HHsearch 1.5 NAME d2dkya1 FAM FILE d2dkya1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d2dkya1.a3m DATE Mon Mar 8 16:43:38 2010 LENG 78 match states, 78 columns in multiple alignment FILT 19 out of 23 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.4 EVD 0.4338 1.6042 SEQ >ss_dssp CCCCCSSSHHHHHHHHHHHHHHHHHHTCTTHHHHHHTTCCSCCHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTTTTC >sa_dssp EEEEDEEEDEECEECAEDBBECAEEDECDEBBEDCEEEEBDBECEDBDEEBEEDEEECCDCABECADCACEBCECDEE >ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >ss_conf 951013689998777899989999769847999976338887887863036678968889999999986457640169 >Consensus xxxxxxxxxxlxEieAxeACxWLraaGFpqYAqxyeDxqFPIdixxVkxDhxfLdxDxlxSLxRRLxtLNkCaxMkle >d2dkya1 MCRKKPDTMILTQIEAKEACDWLRATGFPQYAQLYEDFLFPIDISLVKREHDFLDRDAIEALCRRLNTLNKCAVMKLE >UniRef50_UPI00016E6E20(22-91:1052) UPI00016E6E20 related cluster n=2 Tax=Takifugu rubripes RepID=UPI00016E6E20 E=2e-24 s/c=1.61 id=66% cov=91% --------MLFAEIEAKEACDWLRAAGFPQYAQLFKDCGFPIDVDWAKRDHSFLDKDALDSLCRRLSTLNKCMEMRLE >UniRef50_Q9Y3M8(45-122:1113) StAR-related lipid transfer protein 13 n=25 Tax=Euteleostomi RepID=STA13_HUMAN E=9e-32 s/c=1.76 id=67% cov=101% LARHQLVTKIQQEIEAKEACDWLRAAGFPQYAQLYEDSQFPINIVAVKNDHDFLEKDLVEPLCRRLNTLNKCASMKLD >UniRef50_A8JR05(1375-1443:2351) Crossveinless c, isoform C n=40 Tax=Eumetazoa RepID=A8JR05_DROME E=5e-27 s/c=1.75 id=56% cov=90% ---------YLAEIEAVEACKWLRAAGFPQYAQMYEDHQFPIDLNNVAKDHTNLENDQLQSLYRRLCVLNRCATMRLD >UniRef50_UPI0001925BE9(12-76:825) PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001925BE9 E=1e-19 s/c=1.50 id=47% cov=82% ----------MIELEAFEACCWLKATGFSLFAKMYEEKCFPLEVGAVKIACNHLDVDSLQSLIKRLETLNKCA----- >UniRef50_B6IHN8(414-477:536) Putative uncharacterized protein n=1 Tax=Caenorhabditis briggsae RepID=B6IHN8_CAEBR E=4e-19 s/c=1.49 id=38% cov=83% ----------LSERDALDACSWLRKAGFSKYADQFEEGKLPIKPS----QDPTLPETDLRSLNRRIEILNKCHTMKVD >UniRef50_B3S7A6(122-182:1124) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S7A6_TRIAD E=2e-15 s/c=1.36 id=50% cov=79% ----------VTEKDAGEACQWLKFTGFSRYARAYEDGQFPIDIATVKKDNSFMDASSINAVIRRINLLNQ------- >UniRef50_UPI000186E7F2(3-44:969) Rho-type GTPase activating protein, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E7F2 E=7e-11 s/c=1.63 id=51% cov=55% ------------------------------------DLQFPIDVSGVQKDHPFLDKDSLQSLFRRLHALNRCAKMKID >UniRef50_C3XWH2(201-272:1247) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3XWH2_BRAFL E=5e-29 s/c=1.78 id=59% cov=94% ------EMMWLSELEAIDACKWLRDCGFPQYAQMYEDSCFPVDITSVETDHDFLDRDSIQSLIRRLRTLNRCASMRIE # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * 1000 1000 * * * * * * * * * 1 0 * * * * * * 1249 0 0 C 2 1000 1000 * * * * * * * * * * * * * * * * * * 2 0 * * * * * * 1249 0 0 R 3 * * * * * * * * * * * * * * 0 * * * * * 3 0 * * * * * * 1249 0 0 K 4 * * * * * * 1000 * 1000 * * * * * * * * * * * 4 0 * * * * * * 1249 0 0 K 5 * * * * * * * * 1000 * * * * 1000 * * * * * * 5 0 * * * * * * 1249 0 0 P 6 * * * * * * * * * 1000 * * 1000 * * * * * * * 6 0 * * * * * * 1249 0 0 D 7 * * 1662 1483 * * * * * * * * * * * * * 1615 * * 7 0 * * * * * * 1460 0 0 T 8 * * * * * * * * * * 1792 * * * * * 492 * * * 8 0 * * * * * * 1469 0 0 M 9 * * * * 2991 * * * 2803 * 452 * * * * * * * * * 9 0 * * * * * * 1658 0 0 I 10 * * * * 3465 * * 2298 * 1227 * * * * * * * * 2808 2875 10 0 * * * * * * 1780 0 0 L 11 * * * * 4043 * * 2842 * 1082 3216 * * 4076 * * * 2638 * * 11 0 * * * * * * 2406 0 0 T 12 1724 * 4159 * * * * 3306 * * * * * 4171 * 2224 1886 * * * 12 0 * * * * * * 2398 0 0 Q 13 * * * 218 * * * * 4210 * * * * 3532 * * * * * * 13 0 * * * * * * 2354 0 0 I 14 * * * * * * * 810 3301 2671 * * * * 2547 * * * * * 14 0 * * * * * * 2354 0 0 E 15 * * 1875 459 * * * * * * * * * * * * * * * * 15 0 * * * * * * 2354 0 0 A 16 0 * * * * * * * * * * * * * * * * * * * 16 0 * * * * * * 2354 0 0 K 17 4048 * * * 3369 3301 * 4053 1298 3399 * * * * 4417 * * 2915 * * 17 0 * * * * * * 2354 0 0 E 18 * * 2112 475 * * * * 4345 * * * * * * * * * * * 18 0 * * * * * * 2354 0 0 A 19 0 * * * * * * * * * * * * * * * * * * * 19 0 * * * * * * 2354 0 0 C 20 * 0 * * * * * * * * * * * * * * * * * * 20 0 * * * * * * 2354 0 0 D 21 * 3369 1461 4309 * * * * 2498 * * * * 3301 * 2547 4650 * * * 21 0 * * * * * * 2354 0 0 W 22 * * * * * * * * * * * * * * * * * * 0 * 22 0 * * * * * * 2354 0 0 L 23 * * * * * * * * * 0 * * * * * * * * * * 23 0 * * * * * * 2354 0 0 R 24 * * * * * * 4210 * 2334 * * * * * 420 * * * * * 24 0 * * * * * * 2354 0 0 A 25 584 * 4053 * 3301 * * * 2547 * * * * * * * * * * * 25 0 * * * * * * 2354 0 0 T 26 726 4053 * * * * * * * * * * * * * * 1577 * * * 26 0 * * * * * * 2354 0 0 G 27 * * * * * 0 * * * * * * * * * * * * * * 27 0 * * * * * * 2354 0 0 F 28 * * * * 0 * * * * * * * * * * * * * * * 28 0 * * * * * * 2354 0 0 P 29 * * * * * * * * * * * * 665 * * 1437 * * * * 29 0 * * * * * * 2354 0 0 Q 30 * * * * * * * * 2547 3369 * * * 665 3301 * * * * * 30 0 * * * * * * 2354 0 0 Y 31 * * * * 3369 * * * * * * * * * * * * * * 147 31 0 * * * * * * 2354 0 0 A 32 0 * * * * * * * * * * * * * * * * * * * 32 0 * * * * * * 2354 0 0 Q 33 * * 2547 * * * * * 3369 * * * * 665 3301 * * * * * 33 0 * * * * * * 2354 0 0 L 34 3301 * * * * * * * * 1141 1869 * * 2547 * * * * * * 34 0 * * * * * * 2354 0 0 Y 35 * * * * 1449 * * * * * * * * * * * * * * 658 35 0 * * * * * * 2354 0 0 E 36 * * 4309 313 * * * * 4513 * * * * * 4417 * 4210 * * * 36 0 * * * * * * 2354 0 0 D 37 * * 431 1953 * * * * * * * * * * * * * * * * 37 0 * * * * * * 2821 0 0 F 38 4845 3092 * * 4749 1936 3282 * 3509 2561 * * * * * 2807 4431 * * * 38 0 * * * * * * 2821 0 0 L 39 * 2537 * * * 4692 * * 2552 3162 * * * 1099 4650 * * * * * 39 0 * * * * * * 2821 0 0 F 40 * * * * 270 * * * * 2552 * * * * * * * * * * 40 0 * * * * * * 2821 0 0 P 41 * * * * * * * * * * * * 0 * * * * * * * 41 0 * * * * * * 2821 0 0 I 42 * * * * * * * 411 * 2911 * * * * * * * 3121 * * 42 106 * 3819 * * * * 2821 0 0 D 43 * * 637 3441 * * * 4382 3045 * * 3385 * * * * * * * * 43 0 * * * * * 