HHsearch 1.5 NAME d2axtz1 FAM FILE d2axtz1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d2axtz1.a3m DATE Sat Mar 13 01:48:27 2010 LENG 62 match states, 62 columns in multiple alignment FILT 10 out of 14 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.6 EVD 0.4361 0.6143 SEQ >ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC >sa_dssp EDEECDEBDDDCEECCEECEEDCDEBEEDEDDCDCBCCECEEBDDDDDDCDEDCDEBDEEDE >ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC >ss_conf 95999999999999999999973877516635210011363254799999999998456509 >Consensus MtixFQxxlxALvxxSfvlvvgVPVxxaspxxwxxskxlixxgsxxWxxLVxlvgilnxfVv >d2axtz1 MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSKQLIFLGSGLWIALVLVVGVLNFFVV >UniRef50_P73528(1-62:62) Photosystem II reaction center protein Z n=3 Tax=cellular organisms RepID=PSBZ_SYNY3 E=2e-18 s/c=1.50 id=71% cov=102% MSIVFQIALAALVLFSFVMVVGVPVAYASPQNWDRSKPLLYLGSGIWAILVIVVALLNFLVV >UniRef50_B0JLL9(1-62:62) Photosystem II reaction center protein Z n=20 Tax=cellular organisms RepID=PSBZ_MICAN E=1e-13 s/c=1.25 id=59% cov=102% MSIVFQFFLIALVLFSLLMVIGVPVAYASPQNWDQSKPLLYVGSAIWAILVVAVAILNFLVI >UniRef50_Q8YQ44(1-62:62) Photosystem II reaction center protein Z n=12 Tax=cellular organisms RepID=PSBZ_ANASP E=1e-11 s/c=1.14 id=71% cov=102% MTIIFQFALVALVLVSFVLVVGVPVAYATPQNWVESKKLLWLGSGVWIALVLLVGLLNFFVV >UniRef50_Q85FM4(1-61:62) Photosystem II reaction center protein Z n=3 Tax=Viridiplantae RepID=PSBZ_ADICA E=6e-11 s/c=1.12 id=52% cov=100% MTTAFQFALFALIATSFLLVVGVPVAFASPGGWSDNKNIVFSGASLWIGLVFLVGIPNSFI- >UniRef50_P56790(1-58:62) Photosystem II reaction center protein Z n=618 Tax=Eukaryota RepID=PSBZ_ARATH E=4e-10 s/c=1.14 id=53% cov=95% MTIAFQLAVFALIITSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIGLVFLVGILN---- >UniRef50_Q31KZ4(1-62:62) Photosystem II reaction center protein Z n=5 Tax=Chroococcales RepID=PSBZ_SYNE7 E=8e-07 s/c=0.88 id=57% cov=102% MVILFQLALLLLVVMSFVLIVGVPVLYATNGDRVQSNRLILVGGLAWTALVVLVGVLNYFVV >UniRef50_Q85FY1(1-61:62) Photosystem II reaction center protein Z n=1 Tax=Cyanidioschyzon merolae RepID=PSBZ_CYAME E=3e-06 s/c=0.87 id=39% cov=100% MSIILQILVVALIVYSFVLIVAVPITLSTASGWSKSKSSIVTASIGWVGMVLLTGVLNSFV- >UniRef50_P32095(5-61:65) Photosystem II reaction center protein Z n=1 Tax=Euglena gracilis RepID=PSBZ_EUGGR E=4e-06 s/c=0.92 id=40% cov=94% -TFTFQALVLALIIFSFILVLTLPVIFASPKGWENNKSRIWLACRFWFFLVFLIGILD---- >UniRef50_B0C0S7(1-62:62) Photosystem II reaction center protein Z n=1 Tax=Acaryochloris marina MBIC11017 RepID=PSBZ_ACAM1 E=4e-05 s/c=0.80 