HHsearch 1.5 NAME d1ztra1 FAM FILE d1ztra1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1ztra1.a3m DATE Tue Mar 9 02:42:11 2010 LENG 60 match states, 60 columns in multiple alignment FILT 109 out of 1751 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.5 EVD 0.4382 1.0387 SEQ >ss_dssp CCCCCSSSCSSHHHHHHHHHHHTTTSHHHHTHHHHHHHHTCCHHHHHHHHHHHTTSSCCC >sa_dssp EEEEDEEDDDCEEDDEDDEDCEDCECBDEEECEEDCEEDECEEDCBDECBDEEEDEEEEE >ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC >ss_conf 988758878999999999999887898889999999995299658537624356552049 >Consensus xxkrxRxxftxxQxxxLexxFxxnxyPsxxxrxxLAxxlxlsxxxVxxWFqNrRxkxKrx >d1ztra1 DEKRPRTAFSSEQLARAKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIRRS >UniRef50_UPI0000F2E482(208-254:524) PREDICTED: similar to hCG20958, n=1 Tax=Monodelphis domestica RepID=UPI0000F2E482 E=7e-10 s/c=1.39 id=26% cov=78% --KKTRTLYRTDQLKELEKMFQEDHYPDSDKRREIASAVGVTPQRIMV------------ >UniRef50_A8WTM1(356-413:434) Putative uncharacterized protein n=2 Tax=Caenorhabditis briggsae RepID=A8WTM1_CAEBR E=1e-07 s/c=0.99 id=23% cov=95% --RRGRIVYTAHELNVLEDYYEKdpNACADPKKRDMMCKTLSIDYHRLKVWFQNRRRKDK-- >UniRef50_B1A9Y3(362-402:552) PaxB n=1 Tax=Amphimedon queenslandica RepID=B1A9Y3_9METZ E=3e-05 s/c=1.21 id=29% cov=70% ---------TPFQIHQLELSYNTSHYPARPTVKQLASLLDLPESTIESWF---------- >UniRef50_Q29CY1(879-938:1018) GA15133 n=2 Tax=pseudoobscura subgroup RepID=Q29CY1_DROPS E=5e-05 s/c=0.81 id=26% cov=95% --KKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNarRRSmdKWR-- >UniRef50_Q16KU0(21-83:160) Homeobox protein extradenticle, putative n=11 Tax=Metazoa RepID=Q16KU0_AEDAE E=2e-06 s/c=0.85 id=28% cov=102% DARRKRRNFSKQASEILNEYFyshLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKKN >UniRef50_Q5QMM3(90-150:267) WUSCHEL-related homeobox 8 n=9 Tax=Magnoliophyta RepID=WOX8_ORYSJ E=3e-05 s/c=0.82 id=26% cov=95% ---RQRWTPTPMQLQILENIFDQgngtpSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKR- >UniRef50_B4QJT7(378-435:759) GD13969 n=13 Tax=Pancrustacea RepID=B4QJT7_DROSI E=3e-09 s/c=1.09 id=20% cov=98% -KRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKR- >UniRef50_B0D0X2(249-306:804) Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D0X2_LACBS E=1e-06 s/c=0.94 id=27% cov=98% --KKKRKRADAAQLKVLNETYNRTAFPSTEERHALAKALDMSARSVQIWFQNKRQSMRQT # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * D 1 * * 1768 1668 * * * * * * * 1352 * * * * * * * * 1 0 * * * * * * 4710 0 0 E 2 3436 * * 4011 * * 3536 * 2280 * * 3844 4265 1756 4815 4651 4572 * * 5762 2 0 * * * * * * 5321 0 0 K 3 * * * * * * * * 975 * * * 5816 5321 1235 5404 * * * * 3 78 4253 * 0 * * * 6073 1870 0 R 4 * * * * * * * * 1495 6294 * * 6308 5785 858 4325 * * * * 4 46 4992 * 536 1689 * * 6002 2004 0 P 5 4246 * 6474 6185 * 5140 4832 5088 2110 6275 4605 5260 2472 5068 3297 3708 3254 6579 * 6156 5 54 5714 5844 1337 727 * * 6291 1706 0 R 6 5188 * * * * * * * 3656 * * * * 5870 210 * * * * 6447 6 32 * 5522 * * 974 1026 6303 0 1504 T 7 4832 6182 * * 6941 * 4848 4163 3069 5239 