0 2749 0 1000 I 44 * * * * * * * 1146 * 2975 * * 3045 * * * * 1738 * * 44 0 * * * * * 0 2749 0 1000 S 45 2963 * 3592 2906 * 2851 * * * * * 3946 * 4384 * 1724 4390 4223 * * 45 186 * 3045 * * 0 * 2749 0 1000 L 46 2296 * 4291 * * 4492 * 4511 * 4624 * 3984 * * * 3091 2209 3404 2999 * 46 0 * * * * * 0 2660 0 1000 V 47 2493 * * * * * * * * * * * * * * * * 282 * * 47 0 * * * * * 0 2660 0 1000 K 48 2472 * * 4386 * * * * 871 * * * * 4492 4351 3404 4751 * * * 48 0 * * * * * 0 2660 0 1000 R 49 * * * * * * * 3317 1316 * * 3323 * 3921 2045 4577 4386 * * * 49 0 * * * * 0 * 2660 0 1000 E 50 3509 * 423 3908 * * * * * * * * * 3327 * * * * * * 50 0 * * * * * * 2821 0 0 H 51 * 3509 3327 * * * 708 * * * * 3461 3819 * * * * * * 4690 51 0 * * * * * * 2821 0 0 D 52 * * 2071 3516 * * * * * * * 3509 2033 * * 2221 2966 * * * 52 0 * * * * * * 2821 0 0 F 53 * * * * 673 * 3509 * * 2962 * 4129 * * * * 3327 * * * 53 0 * * * * * * 2821 0 0 L 54 * * * * * * * * * 137 3461 * * * * * * * * * 54 0 * * * * * * 2821 0 0 D 55 * * 697 1819 * * * * * * * * 3327 * * * * * * * 55 0 * * * * * * 2821 0 0 R 56 2629 * * 3327 * * * * 1966 * * 4129 3277 4431 2410 * * 3509 * * 56 0 * * * * * * 2821 0 0 D 57 * * 305 * * * * * * * * * * * * 3461 3327 * * * 57 106 * 3819 * * * * 2821 0 0 A 58 1633 * 3045 * * * * * * 4223 * * 4382 3946 * 1609 * 4004 * * 58 0 * * * * 0 * 2749 0 1000 I 59 * * * * 4431 * * 2071 * 684 4607 * * * * * * 4262 * * 59 0 * * * * * * 2821 0 0 E 60 * * 3092 2053 * * 4120 * 4471 * * 3461 * 1848 2552 * * * * * 60 0 * * * * * * 2821 0 0 A 61 1926 * * * * * * * * * * * 4262 * * 546 * * * * 61 0 * * * * * * 2821 0 0 L 62 * * * * * * * * * 137 * * * * * * * 3461 * * 62 0 * * * * * * 2821 0 0 C 63 * 1662 * * 2789 * * 2156 * * * 2552 * * * * * * * 2790 63 0 * * * * * * 2821 0 0 R 64 * * * * * * * * 3509 * * * * * 133 * * * * * 64 0 * * * * * * 2821 0 0 R 65 * * * * * * * * * * * * * * 0 * * * * * 65 0 * * * * * * 2764 0 0 L 66 * * * * * * * 1955 * 430 * * * * * * * * * * 66 0 * * * * * * 2764 0 0 N 67 * 4160 3811 2449 * * 3523 * * * 4458 1491 * 4091 4390 3397 * * * * 67 0 * * * * * * 2764 0 0 T 68 4584 * * * * * * 2674 * 3497 * * * * * * 771 2975 * * 68 0 * * * * * * 2764 0 0 L 69 * * * * * * * * * 0 * * * * * * * * * * 69 0 * * * * * * 2764 0 0 N 70 * * * * * * * * * * * 0 * * * * * * * * 70 0 * * * * * * 2764 0 0 K 71 * * * * * * * * 995 * * * * 3497 1710 4091 4458 * * * 71 0 * * * * * * 2764 0 0 C 72 * 86 * * * * * * * * * * * * * 4104 * * * * 72 0 * * * * * * 2675 0 0 A 73 877 * * * * 4329 2392 * * * 3433 * * * * * * 3026 * * 73 0 * * * * * * 2675 0 0 V 74 4102 * * 2051 * * * * 4120 4335 * 3866 * * * 2409 1830 4175 * * 74 0 * * * * * * 2508 0 0 M 75 * * * * * * * * * * 101 * * * * * 3881 * * * 75 0 * * * * * * 2508 0 0 K 76 * * * * * * 3866 * 522 * * * * * 2090 * * * * * 76 0 * * * * * * 2508 0 0 L 77 * * * * * * * 2480 * 1042 3881 * * * * * * 1905 * * 77 0 * * * * * * 2508 0 0 E 78 * * 1095 911 * * * * * * * * * * * * * * * * 78 0 * * 0 * * * 2508 0 0 //