HHsearch 1.5 NAME d2ahra1 FAM FILE d2ahra1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d2ahra1.a3m DATE Tue Mar 9 03:56:22 2010 LENG 104 match states, 104 columns in multiple alignment FILT 106 out of 484 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.1 EVD 0.4033 -1.0806 SEQ >ss_dssp CCHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHCCTTSHHHHHHHHHHHHTHHHHHHHHHHHHHHH HHHC >sa_dssp EEEDDEDAEDECCDEDDEEDBCDDADDCDEEEDEDEDBCDDCDEDDEEDDDEDEECEDDEEDCCEEECEEECEDDEDCDDDEEECDEEEEDDDCEECBDE CEEE >ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH HHCC >ss_conf 9146999976203899999999999999986999899999999999999999997799989999974689610699999999649499999999999999 8319 >Consensus exxdxxtalsGsgPAxxxxxxeaxxxaxvxxGlxxxxAxxlvxqtxxGxaxllxxxxxxpxxlxxxVxsPgGtTxxglxxLexxgxxxxixxaixaaxxr xxel >d2ahra1 KDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLXELERLGLTATVSSAIDKTIDK AKSL >UniRef50_A0NR90(160-263:267) Putative pyrroline-5-carboxylate reductase protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NR90_9RHOB E=2e-06 s/c=0.52 id=23% cov=101% RQIEVFTAITGPVPGFAAFFADCIVDYACKNGVERPIAERAAKQLILSAGQIMAGDARSPAEHVQEMVDYAGTTAAGLIKLKELGVSDLISQGLEAATER VRTI >UniRef50_B8MC38(196-296:318) Pyrroline-5-carboxylate reductase, putative n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MC38_TALSN E=2e-17 s/c=0.89 id=17% cov=98% --MNAASVTGASTIAFFATTLSGVVKGAIETGLPEEDAIQLAAQAMKGTAELVL-RGEQPLKVRDRVMTPNGCTEKGVNALQNGRVEEVFVEAMKQAVER VFEL >UniRef50_D0W601(155-258:263) Pyrroline-5-carboxylate reductase n=1 Tax=Neisseria cinerea ATCC 14685 RepID=D0W601_NEICI E=3e-25 s/c=1.12 id=18% cov=101% EKMHGITGISGSGPAYVFYLLDALQNAAIGQGFNAEEARALSLATFKGAVSLAEQTGEEFGQLRQKVTSKGGTTHEAIETFKRHHVAEAIEEGVCACVRR SQEM >UniRef50_A4WMP6(146-245:247) Pyrroline-5-carboxylate reductase n=5 Tax=Thermoproteaceae RepID=A4WMP6_PYRAR E=1e-14 s/c=0.81 id=27% cov=97% KLIDPLTVLLGSGPAIVAELATALIRAGVNIGVPWDLSREIVLSLM--ASLPSLDDRFTLEKLPQYVATPGGTTIKALVAMASA--EEVIAKALEEALNR ISKL >UniRef50_A8FFE6(164-262:282) Pyrroline-5-carboxylate reductase n=3 Tax=Bacillus RepID=A8FFE6_BACP2 E=1e-12 s/c=0.75 id=19% cov=95% ----AASDIVSCGPAFISFLVQKMIEAAVEEtDISKEEATTLSEDMLVGLGRLIEKRLYTLPTLQDKVCVKGGVTGEGIKALE-AGVQDMFHRLFQNTHE KFDE- >UniRef50_UPI0001C420C5(191-296:304) pyrroline-5-carboxylate reductase ProC n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C420C5 E=8e-13 s/c=0.71 