HHsearch 1.5 NAME d1ywsa1 FAM FILE d1ywsa1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1ywsa1.a3m DATE Mon Mar 8 18:35:12 2010 LENG 82 match states, 82 columns in multiple alignment FILT 71 out of 75 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.1 EVD 0.4283 0.4425 SEQ >ss_dssp CCCCCEEETTTSEEETTTTEEEECCSSSSCEEEEHHHHHTTCCEEEETTTTEEEEEECCHHHHHHHHHHHTCCCCCCCSCCC >sa_dssp EEDEDECDBEDAEDCCEEDBABCECEDECDBCADAEDADEDDCCADACEDEEDBBAECCDEDBCEBBEEBECEECEEDEDEE >ss_pred CCEEEEEEHHHCEECCCCCEEEEECCCCCCEEECHHHHHCCCEEEECCCCCEEEEEEECHHHHHHHHHHCCCCCCCCEECCC >ss_conf 9324477676700238985799740358807973888615905886299709999997544525777531468887501149 >Consensus xxxydeVxLeDmxxdedxxxfxypCrCGdxfxitxxdLexgexvvxCxsCSLxIkVxfxxxxxxexxxeaxxxxxxxxxxxx >d1ywsa1 MSTYDEIEIEDMTFEPENQMFTYPCPCGDRFQIYLDDMFEGEKVAVCPSCSLMIDVVFDKEDLAEYYEEAGIHPPEPIAAAA >UniRef50_UPI000179247A(318-375:382) PREDICTED: similar to alkB, alkylation repair homolog 8 (E. coli) (alkbh8) n=1 Tax=Acyrthosiphon pisum RepID=UPI000179247A E=2e-09 s/c=1.10 id=24% cov=71% VTIFETLNISDLENNESEETFSYRCRCGGMFLVPKSMVDQIEPLLfPCDDCSLFIKIM------------------------- >UniRef50_B6AGA3(8-81:104) CSL zinc finger domain-containing protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6AGA3_9CRYT E=3e-09 s/c=0.85 id=34% cov=76% ---WKEIKLLDMKWfDYKMETLSYDCSCGDIFLVKIQDLemtiadpnsktQVYSIILQCESCSLKLRLIFDKESLE------------------ >UniRef50_A8Q7Y6(89-147:167) Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q7Y6_MALGO E=0.0002 s/c=0.79 id=31% cov=67% ----ETVPLECMEAVEQPTMhFQYPCRCGQAYVIAPDALVQENGYVGCMGCSETIHVVW------------------------ >UniRef50_UPI000179677E(142-192:195) PREDICTED: similar to zinc finger, CSL domain containing 3 n=1 Tax=Equus caballus RepID=UPI000179677E E=5e-07 s/c=1.09 id=23% cov=63% -----QVYLEEMSWNEDDHCFSLSCRCGGKYRVSKDEAEEVTLI-SCDTCSLIVELL------------------------- >UniRef50_B6QL75(117-195:571) DnaJ domain protein n=4 Tax=Trichocomaceae RepID=B6QL75_PENMQ E=3e-13 s/c=0.96 id=31% cov=82% ------VDLEDLIEQDDEATgsssWYRGCRCGDkkGFIVTEDELEaeaqHGEILVGCRGCSLWIKVLFAvEDDVEDQHEEANM---------- >UniRef50_A7SYK2(2-67:159) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SYK2_NEMVE E=3e-10 s/c=1.00 id=27% cov=77% --------------ENDDGSYSSPCRCGGEYVITNAHLQSGQSMVCCTTCTLSIRVlyaVFHPDKLDAAQTEKSQAVKE------ >UniRef50_Q5CUZ1(111-170:170) DnaJ domain, possible zf-CSL following (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CUZ1_CRYPV E=6e-08 s/c=0.97 id=25% cov=72% MIWHKSVNLEELEYmdEDGKEVFAYFCRCGGLIFLEKKHIEEGYNLFSCDGCSSKIMITF------------------------ >UniRef50_A5DQU6(153-224:226) Putative uncharacterized protein n=3 Tax=Saccharomycetales RepID=A5DQU6_PICGU E=2e-07 s/c=0.79 id=23% cov=76% ----DSYSLDEFELNEEELKYYKNCPrCQfpKSIQVSEADLEHGtadgtggyNLIVQCDSCSLWLIVNYYEGESED----------------- >UniRef50_A4RSH4(74-161:163) Predicted