HHsearch 1.5 NAME d2auwa2 FAM FILE d2auwa2 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d2auwa2.a3m DATE Mon Mar 8 22:53:42 2010 LENG 84 match states, 84 columns in multiple alignment FILT 102 out of 130 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.0 EVD 0.4603 1.7929 SEQ >ss_dssp CCCCCEEEEEECSTTEEEEEETTSCEEEEECHHHHHHCGGGGGGGSHHHHTTCEECTTTCCEESSSCCBCHHHHHHHHHHHTTC >sa_dssp ECEBEBECBDCDEDCDADACADDECDCDADAAECAEEDEEBDEACDEEBAEEBDDBEEECBACBEECCBCCDDACDCACEDEEE >ss_pred CCCCEEEEEEECCCCEEEEEECCCCEEEEECHHHHHCCCCCHHHCCHHHHHEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCC >ss_conf 977415788983990999998499689999278730181014420964372078615764698257561768999998740287 >Consensus xxxPkixxVxxxxxyxLxvxFxdGxxxxxDlxxxlxxxxxFxxLxdxxxFxxvxvxxxgxxIxWxdxdixxdxLyxxaxxqagx >d2auwa2 YFFPKLTAVEALAPYRLRTTWSTGEVLEVDVGDILRKIPDLAPILDPEAFARVHIAEWEGSVEWFDTEFGRDNVYAWAKEQAGE >UniRef50_C5V7I3(4-82:88) Putative uncharacterized protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7I3_9PROT E=5e-05 s/c=0.62 id=27% cov=94% ---PDVTHVQTLASYELLVSFADGGKRRFSMLPYLH-YPAYQGLTQPGKFGLAHVSN--GTVAWSDEiDMSPDTLYLAGEEVSNE >UniRef50_C8W197(3-61:85) Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C8W197_DESAS E=7e-05 s/c=0.82 id=20% cov=71% ----KMLKVTPGDDYTLLVEFEHGNSILFHMKDLIETMP-YSSLKDLSRFKDITLEE--KAIRWPD------------------ >UniRef50_Q13DQ2(7-90:96) Putative uncharacterized protein n=2 Tax=Rhodopseudomonas palustris RepID=Q13DQ2_RHOPS E=2e-11 s/c=0.83 id=25% cov=94% -----IQSAEPVIFGVLKIVWSDGFEGVVDLRPLIAKGEMFEFLRaAPARFATVQREPYGHKIFWLDDqgdeiDFGSSSLRQRAERQAG- >UniRef50_D2Q720(18-88:139) Putative uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=D2Q720_9BIFI E=8e-08 s/c=0.82 id=23% cov=85% ----KVVNARATNDWMMLVTFSNGETRVFDGTNLFGK-PVYEPLRDQTVFDDFAIDH--AILTWdSSIDIDTNNLYNL------- >UniRef50_C4F7Q7(4-82:148) Putative uncharacterized protein n=4 Tax=Bacteria RepID=C4F7Q7_9ACTN E=8e-15 s/c=1.03 id=23% cov=94% --FHKVKEVVPLQDMRLCVRFANGSTKEYDVEKLAARFPQFAALEDEHLFEEVQVDVGGYGIVWNDDlDLSCDELWKNGVD---- >UniRef50_A8S039(6-78:79) Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S039_9CLOT E=6e-08 s/c=0.80 id=26% cov=88% -----LTSVTPLPNHVLQVDFVSGSRLLLDMKPYLDKIR-FRPLADARVWNSA--VTNGIFVRFGDVELSHDEILAMAEQE--- >UniRef50_B0JHM1(5-82:94) Molybdopterin-guanine dinucleotide biosynthesis protein A like n=2 Tax=Chroococcales RepID=B0JHM1_MICAN E=6e-15 s/c=1.05 id=18% cov=93% -----IVEVKPLNNYQLYLKFEDNQEGIINLEEIIEFVGIFQPLKDLDFLKTVKINPDWGTIYWENGaDLDPDVLYSLITNQS-- >UniRef50_C6VTV6(3-96:98) Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTV6_DYAFD E=3e-05 s/c=0.53 id=26% cov=74% ---PRVKEILSAEPFVITSLWTDGKVRVTDFGKFLAEYrgsgkSPFAKILQPDIFIQAKTDE--RTILWGD------------------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * Y 1 * * * * * * 1609 * * * * * * * * * * * * 573 1 0 * * * * * * 2043 0 0 F 2 * * * * 1535 * * * * 1951 3399 * * * * * * * * 1730 2 0 * * * * * * 3396 0 0 F 3 * * * * 866 * * * * 3852 * * * * * * * 4379 * 1582 3 71 4380 * 1585 