HHsearch 1.5 NAME d1zpya1 FAM FILE d1zpya1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1zpya1.a3m DATE Mon Mar 8 15:41:33 2010 LENG 91 match states, 91 columns in multiple alignment FILT 46 out of 50 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.7 EVD 0.4429 0.3519 SEQ >ss_dssp CCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTCCSCSCC >sa_dssp EDCEEDDEECDEEDCDCCDBDCCBEECDECCDCCDEDBEECEDEEDCEDBCECCDDCDECBEECCCDACEDCEDDCDDCEEDDEDEEEEEE >ss_pred CCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCC >ss_conf 9531456746855225999999999999999999999985899999999999999999999999999997179999999998522477569 >Consensus xgxxepxexlxxexxdxxrlrxslixEleAInxYxqxaxxtxdxxxkxvlxhiaxEEkxHxgxxlxlLrrxdpexxxxLkxxlftxxxixx >d1zpya1 DGYFEPTQELSDETRDXHRAIISLREELEAVDLYNQRVNACKDKELKAILAHNRDEEKEHAAXLLEWIRRCDPAFDKELKDYLFTNKPIAH >UniRef50_Q1D6H3(17-82:164) Putative uncharacterized protein n=2 Tax=Cystobacterineae RepID=Q1D6H3_MYXXD E=7e-05 s/c=0.73 id=31% cov=60% ---------------DVARIRLVLARELETINEYEAYARASSNPEVRAFFQHLAAEEKEHVSEAVHMLR---------------------- >UniRef50_Q12X29(9-87:89) Ferritin family protein n=3 Tax=Methanosarcinaceae RepID=Q12X29_METBU E=7e-13 s/c=0.95 id=31% cov=88% ------PENVNKEDLDKELIRIGMIAELDAVNFYKQMTPLTKDEDLKAVLLEVAREEMVHIAMFETVLMEVDSVYLKVLADYSLT------ >UniRef50_D1N1I1(9-88:102) Rubrerythrin n=9 Tax=cellular organisms RepID=D1N1I1_9BACT E=8e-06 s/c=0.65 id=31% cov=79% EGLHHDRKVTEPELI---RAIRFMIAsEYEATQLYMQLAESTDNKLAKAVLVDVADEERVHAGEFLRLLHELAPD----------------- >UniRef50_B9MNL9(25-87:122) Putative uncharacterized protein n=4 Tax=Bacteria RepID=B9MNL9_ANATD E=1e-08 s/c=0.97 id=36% cov=62% --------------------------ELEAIFIYDAHVQATDDQVAKRVIANIRDEEKAHVGELMTLLRILDPEEAEHFLE---------- >UniRef50_B1BD69(18-87:171) Rubrerythrin family protein n=3 Tax=Clostridium RepID=B1BD69_CLOBO E=2e-11 s/c=1.00 id=31% cov=77% -----------------SKLREDMIGELVAINDYSFIISNCSIKEINDVLSHIRQEEHNHYGMLLKLLRKYDPmEMDAYLKVISHTD----- >UniRef50_A1HPA7(136-199:208) Putative uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPA7_9FIRM E=0.0004 s/c=0.72 id=38% cov=53% ---------------TIHYLTKSLAGELEATNKYQTYMVQAQHDEVKALFCHIMNEEKEHIA----------------------------- >UniRef50_A4WHF5(13-94:373) Uncharacterized linocin/CFP29-like protein n=11 Tax=Archaea RepID=A4WHF5_PYRAR E=7e-18 s/c=1.12 id=28% cov=79% ----------SGEIADS--LRLAIMAELDAISLYLQLARLIDDERVRKVFEDIAKEEKTHFGEFLALLKHIDPEQVEQLKAGL-------- >UniRef50_A1HPA7(27-99:208) Putative uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPA7_9FIRM E=0.0006 s/c=0.62 id=24% cov=81% -----PRDTMCPDDPDLLRLRDAAKDEREAIDLYLEAALRTPMADL---FLDAAEDEMHHYMELMRLISSLDPVQATMLKE---------- >UniRef50_A0LFA4(223-275:278) Rhodanese domain protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFA4_SYNFM E=1e-06 s/c=1.03 