4970 * 5375 5005 4285 3506 1346 4846 4710 6163 7 34 5411 * 1779 497 609 1538 6324 1620 2081 A 8 4235 * * * 4929 * * 3564 3947 4457 6364 5536 3717 4636 1846 3565 3718 2937 * * 8 21 7293 6936 0 * 0 * 6445 1000 1000 F 9 4406 * * 5255 1105 * 5136 3806 5447 2697 6208 * 5165 * * * 6119 * 5419 3246 9 9 7326 * 1585 585 * 0 6253 1000 1000 S 10 5834 6680 4674 * 6455 * 4912 * 6008 5589 6521 3762 5913 5731 5111 1648 1379 * * * 10 0 * * * * 0 * 6523 0 1000 S 11 3685 * 3080 4186 6021 5488 7262 5741 2921 6592 * 4796 2665 3969 3662 3503 3932 4764 5903 * 11 0 * * * * * * 6719 0 0 E 12 3546 * 4019 2012 4917 * 4174 6472 4941 4358 6715 5857 4810 3304 4845 3753 4541 5327 5008 4260 12 21 6140 * 0 * * * 6719 1000 0 Q 13 4642 * 5992 3030 * * 6485 6913 * 6472 * 5443 * 594 * * 4073 5540 * 5333 13 12 6872 * 3170 170 * * 6719 1000 0 L 14 5880 * * * * * * 3562 2585 1644 5260 * * 6226 3605 4164 3425 2825 * * 14 0 * * * * * * 6719 0 0 A 15 3118 6510 3681 3357 * 5449 5180 6860 3074 5168 4982 3429 4681 2588 4257 4336 4468 7038 * 6936 15 0 * * * * * * 6719 0 0 R 16 2939 * * 2880 4626 6077 6022 2171 5214 3853 5582 6026 * 5642 4807 7339 3958 2456 * * 16 10 7149 * 3170 170 * * 6719 1000 0 A 17 6857 * * * 6442 * * 6226 * 189 4181 * 6510 * * * * * 5438 * 17 0 * * * * * * 6719 0 0 K 18 * * 6292 838 6846 * 6627 * 3582 4164 5106 4105 * 3576 3948 * 6911 6032 * 6590 18 18 6374 * 1585 585 * * 6719 1000 0 R 19 3258 * 4685 3113 6686 5158 5582 6996 2742 5304 * 3886 6389 3258 3161 2732 5153 5306 * * 19 0 * * * * * * 6719 0 0 E 20 3022 5457 * 2701 4067 * 4317 3389 4465 3843 6060 6374 * 4813 5898 4650 5020 3514 4849 3213 20 0 * * * * * * 6719 0 0 F 21 * * * * 553 * 4831 * * 5641 * * * * * * * * 5741 2033 21 17 6421 * 1585 585 * * 6719 1097 0 N 22 3142 * 3750 2785 * 6365 4489 * 3661 3707 5633 3962 * 2344 4043 3834 5352 6686 * 6860 22 0 * * * * * * 6719 0 0 E 23 4306 6692 4560 3165 6720 7082 * 4226 2553 4654 6293 3990 * 3037 3779 4145 3525 4384 * 4512 23 120 3652 * 1665 547 * * 6719 2923 0 N 24 6915 4262 3108 4217 * 5949 4977 * 5004 * * 1192 * 4696 6430 3842 3178 6592 * 6334 24 0 * * * * * * 6719 0 0 R 25 3578 * 5039 6592 * 6715 3595 5208 3271 * 6564 3843 1774 4261 3666 3549 3975 * * * 25 0 * * * * * * 6719 0 0 Y 26 5196 5106 * * 3204 * 3242 * 4199 6709 6506 5265 * * 4229 4067 4174 5768 6734 1210 26 0 * * * * * * 6719 0 0 L 27 5525 * * * * * * 3242 * 2964 * * 537 * 5275 * * 5081 * * 27 24 5949 * 1000 1000 * * 6719 1000 0 T 28 5809 * 2296 * * 5947 * 5275 6008 * * 3118 5220 * 6710 1613 2045 * * * 28 0 * * * * * * 6719 0 0 E 29 3310 * 5564 4171 6831 4084 4865 5677 2869 3910 5109 5746 3585 5876 2607 3294 4440 5745 6761 6720 29 0 * * * * * * 6719 0 0 R 30 2936 * 4341 2251 5056 5438 6659 4283 3724 5496 * 4189 4842 3210 4890 4620 5576 4341 6831 4426 30 14 6734 * 2000 415 * * 6719 1000 0 R 31 4052 * 3750 1914 * * 5326 4903 3296 4464 6590 6761 * 2893 3280 6164 3469 4922 * * 31 0 * * * * * * 6719 0 0 R 32 4782 5134 * 6723 6389 * * 3513 2386 4738 4324 * * 4810 1135 6673 5186 5694 * * 32 0 * * * * * * 6719 