585 * * 4606 1000 0 P 4 * * * * * * 4047 * * 3853 * * 306 * * * * * * 4023 4 0 * * * * * * 5231 0 0 K 5 * * 4660 3164 * * 5022 * 1521 5766 * * * 5540 1516 4548 5301 * * 6375 5 0 * * * * * * 6103 0 0 L 6 5391 * * * * * * 1328 * 2465 5743 * 5428 * * * * 1495 * * 6 0 * * * * * * 6261 0 0 T 7 4348 6161 6170 5825 6414 * 6259 2465 2343 4608 * 4811 * 5145 4103 6754 2017 3589 * * 7 0 * * * * * * 6268 0 0 A 8 3482 6620 3047 3066 * 4084 4227 * 3181 * * 3646 * 3047 * 2250 5257 * * * 8 0 * * * * * * 6268 0 0 V 9 2657 6204 * * 4914 * * 3833 * 6000 * * * * * * * 496 * * 9 0 * * * * * * 6284 0 0 E 10 * * 5026 2082 5150 * 5994 3867 2070 3894 * * * 4643 4561 4519 3086 3986 * 6918 10 0 * * * * * * 6285 0 0 A 11 2226 * * 6337 * * * 4471 6415 * * * 1193 5382 * 5106 4948 3594 * 3167 11 21 6113 * 0 * * * 6285 1000 0 L 12 5007 * * 4081 5882 4463 6203 4053 5392 1419 3927 5373 * 3900 5527 6785 4386 2832 * * 12 0 * * * * * * 6297 0 0 A 13 4410 * 2467 3018 * 2912 5190 6049 3710 * * 3628 3256 4806 4639 3200 5232 * * * 13 17 6427 * 0 * * * 6297 1000 0 P 14 5060 * 1364 4451 6126 2527 6103 * 6997 6204 * 2481 3395 * * 5515 * * * 5980 14 0 * * * * * * 6329 0 0 Y 15 * 6169 * * 3235 5155 3773 * * 4965 6468 * 5983 5139 4850 5619 5923 * 4990 766 15 0 * * * * * * 6436 0 0 R 16 4914 5659 * 5023 * * 4348 3736 3110 6169 6519 5417 * 3286 2230 4717 2422 3511 * * 16 0 * * * * * * 6436 0 0 L 17 * * * * 4716 * * 2561 * 647 4572 * * * * * 6097 3691 * 5673 17 0 * * * * * * 6449 0 0 R 18 5026 6492 5000 3775 3944 5695 4957 4691 4085 2352 6241 * * 3727 3466 5516 3685 4137 4726 3827 18 0 * * * * * * 6449 0 0 T 19 3967 5750 * * * * * 2357 * 1710 6351 * * * * 6271 6521 1394 * * 19 0 * * * * * * 6352 0 0 T 20 5296 * 4633 2505 5943 6129 6728 4339 4406 4637 6465 6392 * 5706 3270 4388 1741 4029 7147 5637 20 0 * * * * * * 6352 0 0 W 21 6592 6768 * * 367 * * 6925 * 5689 5506 * * * * * * * 3123 4629 21 0 * * * * * * 6352 0 0 S 22 3849 * 2718 2347 * 6185 6972 5155 7326 6661 * 3017 * 5921 4805 1947 4300 5051 * * 22 0 * * * * * * 6352 0 0 T 23 * * 1098 6185 * 4509 5447 * * * * 1796 * * * 4206 3182 * * * 23 0 * * * * * * 6352 0 0 G 24 * * 5077 4492 * 249 5063 * 7103 * * 5484 * 6515 * 6151 * * * * 24 0 * * * * * * 6352 0 0 E 25 4555 * 7027 1823 4553 6398 * 4471 3427 4466 6118 6034 6185 4060 4298 3310 3190 4424 * 5775 25 0 * * * * * * 6352 0 0 V 26 4625 6392 * 2834 5725 * 4939 3789 3671 6239 6682 * * 4159 3088 3552 2794 2669 * 5524 26 0 * * * * * * 6352 0 0 L 27 3998 6058 * * 4546 1654 6880 4381 2657 3882 5411 * * 6147 2340 * 5449 5573 * * 27 20 6185 * 2000 415 * * 6352 1000 0 E 28 * * 4451 2776 * * * 2104 4373 3173 * * * 5281 3271 * 3814 2281 * 6593 28 0 * * * * * * 6352 0 0 V 29 4231 * * 6408 2416 * * 3973 * 3182 * * * * * * 4426 1608 * 2327 29 0 * * * * * * 6352 0 0 D 30 6661 5536 416 * * * 6034 * * * * 2818 * * * 4897 6143 * 6129 * 30 0 * * * * * * 6352 0 0 V 31 4375 4828 * * 3283 5801 * 3670 * 1276 2789 * * * * * 6837 2727 * * 31 0 * * * * * * 6352 0 0 