HHsearch 1.5 NAME d1z0kb1 FAM FILE d1z0kb1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1z0kb1.a3m DATE Mon Mar 8 22:08:04 2010 LENG 61 match states, 61 columns in multiple alignment FILT 17 out of 21 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.0 EVD 0.4613 2.3395 SEQ >ss_dssp CCCCCCSSTTCSCCCSSHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCC >sa_dssp EEDECEEDDEEDEECECECCCDBDCBDBCBECAEEDEDDECBEECDDDCDDBDEDCEDEEE >ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 9867111257776654738999999999999999702677999999999999999997319 >Consensus xGWsPxxvxxxxxxxxdPLieQixxikxyixQAkxaxRxdEVxxLexNLreLxxexxxqqx >d1z0kb1 EGWLPLSGGQGQSEDSDPLLQQIHNITSFIRQAKAAGRMDEVRTLQENLRQLQDEYDQQQT >UniRef50_UPI000186EED8(440-499:513) Rabenosyn-5, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186EED8 E=3e-05 s/c=0.83 id=43% cov=98% DGWTPKVSQSAFGIISDhPIIQQINIIKGYIKQAESANRFEEVTTLQQNLRDLEEEFWRQ-- >UniRef50_UPI0000D56713(371-429:434) PREDICTED: similar to rabenosyn-5 n=1 Tax=Tribolium castaneum RepID=UPI0000D56713 E=4e-17 s/c=1.51 id=42% cov=98% -GWSPAAVSNENTETEDPLIEQMNIVRNYIDQARKAQRFEEVASLQENLKMLKETYKQQQ- >UniRef50_UPI0000DB7280(444-503:510) PREDICTED: similar to FYVE-finger-containing Rab5 effector protein rabenosyn-5 n=2 Tax=Apocrita RepID=UPI0000DB7280 E=4e-17 s/c=1.48 id=39% cov=100% QGWGPSSVTPIMPSSMDPIIEQMSNLRAYIKQAKADCRYDEVATLESNLKELQSAYFTMK- >UniRef50_C3YPL0(452-512:519) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YPL0_BRAFL E=7e-16 s/c=1.40 id=48% cov=100% KGWTPAvDSSSVATTETDPMLQQMDIIRSFVDQARAAGRLDEVEMLEANLRELQQEYWRQH- >UniRef50_Q9N3Y4(492-555:563) Rabenosyn (Trafficking protein) homolog protein 5, partially confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q9N3Y4_CAEEL E=3e-05 s/c=0.78 id=32% cov=92% DGWSaedndlvfePSSIEDDTIQTDHPLYEQREQLRKFLFQASATGKLDEMDILERNLKEIEEE------ >UniRef50_Q29MW0(431-490:510) GA21126 n=3 Tax=Sophophora RepID=Q29MW0_DROPS E=7e-14 s/c=1.30 id=36% cov=97% --WSAPQASTSKSGLDDPLIEQINIIKGYIKQARQDMNFEVVETLELNLRELQREVYERQ- >UniRef50_A8Q0K3(513-575:583) FYVE zinc finger family protein n=1 Tax=Brugia malayi RepID=A8Q0K3_BRUMA E=3e-11 s/c=1.10 id=33% cov=95% -GWTPSRMflhtnpFVEEEEKANPLEEQIFIIKGYLKQAVEDSRLEEVEILERNLCDLEHEIEK--- >UniRef50_UPI00006A5208(422-486:582) PREDICTED: similar to Rabenosyn-5 (FYVE finger-containing Rab5 effector protein rabenosyn-5) (Zinc finger FYVE domain-containing protein 20) (110 kDa protein) n=1 Tax=Ciona intestinalis RepID=UPI00006A5208 E=4e-11 s/c=1.07 id=34% cov=100% KGWRANTVNQnsnqfGNPFETNPLLEQINYVQQMLKQAKSENRFEEIESLNRNLRELENELKRQE- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * E 1 * * 1130 3325 * * * * 