0 0 Q 33 3376 * 4911 2378 7195 5410 5019 3377 3023 5363 5568 4640 * 2907 4030 5769 4482 6472 5727 5360 33 0 * * * * * * 6719 0 0 Q 34 3458 * 4066 1734 7163 * 5175 4245 3599 4904 4872 5205 * 3766 3746 4708 4251 5801 * 5190 34 0 * * * * * * 6719 0 0 L 35 5949 * * * * * * 2011 * 610 4388 * * * * * * 5748 * 6140 35 0 * * * * * * 6719 0 0 S 36 569 5095 * * 6293 4988 * * * * 6374 6026 * * * 2819 5756 3946 * * 36 0 * * * * * * 6719 0 0 S 37 3943 5727 4267 2934 * 5757 6112 4508 2843 4579 4311 3505 * 3816 2947 4586 5057 4229 * 6485 37 0 * * * * * * 6719 0 0 E 38 3531 * 5577 2924 4851 * 5276 5438 2434 3223 6788 6936 6421 3363 3321 4806 4214 4606 5145 * 38 9 7340 * 3000 193 * * 6719 1000 0 L 39 5824 4037 * * 5560 4276 * 2915 * 1297 4528 6021 * * * 6028 2472 4194 * * 39 9 7262 * 0 * * * 6719 1000 0 G 40 5949 * 3410 4749 * 1475 4534 7118 3839 * 6894 2399 * 3723 6378 3678 6872 * * * 40 55 4746 * 2844 216 * * 6719 2495 0 L 41 5214 * * * 6442 6421 * 2991 * 1037 2597 * * * * 4846 5208 3319 * 6709 41 0 * * * * * * 6719 0 0 N 42 5596 * 3427 4396 * 5542 * * 4577 5401 * 4725 3154 5130 4722 1713 2119 * * * 42 0 * * * * * * 6719 0 0 E 43 4051 * 5224 1628 * 6365 * 6702 3577 3651 6293 5551 2845 7213 5027 5405 4047 4515 * 3926 43 0 * * * * * * 6719 0 0 A 44 4422 6037 4970 4097 * * 4983 4925 2410 5909 * 5094 6370 4555 2027 2734 3338 * * * 44 12 * 6943 * * * * 6719 0 0 Q 45 5330 * * 4316 * * 5653 6714 6420 * * 3991 * 1457 2652 3443 3422 3315 6387 * 45 48 4922 * 3246 161 * 0 6716 2048 1000 I 46 * * 6433 * * * * 1421 * 4690 * * * * * * * 795 * * 46 25 5882 * 2000 415 * 0 6279 1000 1000 K 47 4975 * 5191 3981 * 6067 * 6926 1914 * 5416 4954 * 2162 3128 3793 4589 4500 * 4734 47 7 7635 * 0 * * 0 6279 1000 1000 I 48 5644 * 6332 5702 5067 * 5075 2388 * * 5745 2433 * * 6600 4288 2722 1905 * 6156 48 0 * * * * * 0 6264 0 1000 W 49 * * * * 4949 * * * * * * * * * * * 5864 * 101 5809 49 0 * * * * * 0 6269 0 1000 F 50 * * * * 102 * * 6753 * 5181 * * * * * * * 6199 * 5794 50 0 * * * * 0 * 6283 0 1000 Q 51 3405 5060 * * 5909 6157 4306 5892 3084 6558 4498 6621 * 1027 5413 4688 5517 * * 5660 51 0 * * * * * * 6319 0 0 N 52 * * 5912 * 5907 * 4831 * 4623 * * 218 * 5898 6116 * * * * * 52 0 * * * * * * 6403 0 0 K 53 3900 6437 * 6397 * * 3776 * 2289 * * 6155 * 3590 1133 6409 4145 * * 6564 53 0 * * * * * * 6253 0 0 R 54 * * * * * * * * 5043 5417 * * * * 80 * * * * * 54 28 * 5684 * * * * 6253 0 0 A 55 1692 * * 4254 5365 * * 5310 5093 5319 3465 5090 * 3214 3040 3495 3943 5453 * 6884 55 0 * * * * 0 * 6178 0 1698 K 56 4642 * * 5314 * * 6241 * 1272 6698 * 5245 * 5617 1426 5651 5628 5612 * 5781 56 20 6158 * 2000 415 * * 6179 1000 0 I 57 3477 * 3144 2724 5355 6414 6351 4666 4864 2702 3885 4761 6443 3934 * 4019 4704 * 4069 5122 57 0 * * * * * * 6091 0 0 R 58 * * * * * * * * 615 * * 5988 * * 1594 * * * * * 58 0 * * * * * * 6082 0 0 R 59 * * * * * * 5977 * 1216 * * 5933 * 5652 1010 5573 * * * * 59 0 * * * * * * 5810 0 0 S 60 2115 * * * * * * * * * * 2377 * * * 1747 1843 * * * 60 0 * * 0 * * * 4867 0 0 //