id=33% cov=56% ---------------------IAMMVESQALDLYLRMGAASSNEKTRRILFHIADEEKAHLSMLAELLEKK-------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * D 1 * * 1545 605 * * * * * * * * * * * * * * * * 1 0 * * * * * * 2333 0 0 G 2 * * * * * 275 * * * * * * * 2529 * * * * * * 2 0 * * * * * * 2468 0 0 Y 3 3123 * * * 3234 * * * * 1402 * * * * * * * * * 1320 3 0 * * * * * * 2604 0 0 F 4 * * * * 2629 * 698 * 3772 * * * * * * * * * * 2750 4 0 * * * * * * 2690 0 0 E 5 * * 2400 650 * * 3188 * * * * * * * * * * 3975 * * 5 78 * 4254 * * * * 3066 0 0 P 6 3370 * 3479 * * * * * * * * * 864 * 5010 2458 * 4288 * * 6 0 * * * * * 0 3498 0 1000 T 7 3214 * * * * 4402 * * * 3647 3033 * 2441 * 2134 2401 4589 * * * 7 0 * * * * 0 * 3545 0 1000 Q 8 * * 2889 1032 * 4285 * * 2554 * * * * 4809 * * 4041 4111 * * 8 0 * * * * * * 3502 0 0 E 9 * * 3493 2667 * * * * 3014 4041 * 2168 * * 4629 3233 3442 3212 * * 9 0 * * * * * * 3502 0 0 L 10 * * * * * * * 4171 * 814 3442 * * * * * 2543 3156 * * 10 0 * * * * * * 3502 0 0 S 11 * 3589 * 3416 * * * * 3764 * * 3419 3721 * 2872 1172 * * * * 11 0 * * * * * * 3439 0 0 D 12 * * 5039 2041 * 3193 * 5683 2496 4722 * 4433 2824 2358 * * * * * * 12 0 * * * * * * 3439 0 0 E 13 * * 3112 748 * * * * 3162 * * 4433 * * 3583 4393 * * * * 13 0 * * * * * * 3439 0 0 T 14 4710 * 1567 * * * * 3138 3456 4432 * * * * * * 2298 2557 * * 14 0 * * * * * * 3467 0 0 R 15 3312 5702 * * 4449 * * 3047 2559 2625 4464 * 3607 * 2462 * * 3784 * * 15 68 * 4432 * * * * 3467 0 0 D 16 * * 529 3564 * * * * * * * 3996 * * * * 2647 * * * 16 0 * * * * * 0 3733 0 1000 X 17 4220 * * 4117 3438 * * 2645 2813 2441 6032 * * 3757 3902 5332 * 3323 * 5099 17 36 * 5332 * * * 0 3748 0 1000 H 18 3040 * * 2303 * * 2027 4351 * 3067 * * * 5084 * 2670 3728 * * * 18 0 * * * * 1023 977 3871 0 1502 R 19 * * * 3823 4605 * * 4219 4227 4011 * * * * 724 * * 5169 * 3543 19 0 * * * * 0 * 4013 0 1000 A 20 1692 * * * * * * 3004 * 1315 2990 * * * * * 6410 5254 * * 20 67 * 4460 * * * * 3955 0 0 I 21 * * * * * * * 1572 * 4955 * * * * 850 * 4484 4963 * * 21 0 * * * * * 0 3942 0 1186 I 22 3674 * 4294 2283 * * * 2904 4517 2986 * * * 3705 2807 * 3474 4261 * * 22 0 * * * * 0 * 4020 0 1186 S 23 1550 * 4519 * 4179 3406 * 4238 * * * * * * * 1491 * 4147 * * 23 0 * * * * * * 4086 0 0 L 24 4409 * * * * * * 2505 * 1297 1828 * * * * * 5662 3869 * * 24 0 * * * * * * 4111 0 0 R 25 3390 * * * * * * 988 4409 * 2612 * * * 3208 * * 3618 * * 25 102 3868 * 1657 550 * * 4111 1619 0 E 26 1323 * 4409 1777 * 3600 * * * 4455 * * * * 4136 4596 * 4831 * * 26 40 5176 * 0 * * * 4111 1000 0 E 27 * * * 0 * * * * * * * * * * * * * * * * 27 0 * * * * * * 4083 0 0 L 28 3012 * * * * * * 2821 * 783 * * * * 4942 5217 * 5466 * 3809 28 0 * * * * * * 4066 0 0 E 29 * * 1893 1044 * * * 4380 * * * * * 3365 * * * 3314 * * 29 0 * * * * * * 4066 0 0 A 30 72 * * * * * * * * * * * * * * * 4368 * * * 30 0 * * * * * * 4066 