id=24% cov=98% --LEICTILTSCSPAFIALMIDNFAERISNISdLSKDEAEDMILKTVIGTAILKEDKKISNSEIIEKVATEGGITAEGIDLLDKR-LNSIYKKLINTLLN RyeevSKEM >UniRef50_Q83FH8(188-269:296) Pyrroline-5-carboxylate reductase n=2 Tax=Tropheryma whipplei RepID=Q83FH8_TROWT E=2e-07 s/c=0.69 id=23% cov=80% EHLTIVSAITGFYPVYMLYMLTKIKEATEKLGLPRDISQAAVETAWIGYAQVV---------LKHK------TTAKGLLRLIPRGPRSAVVKCLDRT--- ---- >UniRef50_Q2PIP2(189-289:292) Pyrroline-5-carboxylate reductase n=2 Tax=Aspergillus RepID=Q2PIP2_ASPOR E=1e-12 s/c=0.73 id=26% cov=98% --FDICAVSVGCAGSLLLLAIDGLLDAAVAEGVKRPDVQNLVVNSAIGMMKLVPA-GDHVSVLREKIASPGGCSIRALLELEKLGVRAAFTTAIMAAAEK SKHM # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * 976 * * * * 1580 * * * * 3588 3753 * * * * * 1 0 * * * * * * 5319 0 0 D 2 * * 2225 2770 6486 * 3081 * 4753 5129 * 4638 * 1581 6484 5268 5725 * * 6149 2 0 * * * * * * 5745 0 0 F 3 * * * * 2063 * * 1874 * 2058 2513 * * 6445 * * * 4342 * 6421 3 0 * * * * * * 6141 0 0 D 4 6876 * 921 3950 6648 4847 3316 * * * * 3285 4239 * 6538 4064 6043 6361 * * 4 0 * * * * * * 6141 0 0 T 5 1398 7095 5906 * 6282 4281 6763 3087 5605 4559 6430 6400 5458 5968 5277 4718 3250 3627 * 5039 5 0 * * * * * * 6160 0 0 F 6 1888 4243 * * 2993 5129 * 3071 * 3000 4253 * * * * 5179 * 2456 6883 6943 6 0 * * * * * * 6193 0 0 T 7 4365 * * * * 5777 * 3537 * 4613 4668 6943 * * * 3047 718 5062 * * 7 0 * * * * * * 6193 0 0 A 8 945 6922 4621 6315 * 2475 * 5223 * * 5762 * 5475 6784 * 4198 * 3209 * * 8 16 6492 * 0 * * * 6193 1000 0 L 9 4003 * * * 5271 * * 1728 * 1404 4509 * 6396 * * 4732 4836 3488 * 6114 9 0 * * * * * * 6166 0 0 A 10 2463 5352 6180 * 7089 4663 * 4296 * 6622 5979 4473 6137 * * 1659 2352 3822 * 6135 10 38 * 5271 * * * * 6166 0 0 G 11 3756 6008 * * * 408 * * * * * * * * * 2845 * 5816 * * 11 0 * * * * 1014 986 6135 0 1628 S 12 4034 1974 * * 4231 4800 * * * 5761 * * 6226 * * 903 5671 6782 * * 12 0 * * * * 0 * 6146 0 1000 S 13 2812 5332 * * * 811 * * * 6744 * * 6135 * * 2572 5062 6247 * 5150 13 0 * * * * * * 6166 0 0 P 14 4407 * * * * 5658 * 4379 * 5113 5348 5332 432 6180 * * 5117 6823 * 6152 14 0 * * * * * * 6166 0 0 A 15 342 * * 6047 * 3009 * * * * * 5124 * * * 5105 * 6148 * * 15 0 * * * * * * 6166 0 0 Y 16 * * * * 1367 * 6800 4845 * 3173 6776 * * * * * 6204 6437 5509 1317 16 0 * * * * * * 6166 0 0 I 17 5023 5629 * * 2886 * 6437 2397 * 2707 4708 * 4356 * * * 4610 1847 6615 4540 17 0 * * * * * * 6166 0 0 Y 18 1890 4609 * * 2186 * * 5358 * 4069 6794 * 6421 * * 3534 