HHsearch 1.5 NAME d1yzma1 FAM FILE d1yzma1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1yzma1.a3m DATE Mon Mar 8 22:04:42 2010 LENG 46 match states, 46 columns in multiple alignment FILT 17 out of 21 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.7 EVD 0.4734 2.8055 SEQ >ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHC >sa_dssp EEEBCEDBEDBDDDBEEBEEEEBEDDBDECDDDCEDCCEECDEDEE >ss_pred CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 9547999999999999999701577999999999999999997339 >Consensus xdPlxeQixxikxyixQAkxaxRxdEVxxLexNLreLxxexxxqqx >d1yzma1 GSPLLQQIHNITSFIRQAKAAGRMDEVRTLQENLRQLQDEYDQQQT >UniRef50_UPI00006A5208(443-486:582) PREDICTED: similar to Rabenosyn-5 (FYVE finger-containing Rab5 effector protein rabenosyn-5) (Zinc finger FYVE domain-containing protein 20) (110 kDa protein) n=1 Tax=Ciona intestinalis RepID=UPI00006A5208 E=2e-05 s/c=1.14 id=38% cov=98% -NPLLEQINYVQQMLKQAKSENRFEEIESLNRNLRELENELKRQE- >UniRef50_UPI0001791A20(387-430:443) PREDICTED: similar to Rabenosyn CG8506-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI0001791A20 E=3e-11 s/c=1.58 id=42% cov=98% -NPVVEQMNIIKNYIKQAKEAYRFDEVASLERNLQELNEEYFKMQ- >UniRef50_UPI0000E4659A(533-576:580) PREDICTED: similar to FYVE-finger-containing Rab5 effector protein Rabenosyn-5 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4659A E=2e-10 s/c=1.52 id=49% cov=98% -DPLIQQMNIISSYLNQAQEAGRWDEVNMLEANLKDLQLAYRQEQ- >UniRef50_Q9N3Y4(517-558:563) Rabenosyn (Trafficking protein) homolog protein 5, partially confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q9N3Y4_CAEEL E=0.001 s/c=1.06 id=36% cov=85% --PLYEQREQLRKFLFQASATGKLDEMDILERNLKEIEEE------ >UniRef50_Q4RJV3(687-728:728) Chromosome 9 SCAF15033, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4RJV3_TETNG E=2e-07 s/c=1.35 id=51% cov=93% ---LLQQIDNIRAYIFDAKLSGRLDEVELLSQNLRELQLTLQEQK- >UniRef50_Q7QFL1(476-520:532) AGAP000547-PA n=3 Tax=Culicidae RepID=Q7QFL1_ANOGA E=1e-10 s/c=1.50 id=43% cov=100% SDPLIDQINIVKGYIRQARAALRFEEVATLERNLSELTQEFYHRQ- >UniRef50_UPI0000DB7280(460-503:510) PREDICTED: similar to FYVE-finger-containing Rab5 effector protein rabenosyn-5 n=2 Tax=Apocrita RepID=UPI0000DB7280 E=6e-09 s/c=1.41 id=46% cov=89% -DPIIEQMSNLRAYIKQAKADCRYDEVATLESNLKELQSAY----- >UniRef50_A8Q0K3(533-575:583) FYVE zinc finger family protein n=1 Tax=Brugia malayi RepID=A8Q0K3_BRUMA E=2e-08 s/c=1.40 id=37% cov=89% ANPLEEQIFIIKGYLKQAVEDSRLEEVEILERNLCDLEHE------ >UniRef50_UPI0001926C9E(330-374:377) PREDICTED: similar to Rabenosyn-5 n=1 Tax=Hydra magnipapillata RepID=UPI0001926C9E E=2e-07 s/c=1.26 id=50% cov=100% SDPILQQIENLKSYIQQAKEAKKFDEIKTLEENLRYFLEYKSQQQ- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 1907 * * * * 2024 * * * * * * * * * 1037 * * * * 1 0 * * * * * * 1984 0 0 S 2 * * 574 * * * * * * * * 1984 * * * 3727 * * * * 2 0 * * * * * * 2511 0 0 P 3 * * * * * * * * * * * * 0 * * * * * * * 3 0 * * * * * * 2637 0 0 L 4 * * * * * * * 2425 * 620 3211 * * * * * * 4185 * * 4 0 * * * * * * 2689 0 0 L 5 * * * 4036 * * * 1517 * 1384 * * * * * * * 3180 * 3379 5 0 * * * * * * 2689 0 0 Q 6 * * 4242 1152 * * * * * 4247 * * * 1169 * * * * * * 6 0 * * * * * * 2787 0 0 Q 7 * * * * * * * * * * * * * 0 * * * * * * 7 0 * * * * * * 2787 0 0 I 8 * * * * * * * 