2125 * * * * 2225 * * * * * * 1 0 * * * * * * 2774 0 0 G 2 * * * * * 115 * * * * * 3709 * * * * * * * * 2 0 * * * * * * 3124 0 0 W 3 * * * * * * * * * * * * * * * * * * 0 * 3 0 * * * * * * 3183 0 0 L 4 * * * * * 2852 * * 3995 3187 * * * * 3562 1294 2348 * * * 4 141 3422 * 3170 170 * * 3183 1000 0 P 5 2659 * * * * 3844 * * * * * * 373 * * * * * * * 5 0 * * * * * * 3183 0 0 L 6 2523 * * * * * * * 3976 4071 * 3562 3763 * * 1527 2822 4148 * * 6 88 4083 * 0 * * * 3183 1000 0 S 7 2546 * 4083 * * * * * * * * * * 2217 3759 1857 2825 3976 * * 7 184 4313 3844 0 * * * 3183 1000 0 G 8 3631 * * * * 3982 * 3355 * * 3671 4023 * * * 2415 * 1215 * * 8 118 3671 * 2585 263 0 * 3148 1000 1000 G 9 2102 * * 3422 3759 4071 * * * * * 3562 * 3976 * 1979 2852 * * * 9 0 * * * * * * 3183 0 0 Q 10 * * 3422 * * * 3844 * * * * 2600 3905 2273 * 2480 3763 2780 * * 10 128 3562 * 2322 322 * * 3183 1000 0 G 11 3976 * 2681 2294 * 1887 * 3905 * * * * * * * 3763 4313 3115 * * 11 93 3995 * 1000 1000 * * 3183 1000 0 Q 12 4083 * * 3759 3976 * * * 2782 * 3905 2326 * 3033 4313 4142 2618 * * * 12 0 * * * * * * 3183 0 0 S 13 2388 * * 3759 * 2909 * 3422 * * * * 2723 * * 2399 2577 * * * 13 198 * 2964 * * * * 3183 0 0 E 14 * * * 1831 3367 2136 * 3796 * 3826 * * * 3236 * 3651 3917 * * * 14 98 * 3923 * * * 0 3097 0 1531 D 15 * * 3799 2519 * * * 3726 3462 2731 * * * * * 2615 1870 * * * 15 0 * * * * 0 * 3068 0 1793 S 16 3759 * 1572 4101 * * * * * * 3905 * * 4142 * 1919 2799 * * * 16 0 * * * * * * 3183 0 0 D 17 * * 532 * * * 3422 * * * * 2218 * * * * * * * * 17 95 3976 * 0 * * * 3183 1000 0 P 18 * * * * * * * * * * * * 0 * * * * * * * 18 0 * * * * * * 3183 0 0 L 19 * * * * * * * 2376 * 636 3189 * * * * * * 4199 * * 19 0 * * * * * * 3286 0 0 L 20 * * * 3802 * * * 1448 * 1461 * * * * * * * 3197 * 3480 20 0 * * * * * * 3286 0 0 Q 21 * * 4167 1168 * * * * * 4183 * * * 1171 * * * * * * 21 0 * * * * * * 2967 0 0 Q 22 * * * * * * * * * * * * * 0 * * * * * * 22 0 * * * * * * 2967 0 0 I 23 * * * * * * * 760 * * 1632 * * * 3528 * * * * * 23 0 * * * * * * 2967 0 0 H 24 * * 2586 2269 4053 4183 4331 * * * * 1304 * * * 4156 * * * * 24 0 * * * * * * 2967 0 0 N 25 * * * * * * * 1011 * * * 1538 * 3528 * * * * * 3784 25 0 * * * * * * 2967 0 0 I 26 * * * * * * * 740 * 2181 * * * * * * * 2468 * * 26 0 * * * * * * 2967 0 0 T 27 * * * * * * * * 1266 * * * * 3113 1473 4089 4331 * * * 27 0 * * * * * * 2967 0 0 S 28 2522 * * * * 1812 * * 3528 * * 3264 * 3784 * 1848 * * * * 28 0 * * * * * * 2967 0 0 F 29 * * * * 2133 * * * * * 3784 * * * * * * * * 516 29 0 * * * * * * 2967 0 0 I 30 * * * * * * * 666 * 1638 * * * * * * * 4363 * * 30 0 * * * * * * 