HHsearch 1.5
NAME  d2dloa1
FAM   
FILE  d2dloa1
COM   /bmm/www/servers/phyre/brandnew/HH/hhmake -i d2dloa1.a3m 
DATE  Mon Mar  8 15:54:07 2010
LENG  35 match states, 35 columns in multiple alignment
FILT  34 out of 38 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  2.8 
EVD   0.4196  1.5804 
SEQ
>ss_dssp
CCCCCSSCCBCTTTCCBCCSCCEEETTEEECTTTC
>sa_dssp
EDEEEDECDDADECEECAEEEDDECEEEACCCEDE
>ss_pred
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>ss_conf
94599999999851148999999992887788889
>Consensus
ExcyxxtlEkCxxCxxxIxdrilrAxGkxYHPxCF
>d2dloa1
EGCYVATLEKCATCSQPILDRILRAMGKAYHPGCF
>UniRef50_Q4SH61(447-478:586) Chromosome 8 SCAF14587, whole genome shotgun sequence. (Fragment) n=2 Tax=Tetraodon nigroviridis RepID=Q4SH61_TETNG  E=6e-09 s/c=1.93 id=48% cov=94%
---FQQSADKCNACGHLIMDMILQALGKSYHPGCF
>UniRef50_Q5C316(55-83:174) SJCHGC05784 protein (Fragment) n=1 Tax=Schistosoma japonicum RepID=Q5C316_SCHJA  E=0.0005 s/c=1.57 id=48% cov=83%
-------VEVCSNCHRPIGDRVVHALGMPYHPSCF
>UniRef50_Q8WUP2(233-267:373) Filamin-binding LIM protein 1 n=30 Tax=Eutheria RepID=FBLI1_HUMAN   E=3e-07 s/c=1.61 id=50% cov=103%
EPCYQDTLERCGKCGEVVRDHIIRALGQAFHPSCF
>UniRef50_UPI000194DA3A(195-229:336) PREDICTED: similar to filamin-binding LIM protein-1 n=1 Tax=Taeniopygia guttata RepID=UPI000194DA3A  E=3e-07 s/c=1.60 id=53% cov=103%
DTCFQATLEKCAKCQGLITEHIVHALGKGYHPSCF
>UniRef50_Q17099(365-399:508) AvL3-1 n=3 Tax=Onchocercidae RepID=Q17099_ACAVI   E=6e-07 s/c=1.59 id=44% cov=103%
EDDYIKSLEQCSSCGKPITEKLLRATGGVYHVDCF
>UniRef50_A7MBU7(290-324:431) Zgc:171680 protein n=7 Tax=Clupeocephala RepID=A7MBU7_DANRE   E=7e-07 s/c=1.58 id=44% cov=103%
EECYMSSLSVCSRCGERITDRVLKAMGQCFHAHCF
>UniRef50_UPI000155D203(223-252:463) PREDICTED: hypothetical protein n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155D203  E=1e-05 s/c=1.69 id=55% cov=89%
-----STIEKCMIMGYFLLERILQALGKSYHPGCF
>UniRef50_Q4RXM4(54-87:118) Chromosome 11 SCAF14979, whole genome shotgun sequence n=7 Tax=Tetraodontidae RepID=Q4RXM4_TETNG  E=3e-05 s/c=1.45 id=46% cov=100%
-DCYQASLELCWACGEAITDQVVRALERAYHVTCF
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
E 1    *	*	2751	232	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1
       0	*	*	*	*	*	*	2600	0	0	

G 2    2777	*	2731	2120	*	3043	3440	*	4427	*	*	4902	3023	*	*	*	4132	*	*	*	2
       0	*	*	*	*	*	*	2621	0	0	

C 3    *	415	2408	*	*	4015	*	*	*	*	*	*	*	*	*	*	*	*	*	*	3
       0	*	*	*	*	*	*	2621	0	0	

Y 4    *	*	*	*	2117	*	4081	*	*	*	*	*	*	*	*	*	*	*	*	493	4
       0	*	*	*	*	*	*	2747	0	0	

V 5    4679	*	*	*	*	*	4945	3169	4451	2791	3446	*	*	1045	*	*	5240	5354	*	*	5
       0	*	*	*	*	*	*	2776	0	0	

A 6    2028	*	2284	5049	*	4733	*	*	4722	*	*	2584	*	2803	*	2903	*	*	*	*	6
       0	*	*	*	*	*	*	2824	0	0	

T 7    4092	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1393	835	*	*	*	7
       0	*	*	*	*	*	*	2824	0	0	