3391 * * 2449 18 0 * * * * * * 6166 0 0 L 19 4137 6490 * 3525 4869 * 4272 5417 6421 1807 4126 4935 * 5936 4038 4614 4902 3480 * 3221 19 0 * * * * * * 6166 0 0 F 20 3331 * * * 2166 * * 2627 * 2318 2977 * 6204 * * * 6819 3317 * 3930 20 0 * * * * * * 6166 0 0 I 21 1881 6615 * * 4266 * * 2071 * 2339 3628 * * * * * 5868 3047 * 6421 21 0 * * * * * * 6166 0 0 E 22 6617 * 2415 1405 * 5215 5028 5372 4177 5754 6278 5040 * 3451 4333 4430 5365 6137 * * 22 0 * * * * * * 6166 0 0 A 23 953 6247 * 4869 6287 2945 5213 * 5255 6738 * 6120 * 4603 * 2939 4961 * * 6278 23 0 * * * * * * 6166 0 0 L 24 5434 * * * 2928 * * 3601 * 1628 1712 * * 6794 * * * 4149 5437 4446 24 0 * * * * * * 6166 0 0 A 25 2569 * * 4526 * 5800 * 2596 4597 4234 3958 * * 3456 6849 4622 3616 2327 6789 6000 25 0 * * * * * * 6166 0 0 K 26 4370 * 1865 2310 * 5291 * * 3044 4693 * 3416 6406 3842 3822 6536 * 7000 * 5296 26 0 * * * * * * 6166 0 0 A 27 1008 * 6828 5189 6137 2749 6617 * 4615 * 6907 6545 * * 5059 3625 5307 5079 5522 4443 27 13 6791 * 1000 1000 * * 6166 1000 0 G 28 1329 5493 * * * 1359 * 5197 * 4926 6137 * * * 6180 4826 4350 5854 * * 28 0 * * * * * * 6166 0 0 V 29 3958 5336 7181 3456 * * * 2605 5310 3020 5335 * * 4477 * 5392 5616 1373 * * 29 26 5793 * 0 * * * 6166 1619 0 K 30 1833 * 5082 3195 * 6040 6983 * 2426 4433 5567 4896 * 5999 3166 4351 4174 5702 * 5662 30 0 * * * * * * 6166 0 0 N 31 4221 5800 * 2663 * 6807 4624 3568 5192 2944 3757 4520 6791 3696 3670 4751 4266 4198 6474 4566 31 18 6371 * 0 * * * 6166 1000 0 G 32 6791 * 6371 * * 133 * * * * * 5030 * * * 4791 * * * * 32 70 4406 * 317 2343 * * 6166 2313 0 I 33 * * * * 2608 * * 2203 * 1255 4266 * * * * * * 3007 * 5414 33 0 * * * * * * 6166 0 0 P 34 6152 * 2682 3707 * * 6431 * 3416 * * 4093 2059 * 4446 2128 3962 * * 6536 34 0 * * * * * * 6166 0 0 K 35 3408 * 4503 2901 6287 5677 * * 2798 4813 6059 6815 4251 6710 1782 4007 6727 5460 5697 5278 35 0 * * * * * * 6166 0 0 A 36 4701 * 2136 1658 * 5517 5568 * 3317 * 6536 6833 3674 3422 * 3992 6615 6687 * * 36 0 * * * * * * 6166 0 0 K 37 4704 * 2565 2661 * * 6669 3064 5766 2842 6918 6059 * 3073 6464 * 3020 4023 * 6789 37 0 * * * * * * 6166 0 0 A 38 576 6474 * * * 5605 * * * 6647 * * * * * 2542 * 3113 * * 38 0 * * * * * * 6166 0 0 L 39 4056 * 5853 3684 5267 * 5788 3482 3271 4100 4650 4754 * 4001 2194 5769 4268 6240 4247 4175 39 0 * * * * * * 6166 0 0 E 40 3457 * 3610 2333 5344 * 5518 * 2764 5118 5542 5658 * 3565 2710 4633 4887 4893 * 5666 40 0 * * * * * * 6166 0 0 I 41 3287 7299 * * 6103 6617 * 2553 * 1049 2943 * * * * 6862 * 3896 * 7182 41 16 * 6496 * * * * 6166 0 0 V 42 1450 * * * 6900 6919 * 2758 * 5416 * * * * * 3750 5581 1511 * * 42 0 * * * * 0 * 6157 0 1000 T 43 2813 6815 * 3868 * 5448 7155 3430 4366 2164 5585 5601 * 5731 4168 3528 3485 3409 * * 43 0 * * * * * * 6166 0 0 Q 44 3764 * 3977 2562 6585 * 6237 * 3032 6647 6028 4617 * 1446 5795 5278 5000 * 7059 4963 44 0 * * * * * * 6166 0 0 T 45 3038 4684 * * * 5343 * * * 3497 3886 5080 * * * 2973 1247 3641 * * 45 12 * 6867 * * * * 6166 0 0 V 46 3002 5812 * * 3032 * * 2481 * 1708 3073 * * * * * * 3098 6145 * 46 15 * 6612 * * 0 * 6168 0 1000 L 47 3657 5963 6816 3090 4294 7061 * 2370 2717 3197 6844 7169 * 5055 3516 5551 6476 4209 * 4454 47 0 * * * * * 0 6158 0 1000 A 48 3693 * 5963 6172 * 253 * * 6488 * * * * * * 4548 * * * * 48 0 * * * * 0 * 6158 0 1000 S 49 1710 5355 * * 5701 4115 * * * 4302 5093 * * * * 2460 1698 6807 * 6148 49 0 * * * * * * 6166 0 0 A 50 1064 5358 * * 6496 3021 * 3991 * 5147 5408 * 6000 * * 3482 4374 3398 * * 50 0 * * * * * * 6166 0 0 S 51 2981 * 5834 2306 * 5619 7181 5451 2185 4664 5778 6806 * 4319 3331 3753 4333 4819 * 6922 51 31 * 5568 * * * * 6166 0 0 N 52 * * * * 5098 * 6729 4835 6849 886 2136 5118 6601 6461 6870 5654 6909 5073 6458 5578 52 0 * * * * 0 * 6156 0 1606 L 53 2857 * * * 5849 * * 3510 6120 1201 3102 * * * * 5110 * 2745 * 6287 53 73 * 4332 * * * * 6166 0 0 K 54 3729 * 6471 2065 6768 * * 6323 2783 2138 4775 6740 5611 4845 3936 5036 4613 5075 * 6286 54 35 * 5366 * * 1255 784 6181 0 2784 T 55 3432 * 4214 1912 * 4154 4996 * 3421 5721 6678 4313 * 2614 4560 3421 5123 * * * 55 135 6693 3651 0 * 278 2512 6165 1000 2943 S 56 3940 * 3742 4589 * 5457 * * 3584 6836 6554 3971 7088 5407 3173 1799 2676 * * 4518 56 26 6533 7109 2585 263 1070 933 6061 1000 3333 S 57 5070 6665 2664 4189 6462 1448 6454 6115 3579 6274 7011 3467 4607 6733 4885 4483 5635 * * * 57 17 * 6425 * * 317 2344 6182 0 2637 Q 58 3943 * 3511 2649 5442 * * 3889 2608 3600 7159 4228 * 4624 3510 6137 4496 4601 6605 4260 58 86 5236 4987 3520 132 * 0 6188 2217 1557 S 59 5076 5087 3649 3374 * 5442 2113 * 4785 5480 6699 5283 4012 6772 5724 2276 3058 * * * 59 28 5719 * 2585 263 1238 796 6158 1104 2852 P 60 4228 * 6823 * 3031 6514 * 4690 * 3894 5803 6087 800 * * * 4646 4279 * * 60 13 6750 * 0 * 514 1739 6168 1000 2078 H 61 2110 * 3564 2419 * 4628 4850 6718 5653 5149 * 4579 5220 3934 5045 2856 * 5883 5818 5212 61 16 * 6505 * * * 0 6194 0 1000 D 62 3730 * 2761 1859 * 6587 5968 6060 3791 4982 6760 5833 * 3155 * 6021 3398 3396 * 6398 62 0 * * * * 1178 842 6187 0 1521 F 63 5485 * * 5472 4510 * 6228 2827 * 851 4397 * * 6815 * * 6844 3146 6822 5978 63 0 * * * * * 0 6157 0 1000 I 64 4778 6022 * 6054 * * * 2575 2844 3979 5632 6833 6613 4069 1765 * 5341 2983 * 5757 64 0 * * * * 0 * 6157 0 1000 D 65 4127 * 1981 2111 * 4918 4530 * 2983 6849 * 3863 * 3737 4799 3907 * * * * 65 0 * * * * * * 6166 0 0 A 66 3412 * 4673 3520 6152 5002 6789 5124 2449 6717 4404 3995 * 2781 2964 3705 5276 6996 * 6622 66 60 5229 6148 0 * * * 6166 1693 0 I 67 * * 6195 * 5046 * * 2404 * 4183 5121 5124 * * * * 6718 664 * 6142 67 0 * * * * * 0 6194 0 1000 C 68 2246 2658 6195 5217 * * * * 5669 6788 3338 4497 * 6972 6142 2780 2207 4875 * * 68 15 * 6633 * * * 0 6194 0 1000 S 69 3943 * 4777 * * 5999 * * * * * 6169 * * * 1096 1586 3874 * * 69 0 * * * * * 0 6186 0 1609 P 70 5076 * * 6121 * 6458 * * 2640 * * * 530 * 6540 5763 * * * 4000 70 0 * * * * * 0 6186 0 1609 G 71 3054 * * 6067 * 735 * * 4242 * * 3479 * 5381 3749 5439 * * * * 71 0 * * * * * 0 6186 0 1609 G 72 * * * * * 25 * * * * * * * * * 5881 * * * * 72 0 * * * * 1117 892 6186 0 1609 T 73 4253 4204 * * * * * 2910 * 5714 6803 * 5181 * * 3114 1104 3013 * * 73 0 * * * * * 0 6159 0 1000 T 74 5880 * * * * 3769 * * * * * * * * * 4862 192 * * * 74 0 * * * * 0 * 6159 0 1000 I 75 1924 * 6406 2392 * 6371 5972 1541 * 5267 7155 * * 4282 5283 6739 * 5635 * 5458 75 0 * * * * * * 6166 0 0 A 76 1411 * 5252 2127 * * * * 3583 * 5926 * * 3417 3131 6789 5124 6464 * 6396 76 0 * * * * * * 6166 0 0 G 77 1891 * * 6135 * 623 * * * 6738 5597 * * * 6490 6396 6204 * * * 77 0 * * * * * * 6166 0 0 L 78 6135 * * * 5826 * * 2007 * 1181 5137 * * 5399 * * 5973 2316 * 6744 78 15 * 6585 * * * * 6166 0 0 X 79 4285 5784 3360 2921 5547 5742 5089 5600 3683 2920 5822 2832 * 4378 4025 5886 5652 4202 * 4564 79 0 * * * * 0 * 6214 0 1000 E 80 2392 * * 3087 4442 4438 4460 4414 4373 4808 * 6849 * 5157 4668 3308 3759 2535 * * 80 0 * * * * * * 6166 0 0 L 81 4685 6717 * * 3454 * * 4873 * 560 3056 * * * * * * 6287 6047 * 81 0 * * * * * * 6166 0 0 E 82 5188 * 3020 1295 * 6851 6746 5414 4170 * 5077 4127 * 4455 3144 4990 6624 4924 * 5335 82 49 6846 5358 0 * * * 6209 1000 0 R 83 3667 * 3558 2087 * 6849 6390 * 2358 5998 