4265 4349 3719 1829 4282 4892 * 6548 18 0 * * * * * * 5548 0 0 Y 19 4048 5513 4013 3080 5913 3833 4259 6803 5857 * * 6697 6308 5122 5239 1434 3907 6632 5763 5076 19 0 * * * * * * 5548 0 0 H 20 3623 6394 4248 5064 5016 5380 1874 * 5103 5190 6644 3094 * 4617 4678 3724 3997 6655 * 3554 20 0 * * * * * * 5548 0 0 L 21 * 5016 * * 4065 * * * 5763 423 4944 * * 6552 4040 * * 5047 * 6538 21 0 * * * * * * 5548 0 0 N 22 4937 * 6754 3618 * 6484 6388 3924 2316 4674 * 3539 * 3167 2938 4638 3272 4521 5469 6629 22 0 * * * * * * 5548 0 0 R 23 4202 6118 4829 3613 5570 6591 5932 3075 3244 5290 * 5968 * 3747 2532 4418 4164 2729 * * 23 0 * * * * * * 5548 0 0 H 24 * 4104 * * * * 86 * * * * * * * * * * * * * 24 0 * * * * * * 5548 0 0 K 25 5883 5732 * 3296 5760 * 5516 3858 3204 3500 2334 * * 2855 3848 4814 6682 3989 * 4572 25 0 * * * * * * 5548 0 0 L 26 5284 * * 6395 4726 * 4891 3843 2730 3674 5344 4745 * 5726 1404 4292 5811 4157 * 6876 26 19 6292 * 0 * * * 5548 1469 0 S 27 5350 6118 * * * 5732 * 1740 4617 3846 6394 * * 6286 5532 3079 1980 3125 * * 27 0 * * * * * * 5548 0 0 H 28 * * * * * * 119 * * * * * * * 5553 * * * * 4104 28 0 * * * * * * 5548 0 0 S 29 4694 6480 * 6770 * 5313 5608 7117 * 6162 6496 4125 * 5785 5092 2059 976 6630 * * 29 15 * 6636 * * * * 5367 0 0 G 30 * * 4574 6508 * 611 * 5602 3267 * * 4374 5669 5364 5461 5202 6235 6321 * * 30 0 * * * * 0 * 5219 0 1000 E 31 4543 * 2614 970 6630 5563 6655 4085 5227 5178 * * * 4203 5631 5786 6558 5280 * * 31 0 * * * * * * 5229 0 0 K 32 * * * 5231 6291 6541 5967 * 1000 5754 * 5428 * 6414 1595 * 4340 * * * 32 15 6579 * 0 * * * 5224 1000 0 P 33 5533 * * 6464 * * 5961 * 5852 5054 * 4784 279 6186 6149 6014 * * * * 33 0 * * * * * * 5227 0 0 Y 34 * * * * 1246 * 3579 * * * * * * * * * * * 5907 1065 34 0 * * * * * * 5230 0 0 S 35 1999 * * * * * * * * * * * * * * 1560 1284 * * * 35 0 * * 0 * * * 4572 0 0 //