780 * * 1627 * * * 3415 * * * * * 8 0 * * * * * * 2787 0 0 H 9 * * 2592 2225 4135 4247 4289 * * * * 1306 * * * 4184 * * * * 9 0 * * * * * * 2787 0 0 N 10 * * * * * * * 1032 * * * 1545 * 3415 * * * * * 3748 10 0 * * * * * * 2787 0 0 I 11 * * * * * * * 753 * 2152 * * * * * * * 2463 * * 11 0 * * * * * * 2787 0 0 T 12 * * * * * * * * 1303 * * * * 3078 1453 4065 4289 * * * 12 0 * * * * * * 2787 0 0 S 13 2545 * * * * 1873 * * 3415 * * 3226 * 3748 * 1834 * * * * 13 0 * * * * * * 2787 0 0 F 14 * * * * 2069 * * * * * 3748 * * * * * * * * 541 14 0 * * * * * * 2787 0 0 I 15 * * * * * * * 686 * 1605 * * * * * * * 4337 * * 15 0 * * * * * * 2787 0 0 R 16 * * 3271 * 2251 * * * 1516 * * 4065 * 3713 2318 * * * * * 16 0 * * * * * * 2787 0 0 Q 17 * * 3103 * * * * * * * * * * 178 * * * * * * 17 0 * * * * * * 2787 0 0 A 18 0 * * * * * * * * * * * * * * * * * * * 18 0 * * * * * * 2787 0 0 K 19 * * * 4391 * * * * 1231 * * * * 4065 1662 3415 * 4135 * * 19 0 * * * * * * 2787 0 0 A 20 1726 * * 1547 * * * * 4208 4049 * * * 3073 * 3034 * * * * 20 0 * * * * * * 2787 0 0 A 21 887 4159 2516 3748 * * * * * * * * * * * 4049 3415 * * * 21 0 * * * * * * 2787 0 0 G 22 * 4184 * * * 1433 * * 3713 4242 3991 3034 * 4208 3372 4135 * * * 4243 22 0 * * * * * * 2787 0 0 R 23 * * * * * * * * 2556 * * 3991 * * 383 * * * * * 23 0 * * * * * * 2787 0 0 M 24 * * * * 1248 * * * * 1660 3394 * * * * * * * 4065 3215 24 0 * * * * * * 2787 0 0 D 25 * * 619 1519 * * * * * * * * * * * * * * * * 25 0 * * * * * * 2787 0 0 E 26 * * * 94 * * * * * * * * * * * * * 3991 * * 26 0 * * * * * * 2787 0 0 V 27 * * * * * * * 2730 * * 3415 * * * * * * 404 * * 27 0 * * * * * * 2787 0 0 R 28 1683 * 3415 1474 * * * * 3713 * * 4065 * * 4289 * 4391 * * * 28 0 * * * * * * 2787 0 0 T 29 * * * * * * * 2298 * 4049 2707 * * * * 2463 1532 4159 * * 29 0 * * * * * * 2787 0 0 L 30 * * * * * * * * * 0 * * * * * * * * * * 30 0 * * * * * * 2787 0 0 Q 31 * * * 608 * * * * * * * 3748 * 2709 * 4049 4159 * * * 31 0 * * * * * * 2787 0 0 E 32 2627 * * 1829 * * * * * 3991 * * * 3210 1596 4184 * * * * 32 0 * * * * * * 2787 0 0 N 33 * * * * * * * * * * * 0 * * * * * * * * 33 0 * * * * * * 2787 0 0 L 34 * * * * * * * * * 0 * * * * * * * * * * 34 0 * * * * * * 2787 0 0 R 35 * 4135 * * * * * * 1666 * * * * 4243 937 4242 * * * * 35 0 * * * * * * 2787 0 0 Q 36 * * 2606 713 * * * * * * 4208 * * 3394 * * * * * 3713 36 0 * * * * * * 2787 0 0 L 37 * * * * 3713 * * 3415 * 269 * * * * * * * * * * 37 0 * * * * * * 2787 0 0 Q 38 * * * 1874 * * * * 2620 3713 * 4243 * 1386 * * 4242 * * * 38 0 * * * * * * 2787 0 0 D 39 * * 3394 1623 * * 3147 * * 3057 * 3748 * 3289 3114 4184 * * * * 39 0 * * * * * * 2787 0 0 E 40 3124 * * 647 * * * * * * * * * * * * 2552 * * 3713 40 0 * * * * * * 2787 0 0 Y 41 * * * * 3037 * * * 3350 2174 * * * * * * * 3749 * 1047 41 0 * * * * * * 2645 0 0 D 42 3744 * 3033 * 3661 * * * 2627 * * * * 3683 3551 3266 * * 2886 2645 42 0 * * * * * * 2686 0 0 Q 43 * * * 2614 * * 3748 * 2702 * * * * 1399 2124 * * * * * 43 0 * * * * * * 2686 0 0 Q 44 * * * 3551 * * * * * * 3661 * * 565 2645 * * * * * 44 0 * * * * * * 2686 0 0 Q 45 * * * 3270 * * 3711 * 2645 * * * * 599 * * * * * * 45 0 * * * * * * 2681 0 0 T 46 * * * * * * * * * * * * * * * * 0 * * * 46 0 * * 0 * * * 1167 0 0 //