G 32 2909 * 6200 3617 * 4356 * 6514 2521 5231 * 6607 * 6391 3270 1965 3437 6809 6185 6146 32 24 * 5918 * * * * 6351 0 0 D 33 4235 * 3210 3279 * 4333 4565 * 3896 * * 4070 1749 4884 4372 3163 5270 * * * 33 16 * 6523 * * 943 1059 6345 0 1579 I 34 5756 * 4795 4862 3890 * 6160 3818 5135 1607 4264 * * 6061 5716 5982 5417 4877 6635 2104 34 11 * 7098 * * 0 * 6348 0 1622 L 35 4865 * * * 3362 * * 1999 * 1190 5233 * 6812 * * * 5392 3238 6103 * 35 290 4931 2745 1248 788 0 * 6350 1890 1000 R 36 2635 * 3837 2270 5330 4343 3451 * 4037 5425 6501 4676 4413 5253 4673 3292 * 5331 * 5477 36 202 * 2935 * * 83 4165 6349 0 4229 K 37 5203 * 3623 4518 4871 5214 5287 4819 1890 6937 * 3445 * 5805 2982 4940 2572 * 6511 * 37 203 4419 3563 874 1138 0 * 6318 2116 3944 I 38 4631 * 6085 * 4010 1675 3956 3949 4707 5549 3369 4259 7048 * 6677 4338 6558 5798 5021 3242 38 188 4230 3859 1484 638 0 * 6301 2621 3216 P 39 5158 * 4493 2898 * 2311 * * 3984 * * * 1487 5362 4279 3895 6783 5661 * * 39 132 * 3511 * * 0 * 6339 0 3231 D 40 3539 * 3918 5350 6805 5101 5955 2963 * 3982 3511 4746 4174 4277 * 5438 5672 1864 5148 * 40 22 * 6075 * * 0 * 6242 0 3022 L 41 4806 * * * 533 * * 5702 * 3840 6716 * * * * 6175 6125 * * 2774 41 0 * * * * 0 * 6317 0 1000 A 42 2024 * 6725 2306 * 3615 * * 2863 6200 * * * 4128 4002 3256 4357 5338 6389 * 42 14 6723 * 0 * * * 6350 1000 0 P 43 3567 6659 4418 3178 6243 5223 * 5652 3093 4951 6277 * 1605 4106 3542 5335 6387 5903 * * 43 20 6173 * 0 * * * 6350 1000 0 I 44 * * * * 4726 * * 4011 * 272 * * * * * * * 5755 5111 5363 44 28 * 5719 * * * * 6350 0 0 L 45 3155 * 6611 4663 6691 * 6026 6110 2038 3419 6600 4071 * 3945 2054 4640 6387 4878 * * 45 71 4382 * 1247 790 * 0 6317 2351 1000 D 46 4359 * 700 4283 * * * * 4817 * * 2781 * 4131 * 5638 5247 * * * 46 18 6372 * 0 * * 0 6317 1000 1000 P 47 4510 * 4594 3220 6165 * 5326 4684 4156 3029 5714 * 1424 5397 4485 5169 * 6192 7028 4581 47 15 * 6642 * * * 0 6317 0 1000 E 48 2161 * 3553 2468 * 4070 5713 * 4435 5828 * 4577 5713 4096 4218 3132 4073 5541 * * 48 34 5423 * 0 * * 0 6312 1559 1698 A 49 4068 * * 4228 2424 * * 3907 4437 2159 4918 5334 * * 4079 * 5925 3379 * 2896 49 0 * * * * * 0 6312 0 1698 F 50 6139 * * * 182 * * * * 4729 6044 * * * * 5639 * 6912 5419 * 50 14 * 6706 * * 1000 1000 6312 0 1698 A 51 2113 6562 5657 3677 6697 5583 5813 6235 2480 4996 6542 3312 * 4577 3329 3445 * 4527 * * 51 16 * 6542 * * * 0 6344 0 1550 R 52 4288 6298 4482 6548 * * 6098 * 2983 4057 6700 3943 * 1874 3697 3261 2730 * * * 52 27 * 5758 * * 1562 597 6345 0 1973 V 53 1462 * * * 2793 * * 5997 * 6152 * * * * * * 6129 1156 * * 53 29 * 5658 * * 0 * 6323 0 2299 H 54 4020 * * 5273 4121 5292 3417 * 2387 * * 5468 * 2659 2463 3662 3961 6359 * 5208 54 57 * 4681 * * * 0 6304 0 1000 I 55 4828 * * * * * * 2408 * 2538 6269 6543 * 6328 6167 6019 4486 1046 * 6661 55 0 * * * * 2146 369 6284 0 2612 A 56 4326 * 1390 2783 * 3603 5460 6201 5117 5590 6664 4142 * 6559 * 3580 4637 4203 * * 56 87 * 4097 * * 456 1885 6297 