protein n=2 Tax=Ostreococcus RepID=A4RSH4_OSTLU E=3e-06 s/c=0.60 id=26% cov=71% ----------------GVDAYARACRCGDAYEIPVAELQrlrrelHDECVLECGGCSLRISVRLKPIGADEAHASARVA--------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 3715 * 1905 1042 * * * * * * 2546 * * 1 0 * * * * * * 2729 0 0 S 2 * * 3872 * * * * 2720 * * * 3312 * * * 884 2862 * * * 2 0 * * * * * * 2920 0 0 T 3 * * * * 2061 * * 2292 * * * * * * * * 3373 3868 3162 1840 3 0 * * * * * * 3071 0 0 Y 4 * * * * 2642 * 2991 * * * * * * 5652 * 4582 * * 4080 753 4 0 * * * * * * 3688 0 0 D 5 5263 * 760 1863 * * * * 3584 * * * * * * 5308 * * * * 5 0 * * * * * * 4237 0 0 E 6 * * * 1022 * * * 5388 4863 4249 * 5573 * 3795 4262 3856 2830 4579 * * 6 0 * * * * * * 4338 0 0 I 7 * * * * 3704 * 6163 1793 * 4293 * * * * * * 5294 1116 * 3595 7 0 * * * * * * 4897 0 0 E 8 4557 5758 2244 2179 * 6019 * * 4378 * * 4213 4153 5823 * 2333 5917 * * 3311 8 0 * * * * * * 4897 0 0 I 9 * * 5411 * 4847 * * 1949 * 604 * * 5330 * * * * * * * 9 0 * * * * * * 4897 0 0 E 10 4613 * 1516 1313 * 4827 * * 5192 5016 * * * * 5768 3804 * 5410 * * 10 0 * * * * * * 4910 0 0 D 11 * 5096 794 1711 * * * * * 4821 * 5680 * * * 4889 * * * * 11 0 * * * * * * 4871 0 0 M 12 * 5419 * * 1559 * * * * 2027 1454 * * * 5226 * * * * * 12 0 * * * * * * 4871 0 0 T 13 5070 * 3114 1508 * * 4130 3857 5102 6023 * 4951 * 4505 5588 3330 3033 6181 * * 13 16 * 6491 * * * * 4871 0 0 F 14 3849 * 5217 3580 1898 * 5797 * * 4049 * 5390 * * 5388 * * 3617 2661 2427 14 174 3138 * 1348 720 0 * 4885 2379 1000 E 15 5525 * 1485 2352 * * 5871 4440 * * * 2560 * 5246 * 3538 5907 3980 * * 15 12 6973 * 1585 585 * * 5090 1000 0 P 16 4280 * 2925 1301 * 3954 * 4937 3918 6696 * 5075 3223 * 6603 4316 * 6294 * 5163 16 104 4163 6199 2173 362 * * 5090 2062 0 E 17 6147 * 1505 2394 * 2678 * * 5250 * * 4476 * 4821 * 4010 5791 3952 * 4802 17 16 * 6509 * * * 0 5138 0 1000 N 18 4724 * 4424 2089 * 3984 * 4624 3671 5455 4225 2974 5172 4139 * 3015 3870 5786 * * 18 26 * 5822 * * 0 * 5158 0 1573 Q 19 6297 * 4021 2961 6297 1812 5436 * 4512 4380 5228 4396 5832 3360 4442 5117 4444 4695 * 4786 19 21 6092 * 1000 1000 * 0 5157 1000 1000 M 20 3540 4616 * 3652 * * 4786 3016 5214 6114 3932 * 6228 6239 6175 2903 2056 3154 * * 20 86 4110 * 886 1124 0 * 5157 1945 1000 F 21 * * * * 1334 * * * * 2830 5362 * * * * * * * 2554 1900 21 0 * * * * * * 5169 0 0 T 22 4375 * * * 4190 * 5452 4923 * * 4881 * * 4627 4470 2337 2083 5308 * 1929 22 0 * * * * * * 5169 0 0 Y 23 * * * * 4631 * 4083 * 4209 3451 4055 * * * 2916 5562 * * * 885 23 0 * * * * * * 5169 0 0 P 24 4722 * 3063 * 4254 5249 6072 * * * 6131 3125 1112 4639 4761 3636 * * * * 24 0 * * * * * * 5169 0 0 C 25 * 0 * * * * * * * * * * * * * * * * * * 25 0 * * * * * * 5167 