0 0 V 31 * * * * * * * 654 * 4090 3631 * * * * * 4275 2529 * * 31 0 * * * * * * 4066 0 0 D 32 * * 1873 * 4232 4125 * 5453 * * 4561 1181 * 3809 * 4692 * * * * 32 0 * * * * * * 4066 0 0 L 33 * * 3935 4368 3558 3238 * 5277 4923 1220 * * * * * * * 5688 2926 4148 33 0 * * * * * * 4066 0 0 Y 34 * * * * * * * * * * * * * * * * * * * 0 34 0 * * * * * * 4066 0 0 N 35 4133 * 3122 2110 * * 4583 * 5351 2512 5741 3664 * 2754 5680 3800 5806 * * * 35 0 * * * * * * 4066 0 0 Q 36 2803 * * 3461 4767 * 5115 * 4830 * * * * 1038 3364 4378 4921 * * * 36 0 * * * * * * 4066 0 0 R 37 3282 * * * 5115 * 2489 4252 * 2770 3109 * * 4267 2048 * * * * 3618 37 0 * * * * * * 4066 0 0 V 38 1000 * * * * 4041 * 2810 * 3700 4087 5789 * * * 4972 5349 4085 * 5186 38 0 * * * * * * 4066 0 0 N 39 2740 * 2720 3457 * * * * 3636 3956 5450 4447 5349 4229 2880 3080 5115 4921 * * 39 0 * * * * * * 4066 0 0 A 40 1720 * 5673 4830 5115 6285 * * * 2213 * 3560 * 4921 3817 3318 * 4370 * 4410 40 0 * * * * * * 4066 0 0 C 41 2959 3532 * 4185 3928 * * 3296 * * * * * * * 2679 1356 5995 * * 41 0 * * * * * * 4066 0 0 K 42 4830 * 1800 3749 * * * * 2129 * * 3665 4939 4921 * 2717 3676 * * * 42 0 * * * * * * 4066 0 0 D 43 * * 734 * * * 4921 4767 * 4830 3632 2229 * * * * * * * * 43 0 * * * * * * 4066 0 0 K 44 3839 * 4249 1695 * * * 4378 2498 * * * 2034 5274 * * * 3765 * * 44 0 * * * * * * 4066 0 0 E 45 4207 5803 2705 1419 5854 * 5916 * 3628 3864 * 3707 * 4370 4322 5927 * 5274 * * 45 0 * * * * * * 4066 0 0 L 46 2242 * * * * * * 3113 * 1917 * * * * * 4972 3937 1684 * * 46 48 * 4939 * * * * 4066 0 0 K 47 * * * * * * * * 997 * * 3491 * 5676 1431 * 5667 * * * 47 0 * * * * * 0 4017 0 1000 A 48 1295 * 3467 3204 * * 5375 5863 2428 * * * * 5676 3376 5901 6396 * * 5521 48 0 * * * * * 0 4017 0 1000 I 49 * * * * 3483 * * 1538 * 3124 * * * * * * * 1147 * * 49 0 * * * * 0 * 4017 0 1000 L 50 * * * * 2097 * 4267 5274 * 1198 2935 * * * * * * 3762 4378 * 50 0 * * * * * * 4066 0 0 A 51 3155 4921 4167 2390 5216 * 3157 4144 * 2513 6035 * * 2964 * 4767 5450 5737 * 5987 51 0 * * * * * * 4066 0 0 H 52 4704 * 1561 5349 * * 1042 * 4972 * * 3629 * * * * * * * * 52 0 * * * * * * 4066 0 0 N 53 3513 * * * * * * 941 * 4367 4704 2420 * * * * * 3085 * * 53 0 * * * * * * 4066 0 0 R 54 1144 * * * * * * * * * 2610 * * 4185 1959 * 4146 6055 * * 54 0 * * * * * * 4066 0 0 D 55 4367 * 1726 3883 * 5100 * * 2625 4378 * 2724 * 4767 2699 * * * * * 55 0 * * * * * * 4066 0 0 E 56 * * 2659 282 * * * * 5716 * * * * * * * * * * * 56 0 * * * * * * 4066 0 0 E 57 * * * 0 * * * * * * * * * * * * * * * * 57 0 * * * * * * 4066 0 0 K 58 * * * * 4185 * 4767 2677 832 5673 3434 * * * 4052 * * 5803 * * 58 0 * * * * * * 4066 0 0 E 59 3184 * * 1596 * * 4939 * 4185 * * 4767 * * 3236 4704 2496 3146 * * 59 0 * * * * * * 4066 0 0 H 60 * * * * * * 0 * * * * * * * * * * * * * 60 0 * * * * * * 4066 0 0 A 61 1834 * * * 2726 * * 3076 * 3586 5179 * * * * * * 2683 * 2449 61 0 * * * * * * 4071 0 0 A 62 1862 5660 * 4361 * 1033 * * * * 4933 * * * * 3722 * 4078 * * 62 0 * * * * * * 4071 0 0 X 63 * * * 1288 * * * * * 3367 1688 * * 3299 * 4953 4343 * * * 63 0 * * * * * * 4049 0 0 L 64 4333 5415 5086 * 1320 4880 * 5599 * 1699 * 5195 * * * * 5676 3514 * * 64 0 * * * * * * 4038 0 0 L 65 3741 * * 4356 * * * 3775 * 792 3398 * * 4017 * * * 4386 5557 * 65 0 * * * * * * 4105 0 0 E 66 3206 * * 1456 * * 4386 * 4204 * * 4349 * 4193 2705 * 2576 * * * 66 0 * * * * * * 4105 0 0 W 67 3863 * * * 4086 * * * * 833 4386 * * * * * * 3964 2328 * 67 0 * * * * * * 4105 0 0 I 68 * * * * * * * 3107 * 224 5163 * * * * * * * * * 68 0 * * * * * * 4105 0 0 R 69 5506 * 4540 4344 * * 5246 * 2988 2795 5050 * * * 1011 4797 * * * 5206 69 0 * * * * * * 4023 0 0 R 70 5569 * * 3042 * 5986 4500 5101 2782 * * 4732 * 4354 1220 3798 4823 * * * 70 0 * * * * * * 3972 0 0 C 71 * 5921 * 5342 5542 * 3210 4297 3621 1625 * 5163 * 4789 4032 5446 4481 4992 * 2750 71 0 * * * * * * 3972 0 0 D 72 5046 * 482 5374 * * * 4135 4689 5414 * 4813 * * * 4335 * * * 5288 72 0 * * * * * * 3815 0 0 P 73 5083 * * 4491 * * * 5491 2842 * * * 635 * * 3055 * * * * 73 63 4554 * 0 * * * 3815 1000 0 A 74 2716 * 3230 1188 * * * * 5048 * * * * 3806 4364 * * 2716 * * 74 0 * * * * * * 3805 0 0 F 75 * * * 3458 3001 * * 4906 * 3087 3310 * * 1891 * * 5011 * 2437 4409 75 0 * * * * * * 3617 0 0 D 76 2197 * 1620 3661 * * 4821 * 4877 4267 * * * * 3489 * * 2580 * * 76 0 * * * * * * 3608 0 0 K 77 2435 * 4867 1671 * 5017 4840 * 2805 5226 * * * 3901 4796 * 2964 * * * 77 0 * * * * * * 3608 0 0 E 78 3791 * * 1139 * * 2955 * * 4481 4103 4821 * 4139 * * 5162 4267 * 3844 78 0 * * * * * * 3608 0 0 L 79 4452 * * * 4370 * * * * 329 3943 * * * * * * * * 4481 79 0 * * * * * * 3608 0 0 K 80 4069 * * 3724 * * 3754 * 964 4248 * * * 4301 2516 * * * * * 80 0 * * * * * * 3635 0 0 D 81 3167 * 2902 1391 * 4254 * * 2629 * * * * * * * 3612 3686 * * 81 0 * * * * * * 3642 0 0 Y 82 * * * * 4206 3320 * 1460 * 4120 * * * * * * * * * 1236 82 0 * * * * * * 3104 0 0 L 83 * * * * * * * * * 382 * * * * * 2104 * * * * 83 0 * * * * * * 3104 0 0 F 84 * * * * 574 * 2905 * * 2939 * * * * * * * * * 3961 84 0 * * * * * * 2934 0 0 T 85 * * * * * * * * 3066 * * * * * * 2466 515 * * * 85 0 * * * * * * 2934 0 0 N 86 * * 2164 1269 * * * * 3560 * * 3073 * * * * 2660 * * * 86 0 * * * * * * 2660 0 0 K 87 * * * * * 550 * * 2128 * * * * * * * * 3503 * * 87 0 * * * * * * 2478 0 0 P 88 * * 1808 3317 * * * * * * * * 1250 * * 2368 * * * * 88 0 * * * * * * 2399 0 0 I 89 * * * * * * * 175 * * * * * * * * * 3127 * * 89 0 * * * * * * 2399 0 0 A 90 0 * * * * * * * * * * * * * * * * * * * 90 0 * * * * * * 1349 0 0 H 91 * * * * * * 0 * * * * * * * * * * * * * 91 0 * * 0 * * * 1000 0 0 //