2967 0 0 R 31 * * 3307 * 2289 * * * 1497 * * 4089 * 3686 2297 * * * * * 31 0 * * * * * * 2967 0 0 Q 32 * * 3084 * * * * * * * * * * 181 * * * * * * 32 0 * * * * * * 2967 0 0 A 33 0 * * * * * * * * * * * * * * * * * * * 33 0 * * * * * * 2967 0 0 K 34 * * * 4366 * * * * 1232 * * * * 4089 1644 3528 * 4053 * * 34 0 * * * * * * 2967 0 0 A 35 1752 * * 1529 * * * * 4254 4027 * * * 3037 * 3046 * * * * 35 0 * * * * * * 2967 0 0 A 36 886 4143 2461 3784 * * * * * * * * * * * 4027 3528 * * * 36 0 * * * * * * 2967 0 0 G 37 * 4156 * * * 1467 * * 3686 4167 3938 3046 * 4254 3350 4053 * * * 4274 37 0 * * * * * * 2967 0 0 R 38 * * * * * * * * 2605 * * 3938 * * 376 * * * * * 38 0 * * * * * * 2967 0 0 M 39 * * * * 1238 * * * * 1673 3431 * * * * * * * 4089 3169 39 0 * * * * * * 2967 0 0 D 40 * * 632 1495 * * * * * * * * * * * * * * * * 40 0 * * * * * * 2967 0 0 E 41 * * * 97 * * * * * * * * * * * * * 3938 * * 41 0 * * * * * * 2967 0 0 V 42 * * * * * * * 2734 * * 3528 * * * * * * 390 * * 42 0 * * * * * * 2967 0 0 R 43 1671 * 3528 1455 * * * * 3686 * * 4089 * * 4331 * 4366 * * * 43 0 * * * * * * 2967 0 0 T 44 * * * * * * * 2307 * 4027 2733 * * * * 2501 1502 4143 * * 44 0 * * * * * * 2967 0 0 L 45 * * * * * * * * * 0 * * * * * * * * * * 45 0 * * * * * * 2967 0 0 Q 46 * * * 602 * * * * * * * 3784 * 2731 * 4027 4143 * * * 46 0 * * * * * * 2967 0 0 E 47 2622 * * 1839 * * * * * 3938 * * * 3187 1613 4156 * * * * 47 0 * * * * * * 2967 0 0 N 48 * * * * * * * * * * * 0 * * * * * * * * 48 0 * * * * * * 2967 0 0 L 49 * * * * * * * * * 0 * * * * * * * * * * 49 0 * * * * * * 2967 0 0 R 50 * 4053 * * * * * * 1694 * * * * 4274 934 4167 * * * * 50 0 * * * * * * 2967 0 0 Q 51 * * 2578 714 * * * * * * 4254 * * 3431 * * * * * 3686 51 0 * * * * * * 2967 0 0 L 52 * * * * 3686 * * 3528 * 259 * * * * * * * * * * 52 0 * * * * * * 2967 0 0 Q 53 * * * 1899 * * * * 2607 3686 * 4274 * 1385 * * 4167 * * * 53 0 * * * * * * 2967 0 0 D 54 * * 3431 1657 * * 3097 * * 3058 * 3784 * 3261 3055 4156 * * * * 54 0 * * * * * * 2967 0 0 E 55 3122 * * 650 * * * * * * * * * * * * 2553 * * 3686 55 0 * * * * * * 2967 0 0 Y 56 * * * * 3151 * * 3937 3453 2283 * * * * * * * 3844 * 1134 56 0 * * * * * * 2847 0 0 D 57 4055 * 3315 3937 3074 * * * 2882 * 4054 * * 3939 3873 3453 * * 3258 2942 57 0 * * * * * * 2847 0 0 Q 58 * * * 2890 * * 4048 * 2458 * * * * 1664 2437 4054 4007 * * * 58 0 * * * * * * 2847 0 0 Q 59 * * * 3768 * * * * * * 2361 * * 758 2832 * * * * * 59 0 * * * * * * 2789 0 0 Q 60 * * * 3325 * * 3808 * 2149 * * * * 729 * * * * * * 60 0 * * * * * * 2740 0 0 T 61 * * * * * * * * * * * * * * * * 0 * * * 61 0 * * 0 * * * 1255 0 0 //