0 0 P 26 * * * * * * * * * * * * 1323 * 890 4038 * * * * 26 208 2896 * 945 1057 * * 5167 2049 0 C 27 5105 86 * * * * * 5111 * * * * * * * * * * * * 27 0 * * * * * * 4739 0 0 G 28 * * * 5829 * 187 * * 5105 * * * * 4447 * * 5111 * * * 28 116 3700 * 1000 1000 * * 4739 2177 0 D 29 * * 837 3574 * 2368 * * 5503 * * 3543 * 5050 * 5352 * * * * 29 180 3094 * 1000 1000 * * 4739 2214 0 R 30 3684 5624 6284 3848 4526 2103 5489 3948 3843 2800 5683 6822 * * 3086 4939 4358 5991 * * 30 66 4490 * 1000 1000 * * 4675 1561 0 F 31 * * * * 698 * * 3906 * * * * * * * * * * * 1657 31 0 * * * * * * 4675 0 0 Q 32 4335 * * 2273 4457 * 5463 3574 5590 3245 6209 5296 * 2437 4593 4342 4541 3642 5166 * 32 0 * * * * * * 4676 0 0 I 33 * * * * 3639 * * 1508 * 2503 4942 * * * * * 5166 1594 * * 33 37 5295 * 2000 415 * * 4676 1167 0 Y 34 3618 6311 * 4445 6324 * 6152 * 5471 3448 * 5063 4620 6557 5322 1988 1647 * 5668 5509 34 0 * * * * * * 4643 0 0 L 35 * * * 1277 * * * 3840 2636 2257 6047 5373 4528 6111 * 5139 * 5504 * * 35 0 * * * * * * 4647 0 0 D 36 3632 * 1868 1930 * 5140 * * 4433 * * 5062 5226 4249 5254 2774 6258 6209 * * 36 0 * * * * * * 4646 0 0 D 37 4149 * 1330 2100 * 6097 4379 * * 3611 5699 * * 3848 * * 4248 * * 5226 37 0 * * * * * * 4646 0 0 M 38 4188 5062 * * 5326 * * 3434 * 634 4059 * * * * 5597 * 4076 * 6209 38 87 4096 * 2781 227 * * 4646 1954 0 F 39 6192 * 4562 1175 6245 * 4610 5259 5098 3518 * * * 2936 4073 6100 * 5057 * 3845 39 134 3490 * 4073 88 * * 4641 2304 0 E 40 4376 * 2230 1668 * 5452 4157 * 5143 6321 * 3164 * 4075 4736 4297 * 4474 * * 40 120 3650 * 2822 220 * * 4641 1912 0 G 41 6027 * 4739 4149 * 924 3836 4140 * 5463 * 6127 * * 5166 4405 * 4336 * 3725 41 175 3132 * 3117 177 * * 4695 2311 0 E 42 * * 5821 1184 3861 * * 5476 * * 6123 3821 * 3265 5208 3026 6005 4564 * 4208 42 50 6225 5601 4459 67 * * 4695 1000 0 K 43 * 5454 2154 3678 * 5068 5031 3660 6231 2738 * 4410 5543 5151 * 4689 * 2081 * * 43 0 * * * * 0 * 4662 0 1000 V 44 5593 * * 5463 * * * 2014 * 1967 5389 * * * * 6247 * 1371 * 5075 44 108 5593 4283 1000 1000 * * 4695 1000 0 A 45 1998 * * * 4312 5168 * 3490 * 3161 * * * * * 5793 5298 1336 * 5015 45 55 4753 * 0 * 0 * 4564 1541 1645 V 46 * 3804 * 4187 * 2245 5252 5513 * * * * 2909 2239 4213 3718 4580 3355 * * 46 0 * * * * * * 4635 0 0 C 47 * 0 * * * * * * * * * * * * * * * * * * 47 0 * * * * * * 4635 0 0 P 48 4323 6125 2419 3991 * 4692 * * 6221 6278 4550 * 1852 4339 4426 2937 3745 * * * 48 0 * * * * * * 4635 0 0 S 49 4316 * 3578 * * 1996 * * * * * 5437 * * * 1131 2882 * * * 49 0 * * * * * * 4635 0 0 C 50 * 0 * * * * * * * * * * * * * * * * * * 50 0 * * * * * * 4635 0 0 S 51 * * * * * * * * * * * * * * * 114 3717 * * * 51 0 * * * * * * 4635 0 0 L 52 * * * 3737 * * * 4250 * 348 * * * 4960 * 4197 * * * * 52 