6349 4765 6106 3405 2935 3776 6976 * * * 83 0 * * * * 0 * 6183 0 1724 L 84 2433 * 3640 3674 5775 3049 4291 * 3616 4222 * 3626 * 5645 3077 4576 4749 * * 4950 84 102 * 3878 * * * * 6125 0 0 G 85 4478 * 4189 4346 * 816 5358 * 4825 6646 * 3060 6169 5202 5885 6647 5294 * * * 85 86 4110 * 690 1395 286 2473 6044 2854 3160 L 86 6571 * * * 2186 * * 3119 * 1542 * * 6080 * * * 6028 1984 6584 5807 86 0 * * * * 0 * 6107 0 1000 T 87 4417 * 3791 3714 4888 4203 6031 5951 3579 6720 5532 5322 4007 4100 2035 3373 4081 6824 * 5919 87 0 * * * * * * 6113 0 0 A 88 2715 * 2837 2873 6329 2618 6810 * 4212 * * 5645 4972 5980 3906 2704 4820 * * 6671 88 0 * * * * * * 6113 0 0 T 89 1666 * 6034 * 6535 4007 7139 2507 5423 3558 4273 5888 * * 6812 3901 4005 3342 * * 89 0 * * * * * * 6113 0 0 V 90 * * * * 2221 * * 1555 * 2940 3799 * * * * * 5743 2361 * 5073 90 0 * * * * * * 6113 0 0 S 91 2856 * 3818 3856 7416 4737 6239 2597 4297 5095 3251 4635 * 4050 5060 4194 4661 3809 6768 6696 91 0 * * * * * * 6113 0 0 S 92 3865 6431 2851 2023 * 6008 * 4750 2482 6519 * 4381 * 4118 3409 3793 5593 * * * 92 0 * * * * * * 6103 0 0 A 93 765 3569 * * * 3095 * 6345 * 4424 * * * * * 4220 3783 5309 * * 93 19 * 6286 * * * * 6103 0 0 I 94 4039 5135 * * 4091 * * 2108 * 1937 3327 * * * * * 7018 2127 * 5463 94 0 * * * * 0 * 6084 0 1000 D 95 4705 7146 3358 2505 * 5509 5187 4422 3239 3700 5585 4627 * 3365 4375 5075 3827 3707 * 5745 95 18 * 6364 * * * * 6097 0 0 K 96 1139 * 5452 4293 * 5564 * 6776 2780 * * 6204 * 4427 3439 4400 3642 6955 * 6886 96 0 * * * * * 0 6089 0 1000 T 97 804 3798 * * * 4804 * * * 6068 5170 6723 * * * 3243 2927 5052 * * 97 0 * * * * * 0 6089 0 1000 I 98 2933 5731 * 5431 4962 6546 5422 4855 4872 3534 4522 4807 * * 5692 4672 2478 2659 * 2940 98 0 * * * * 0 * 6035 0 1000 D 99 5028 * 2955 1809 * 5745 5644 * 2248 5671 6023 3234 * 4819 4159 5680 4549 6521 * * 99 0 * * * * * * 6045 0 0 K 100 5602 * * 5221 * * 4524 * 1594 * * * * * 841 * * 5667 * * 100 25 5855 * 2000 415 * * 6045 1000 0 A 101 1970 5433 5309 6733 4672 3777 * 5187 * 5737 6314 3873 * 6368 * 1608 3648 5164 * * 101 0 * * * * * * 5976 0 0 K 102 4695 * 5248 3030 6310 * 5097 3623 2086 4582 5523 5567 * 4695 2469 5434 4794 3924 * 5305 102 0 * * * * * * 5915 0 0 S 103 3371 * 5251 957 * 5479 5305 * 4743 * * * * 3239 5786 3600 3829 * * * 103 0 * * * * * * 5850 0 0 L 104 * * * * * * * 2583 * 881 1786 * * * * * * * * * 104 0 * * 0 * * * 5737 0 0 //