0 2303 E 57 3506 6051 2648 2592 3862 * 3670 * 5000 6600 * 5355 2944 4938 6102 4108 4839 4345 * 4681 57 411 * 2013 * * * 0 6266 0 3319 W 58 5673 4786 3079 3236 5478 2149 5560 * * 5059 5130 4421 * * 6117 3902 6144 4915 2573 4359 58 135 * 3485 * * 1821 480 6065 0 5035 E 59 6493 * * 5979 4951 817 * * * 3805 4490 4778 * 5481 4376 5587 6030 4089 4601 6163 59 159 6381 3438 3459 138 176 3119 6185 1000 4716 G 60 4589 6596 4141 5806 5169 1244 4260 5047 5868 * 6140 * 4950 5849 4382 4426 6144 * 5907 2892 60 15 * 6582 * * 423 1977 6264 0 3695 S 61 2918 4469 * 6474 4992 2412 * 4952 6188 * * 5206 * * * 3729 1409 4562 * 5346 61 14 * 6694 * * 0 * 6238 0 2280 V 62 * * * * 5772 * * 1445 * 2405 * * * * * * * 1233 * * 62 0 * * * * * 0 6298 0 1000 E 63 3213 4362 6588 2310 5208 4302 * 4432 * 5422 * 5296 * 6809 4496 3409 2999 2590 * 5635 63 0 * * * * 0 * 6298 0 1000 W 64 * * * * 4709 * * * * * * * * * * * * * 56 * 64 107 3800 * 870 1142 * * 6298 3059 0 F 65 3809 5495 4042 4076 4889 3343 * 6723 5585 5302 6650 2727 1813 * * 2977 * 6015 * 6577 65 217 2843 * 324 2314 * * 6277 3669 0 D 66 * * 1062 3349 * 4100 * * * 5828 * 1712 * 6015 * 5250 * * * * 66 64 5273 5838 0 * * * 6277 1607 0 T 67 4858 * 2374 3316 4392 1719 6060 3396 * 3353 5673 * * 4887 * * 5896 5382 5736 * 67 798 1235 * 436 1938 * 0 6165 4596 1441 E 68 5288 * 610 1953 * * * * 5262 * * 4845 * * * * * * * * 68 108 3795 * 917 1089 * 0 5705 2445 1441 F 69 * * * * 2952 * * 1510 * 1367 5815 * * * * * * 3457 5430 * 69 0 * * * * 0 * 5686 0 1441 G 70 1668 3015 3180 5266 * 2441 * * 4997 * * * * * * 2367 5960 * * * 70 26 5780 * 1000 1000 * * 5615 1000 0 R 71 1852 5647 * * * 5199 5022 * * * * * 1091 * 4813 3245 5540 * * 6231 71 0 * * * * * * 5609 0 0 D 72 * * 613 2092 * * * * 5545 * * 5540 * 5457 * 5714 5216 * * * 72 0 * * * * * * 5609 0 0 N 73 3023 * * 3666 * * 5790 * * 5449 * 3085 * 5193 5980 3627 1440 3822 * 3718 73 0 * * * * * * 5619 0 0 V 74 5972 * * * * * * 3515 * 401 4913 * * * * * * 3238 * * 74 0 * * * * * * 5619 0 0 Y 75 5193 * * 5610 5817 * * * * 5008 * * * * 2575 * * * 4236 551 75 30 * 5620 * * * * 5623 0 0 A 76 2228 * 4260 2373 5600 * 5358 * 4167 4230 4582 3349 * 5409 3505 3572 * * * 4272 76 64 4517 * 1000 1000 0 * 5600 1296 1000 W 77 5289 * 4349 4499 * * 4969 5339 5518 1613 3527 4496 * * 2339 * 5780 5370 3714 5137 77 33 5461 * 1585 585 * * 5567 1000 0 A 78 1159 * * * * 2417 * 5276 * * 5450 * 5627 4681 5079 2323 * 5173 * * 78 0 * * * * * * 5525 0 0 K 79 * * * 2803 * * 4795 5297 2043 * * * * 4023 3776 * 3045 1883 * 5275 79 0 * * * * * * 5414 0 0 E 80 4720 * 4541 1290 * 4484 4754 * 3872 * * 4566 * 2536 3267 * 4590 * * * 80 0 * * * * * * 5235 0 0 Q 81 4520 * * 3028 * * * * * 4536 * * * 519 * 4552 * 4314 * * 81 0 * * * * * * 4878 0 0 A 82 593 * * * * * * * * * * * 4048 * * 1855 * * * * 82 0 * * * * * * 4249 0 0 G 83 * * 3355 * * 331 * * * * * 3218 * * * * * * * * 83 0 * * * * * * 3636 0 0 E 84 * * * 0 * * * * * * * * * * * * * * * * 84 0 * * 0 * * * 2515 0 0 //