0 * * * * * * 4622 0 0 M 53 * * * * 3768 * 4781 3469 3406 6084 3843 * * * 4554 3884 3161 3115 1818 * 53 0 * * * * * * 4622 0 0 I 54 4272 * * * * * * 1053 * 1960 * * * * * * 5542 2413 * * 54 0 * * * * * * 4622 0 0 D 55 * 5947 6167 4273 * * 4029 5297 1623 6143 5001 * * 3766 1730 5314 5022 * * 5036 55 0 * * * * * * 4655 0 0 V 56 5452 * * * * * * 2579 * 3561 * * * * * * 5947 497 * * 56 39 5232 * 1585 585 * * 4655 1000 0 V 57 6068 4814 4895 * 5416 5882 4135 1830 * 2799 5285 4228 * 7652 4048 * 4278 2339 * * 57 0 * * * * * * 4518 0 0 F 58 * 5464 * * 905 * * * * 4140 * * * * * * * * 4662 1526 58 0 * * * * * * 4254 0 0 D 59 3625 * 1360 2723 * * 4288 * 3701 * * 3965 * 5342 * 3611 4842 * * 4496 59 39 5215 * 0 * * * 3928 1000 0 K 60 5512 * 4130 2616 4594 * * 4325 2580 5543 5015 * 2016 * 5722 * * 2681 * 5335 60 0 * * * * * * 3992 0 0 E 61 5543 * 1995 1297 * 2811 * 3741 * 5335 * 3926 * * * * * 6284 * * 61 0 * * * * * * 3992 0 0 D 62 * * 1290 1970 * 4133 * 4557 3946 * 4979 * * 5052 * 3189 * * * * 62 0 * * * * * * 3964 0 0 L 63 2939 * * 3741 3120 * * * * 1067 * * * * * 3279 * 4713 5029 5024 63 26 * 5832 * * * * 3977 0 0 A 64 5212 * 2879 1713 * 4202 * * 3158 * 4705 4491 5431 3270 * 5792 * 3889 * 3825 64 0 * * * * 0 * 3872 0 1000 E 65 3338 * 2583 863 * * * * 3117 * * * 4509 5309 * * * * * * 65 0 * * * * * * 3909 0 0 Y 66 1942 * * 3072 3631 * * * * 3830 * * * 3836 * * * 4512 * 1490 66 86 4112 * 2000 415 * * 3399 1000 0 Y 67 3889 * 3122 1643 * * 2459 * * 3597 * * * 3207 * * * * * 3005 67 0 * * * * * * 3384 0 0 E 68 3252 * 4586 1518 * * * * * * 3461 4222 * 3311 * 3889 2713 4681 * * 68 0 * * * * * * 3384 0 0 E 69 * * 2002 789 * * * * * * * * * 4083 * 3149 * * * * 69 0 * * * * * * 3337 0 0 A 70 680 * 3774 3248 * * * * 2906 * * * * * * 3967 * * * * 70 0 * * * * * * 3222 0 0 G 71 * * * 4140 * 1709 * * * * * 2564 * * 2997 1869 3849 * * * 71 0 * * * * * * 3147 0 0 I 72 * * * * * 3349 * 3655 * 3861 2918 * * 2711 * 3586 2025 2841 * * 72 0 * * * * * * 2989 0 0 H 73 674 * * 2533 * * 3501 * * * * * * * * 3156 * * * * 73 0 * * * * * * 2786 0 0 P 74 * * * * * * * * * 2809 * * 1061 * * * * 1403 * * 74 0 * * * * * * 2412 0 0 P 75 * * 2469 * * * * * 1976 * * 2539 1347 * * * * * * * 75 0 * * * * * * 2339 0 0 E 76 * * * 541 * 2922 * * * * * * * * * * 2469 * * * 76 0 * * * * * * 2339 0 0 P 77 * * * * * * * * 1282 * * * 764 * * * * * * * 77 0 * * * * * * 1830 0 0 I 78 * * * * * * * 1490 * 1098 * * * * * * * 2499 * * 78 0 * * * * * * 1830 0 0 A 79 1490 * * * * * * * * * * * * * * 635 * * * * 79 0 * * * * * * 1830 0 0 A 80 1545 * * * * * * * * * * * * * * * * 605 * * 80 0 * * * * * * 1280 0 0 A 81 0 * * * * * * * * * * * * * * * * * * * 81 0 * * * * * * 1280 0 0 A 82 0 * * * * * * * * * * * * * * * * * * * 82 0 * * 0 * * * 1215 0 0 //