id=40% cov=102% MSVLFQLLIAAFVALSFAMIIGVPVVFSTGDASDDANKLIWGGAAAWVVLLFVAALASIVVI # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 2438 0 0 T 2 * * * * * * * * * * * * * * * 1169 1169 3178 * * 2 0 * * * * * * 2602 0 0 I 3 * * * * 2979 * * 634 * * * * * * * * 3563 2795 * * 3 0 * * * * * * 2602 0 0 L 4 2489 * * * * * * 2261 * 1634 * * * * * * 2979 2607 * * 4 0 * * * * * * 2602 0 0 F 5 * * * * 212 * * * * 2872 * * * * * * * * * * 5 0 * * * * * * 2602 0 0 Q 6 * * * * * * * * * * * * * 0 * * * * * * 6 0 * * * * * * 2602 0 0 L 7 2979 * * * 2020 * * 2245 * 1266 * * * * * * * * * * 7 0 * * * * * * 2602 0 0 A 8 992 * * * 3476 * * * * 1295 * * * * * * * * * * 8 0 * * * * * * 2602 0 0 L 9 * * * * * * * 2795 * 1003 * * * * * * * 1486 * * 9 0 * * * * * * 2602 0 0 A 10 1806 * * * 2489 * * 3476 * 2075 * * * * * * * 2261 * * 10 0 * * * * * * 2602 0 0 A 11 169 * * * * * * * * 3178 * * * * * * * * * * 11 0 * * * * * * 2602 0 0 L 12 * * * * 2795 * * * * 224 * * * * * * * * * * 12 0 * * * * * * 2602 0 0 V 13 * * * * * * * 1179 * * * * * * * * * 841 * * 13 0 * * * * * * 2602 0 0 I 14 2128 * * * * * * 1796 * 2082 * * * * * * * 2017 * * 14 0 * * * * * * 2602 0 0 L 15 * * * * 1781 * * * * 2240 3178 * * * * * 2489 3794 * 2872 15 0 * * * * * * 2602 0 0 S 16 * * * * * * * * * * * * * * * 0 * * * * 16 0 * * * * * * 2602 0 0 F 17 * * * * 292 * * * * 3476 * * * * * 3418 * * * * 17 0 * * * * * * 2602 0 0 V 18 2795 * * * * * * 2182 * 2519 * * * * * * * 1117 * * 18 0 * * * * * * 2602 0 0 M 19 * * * * * * * * * 680 1412 * * * * * * * * * 19 0 * * * * * * 2602 0 0 V 20 * * * * * * * 1354 * 3418 * * * * * * * 957 * * 20 0 * * * * * * 2602 0 0 I 21 * * * * * * * 1340 * 2979 * * * * * * * 1065 * * 21 0 * * * * * * 2602 0 0 G 22 2872 * * * * 637 * * * * * * * * * 3418 2979 * * * 22 0 * * * * * * 2602 0 0 V 23 * * * * * * * * * 2979 * * * * * * * 196 * * 23 0 * * * * * * 2602 0 0 P 24 * * * * * * * * * * * * 0 * * * * * * * 24 0 * * * * * * 2602 0 0 V 25 * * * * * * * 2872 * * * * * * * * * 212 * * 25 0 * * * * * * 2602 0 0 A 26 1364 * * * * * * 2979 * 3178 * * * * * * 2872 2073 * * 26 0 * * * * * * 2602 0 0 Y 27 * * * * 1155 * * * * 2872 * * * * * * * * * 1271 27 0 * * * * * * 2602 0 0 A 28 475 * * * * * * * * * * * * * * 1833 * * * * 28 0 * * * * * * 2602 0 0 S 29 * * * * * * * * * * * * * * * 898 1110 * * * 29 0 * * * * * * 2602 0 0 P 30 2872 * * * * 2795 * * * * * 3178 716 * * * * * * * 30 0 * * * * * * 2602 0 0 Q 31 * * 2073 * * 2357 * * 2979 * * * * 1719 * 2872 * * * * 31 0 * * * * * * 2602 0 0 D 32 2795 * 2490 * * 1179 * * * * * 2082 * * * * * * * * 32 0 * * * * * * 2602 0 0 W 33 * * * * * * * * * * * * * * 3178 2795 * * 424 * 33 0 * * * * * * 2602 0 0 D 34 * * 1412 2979 * * * * * * * * * * * 1668 * 2453 * * 34 0 * * * * * * 2602 0 0 R 35 * * 2128 3794 * * * * 2872 * * 2979 * 2319 2817 3418 * * * * 35 0 * * * * * * 2602 0 0 S 36 2795 * * * * * * * * * * 1713 * * * 860 * * * * 36 0 * * * * * * 2602 0 0 K 37 * * * * * * * * 424 * * 1974 * * * * * * * * 37 0 * * * * * * 2602 0 0 Q 38 * * * * * * * * 2210 * * 2489 2607 3888 3178 1925 * * * * 38 0 * * * * * * 2602 0 0 L 39 * * * * * * * 3563 * 841 * * * * 2979 2872 * 3418 * * 39 0 * * * * * * 2602 0 0 I 40 * * * * * * * 772 * 2082 * * * * * * * 2489 * * 40 0 * * * * * * 2602 0 0 F 41 * * * * 2025 * * * * 3178 * * * * * * * 2872 1544 2607 41 0 * * * * * * 2602 0 0 L 42 * * * * * 2795 * * * 1553 * * * * * 2489 2872 2319 * * 42 0 * * * * * * 2602 0 0 G 43 1925 * * * * 441 * * * * * * * * * * * * * * 43 0 * * * * * * 2602 0 0 S 44 2128 2979 * * * 3178 * * * * * * * * * 1183 3418 * * * 44 0 * * * * * * 2602 0 0 G 45 2096 * * * * 2225 * 2872 * 3178 * * * * 2979 2489 * * * * 45 0 * * * * * * 2602 0 0 L 46 1974 * * * 2979 2872 * 2607 * 2025 * * * * * * * 3794 * * 46 0 * * * * * * 2602 0 0 W 47 * * * * * * * * * * * * * * * * * * 0 * 47 0 * * * * * * 2602 0 0 I 48 2607 * * * 2979 * * 1654 * * * * * * * * 3178 1833 * * 48 0 * * * * * * 2602 0 0 A 49 1999 * * * 2979 1668 * 2607 * * * * * * * * * 2795 * * 49 0 * * * * * * 2602 0 0 L 50 * * * * * * * * * 212 2872 * * * * * * * * * 50 0 * * * * * * 2602 0 0 V 51 * * * * * * * * * 2795 * * * * * * * 224 * * 51 0 * * * * * * 2602 0 0 L 52 * * * * 1155 * * 3750 * 1856 * * * * * * * 2319 * * 52 0 * * * * * * 2602 0 0 V 53 3476 * * * * * * * * 680 * * * * * * * 1806 * * 53 0 * * * * * * 2602 0 0 V 54 2795 * * * * * * 2979 * * * * * * * * 2872 755 * * 54 0 * * * * * * 2602 0 0 G 55 1698 * * * * 532 * * * * * * * * * * * * * * 55 0 * * * * * * 2602 0 0 V 56 * * * * * * * 1340 * 1783 * * * * * * * 1668 * * 56 0 * * * * * * 2602 0 0 L 57 2795 * * * * * * * * 375 * * 3563 * * * * * * * 57 0 * * * * * * 2602 0 0 N 58 * * 2979 * * * * * * * * 456 * * * 2795 * * * * 58 0 * * * * * * 2602 0 0 F 59 * * * * 1393 * * 2504 * * * * * * * 1685 * * * 2921 59 0 * * * * * * 2374 0 0 F 60 * * * * 685 * * * * 2309 * * * * * * * 2504 * * 60 0 * * * * * * 2374 0 0 V 61 * * * * * * * 2851 * * * * * * * * * 215 * * 61 0 * * * * * * 2374 0 0 V 62 * * * * * * * 1303 * * * * * * * * * 749 * * 62 0 * * 0 * * * 1980 0 0 //