L 8    2572	*	*	*	*	*	*	3482	*	560	*	*	*	*	*	*	*	3964	*	*	8
       0	*	*	*	*	*	*	2923	0	0	

E 9    *	*	2957	348	*	*	*	*	4888	*	*	*	*	*	*	4277	*	*	*	*	9
       0	*	*	*	*	*	*	2873	0	0	

K 10   4882	4897	*	*	*	*	*	*	955	4664	*	*	4574	4172	2792	*	4248	3592	*	*	10
       0	*	*	*	*	*	*	2873	0	0	

C 11   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	11
       0	*	*	*	*	*	*	2873	0	0	

A 12   2502	4301	*	*	3869	3717	*	*	*	*	4171	3604	*	*	*	1720	3731	*	3164	*	12
       0	*	*	*	*	*	*	2873	0	0	

T 13   2601	*	*	*	*	*	*	3366	2836	5419	*	3938	*	*	3432	4761	4655	1689	*	5051	13
       0	*	*	*	*	*	*	2873	0	0	

C 14   *	82	*	*	*	*	*	*	*	*	4171	*	*	*	*	*	*	*	*	*	14
       0	*	*	*	*	*	*	2873	0	0	

S 15   *	*	*	4177	*	1169	3390	*	4872	5671	*	3731	*	2497	*	3719	*	*	*	5477	15
       0	*	*	*	*	*	*	2873	0	0	

Q 16   4607	*	4574	2337	*	4458	2453	*	2562	3754	*	*	*	3594	3197	*	*	*	*	4171	16
       0	*	*	*	*	*	*	2873	0	0	

P 17   3586	*	*	*	3734	*	5051	*	4897	2162	*	*	1767	*	4277	*	3930	3083	5295	*	17
       0	*	*	*	*	*	*	2873	0	0	

I 18   *	*	*	*	*	*	*	204	*	4171	*	*	*	*	*	*	*	3717	*	*	18
       0	*	*	*	*	*	*	2873	0	0	

L 19   *	*	*	*	4888	3938	*	*	4574	2013	2572	*	*	*	4836	4512	1457	*	*	*	19
       0	*	*	*	*	*	*	2873	0	0	

D 20   *	*	796	1381	*	*	*	*	*	*	*	*	*	4632	*	*	*	*	*	*	20
       0	*	*	*	*	*	*	2873	0	0	

R 21   *	*	*	*	*	*	2459	*	3188	*	2976	*	*	3921	956	*	*	*	*	*	21
       0	*	*	*	*	*	*	2873	0	0	

I 22   *	*	*	*	*	*	*	807	*	3130	4175	*	*	*	*	*	*	1949	*	*	22
       0	*	*	*	*	*	*	2873	0	0	

L 23   *	*	*	*	*	*	*	3083	*	532	*	*	*	*	*	*	*	2392	*	*	23
       0	*	*	*	*	*	*	2873	0	0	

R 24   *	*	*	*	*	*	3493	*	3544	*	*	*	*	2070	768	*	*	*	*	*	24
       0	*	*	*	*	*	*	2873	0	0	

A 25   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	25
       0	*	*	*	*	*	*	2873	0	0	

M 26   *	4512	*	*	*	*	*	4897	*	1126	2493	*	*	*	*	*	1803	*	*	*	26
       0	*	*	*	*	*	*	2873	0	0	

G 27   *	*	*	3618	*	173	*	*	*	*	*	4990	*	*	*	*	*	*	*	*	27
       0	*	*	*	*	*	*	2873	0	0	

K 28   *	*	*	*	*	3631	*	*	1069	*	3938	4042	*	2633	3118	4632	*	*	*	*	28
       0	*	*	*	*	*	*	2873	0	0	

A 29   2000	3612	*	*	*	3542	*	*	*	*	*	*	2693	*	*	1708	4607	3631	*	*	29
       0	*	*	*	*	*	*	2873	0	0	

Y 30   *	*	*	*	2285	*	*	*	*	*	*	*	*	*	*	*	*	*	*	331	30
       0	*	*	*	*	*	*	2873	0	0	

H 31   *	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	31
       0	*	*	*	*	*	*	2873	0	0	

P 32   4277	*	*	*	*	*	*	*	*	*	*	*	272	*	*	*	*	3057	*	*	32
       0	*	*	*	*	*	*	2873	0	0	

G 33   5524	*	3682	4632	*	1949	2421	*	*	*	*	3685	4574	3430	4686	3018	4664	*	*	*	33
       0	*	*	*	*	*	*	2873	0	0	

C 34   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	34
       0	*	*	*	*	*	*	2873	0	0	

F 35   *	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	35
       0	*	*	0	*	*	*	2873	0	0	

//