HHsearch 1.5 NAME d1y8xb1 FAM FILE d1y8xb1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1y8xb1.a3m DATE Wed Mar 10 00:30:08 2010 LENG 92 match states, 92 columns in multiple alignment FILT 14 out of 18 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.2 EVD 0.4343 1.2767 SEQ >ss_dssp CCCCEECCTTCBHHHHHHHHHHCTTCCCSSCEEEEEETTEEEEEECSSCHHHHHHHHHHHHSBSGGGTCCTTCEEEEECTTCSSCEEEEEEC >sa_dssp ECDEBECDDEBDBDDBBDCADEBEECEBEBBCACBDCEEEEDDBBCDEDEEDBEEBDDCBDDDAEEBEBDCCCDBCACBEDCEEEDDBDACE >ss_pred CCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHCCHHHCCCCCCCEEEEECCCCCCEEEEEEEC >ss_conf 97314526863289999985038010013841111157753689961735799975553202033311346857897233455307999969 >Consensus xxxxlxxxxxxTLxxllxxLxxxpxxqlksPSixsxxxxxxxxLyxxxpxxLexxtxxNLxkxLkELgvxxGeELxVtDxtxpxxlxlxlxx >d1y8xb1 LPQNIQFSPSAKLQEVLDYLTNSASLQXKSPAITATLEGKNRTLYXQSVTSIEERTRPNLSKTLKELGLVDGQELAVADVTTPQTVLFKLHF >UniRef50_C4QC80(343-432:899) Ubiquitin-activating enzyme E1C, putative n=12 Tax=Fungi/Metazoa group RepID=C4QC80_SCHMA E=2e-32 s/c=1.54 id=35% cov=99% VPRTLRLQTGCTLRDLINVLKTDPEFQMQSPSITTIIDDQHRSLYI-NLPELVDTLKPNLSKTLQELGLINGQIIHVSDITTPRTLSIKLQ- >UniRef50_C6HA01(262-348:349) NEDD8 activating enzyme n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HA01_AJECH E=1e-18 s/c=1.08 id=35% cov=82% LAKPLVVDPESTLEDFILSLGELPEAQLKSPSLRS----EAKMLYQRVPRQLEEHTRPNLKQKLKDL-VADGDEVAVSD------------- >UniRef50_D0NXB4(360-443:526) Ubiquitin activating enzyme, E1 family, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NXB4_PHYIN E=8e-10 s/c=0.77 id=29% cov=91% --KSLQVDPDTmTLQKLIDELCGD-DFRLLKPSISSA----NANLFMQGPPALRAATSPNLVKPLREL-VKDGENLTITDAVFVGDLALSLQ- >UniRef50_B7FTU2(376-447:462) Ubiquitin-activating enzyme E1, protein 3 n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FTU2_PHATR E=1e-09 s/c=0.89 id=34% cov=79% --QKMTISKTTTLNELLQEFRAGP-LRLKSPSLVSSGG---KTLYMQKPPALEKATRSNLDKPVSSL-VESGEELTVTD------------- >UniRef50_Q19360(345-428:430) NEDD8-activating enzyme E1 catalytic subunit n=2 Tax=Caenorhabditis RepID=UBA3_CAEEL E=2e-08 s/c=0.71 id=25% cov=87% -----EVSPSSTLESLIIRLSE--RFHLKHPTLATS----TRKLYciSSFMPQFEQESKENLHTSMKDL-VSDGEEILVSDEALSRALTLRIQ- >UniRef50_D2W0C4(359-434:451) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2W0C4_NAEGR E=7e-07 s/c=0.72 id=30% cov=84% VSKTITCSSDITLDEFRDILRTDKSIQFNNASLRNLTSDQ--TLYLTKPATLRQMTEPNLKKKVKEL-FHTGTELYATD------------- >UniRef50_B0EI95(338-420:422) NEDD8-activating enzyme E1 catalytic subunit, putative n=2 Tax=Entamoeba RepID=B0EI95_ENTDI E=2e-17 s/c=1.08 id=27% cov=85% -----------TLQQLVDEISDDPELQVSNPSI--GLESGQIIFVSRGP--LKEQTEKNLGLELPQLGVKEGEELIINSPAISSPIFLKIHY >UniRef50_C4Y036(354-427:445) Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y036_CLAL4 E=5e-14 s/c=1.07 id=31% cov=82% -----------TVARFLEELATKQDILAKAPSVSSA----RVSLYMRQPAFLETQTRENLSKKLSEL-VQVGEELVVTDPSLPVPIRLVL-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * * * * * * 1420 * * * * * * * 675 * * 1 0 * * * * * * 2308 0 0 P 2 2549 * * * * * * * * * * * 674 * * 2305 * * * * 2 0 * * * * * * 2497 0 0 Q 3 * * * * * * * * 1325 2996 * * * 1633 2706 * * * * * 3 0 * * * * * * 2803 0 0 N 4 * * 3319 * * * * * 3026 * * 3331 1996 * * 3015 1722 * * * 4 0 * * * * * * 2803 0 0 I 5 * * * * * * * 1518 * 1127 2372 * * * * * * * * * 5 0 * * * * * * 2806 0 0 Q 6 * * * 2268 * * * * * * * * * 1903 2997 3682 2164 3340 * * 6 0 * * * * * * 2960 0 0 F 7 * 2912 3371 * 2570 * * 3471 * 2299 * * * * * * * 1696 * * 7 0 * * * * * * 2960 0 0 S 8 * * 2338 * * * * * * * * * 3371 2299 * 1258 3567 * * * 8 0 * * * * * * 2960 0 0 P 9 * * * * * 3682 * * 3471 * * 3371 1068 * * 2912 2997 * * * 9 0 * * * * * * 2960 0 0 S 10 * * 2108 3340 * 2997 * * * * * * * * * 1485 2420 * * * 10 0 * * * * * * 2960 0 0 A 11 2570 2997 * * * * * 2912 * * * * * * * 2254 1459 * * * 11 150 3336 * 0 * * * 2960 1000 0 K 12 * * * * * * * * 3129 * * * * * * 3923 287 * * * 12 0 * * * * * * 3330 0 0 L 13 * * * * * * * * * 115 * * * * * * * 3702 * * 13 0 * * * * * * 3330 0 0 Q 14 3702 * 3367 2216 * * * * 3697 * * 3213 * 1550 3564 * * * * * 14 0 * * * * * * 3330 0 0 E 15 4356 * 1469 1887 * * * * 4143 * * * * 3256 3702 3618 * * * * 15 0 * * * * * * 3330 0 0 V 16 * * * * 2026 * * * * 790 * * * * * * * 2504 * * 16 0 * * * * * * 3330 0 0 L 17 * * * * * * * 1489 * 1178 * * * * 3367 * * 3256 * * 17 0 * * * * * * 3330 0 0 D 18 * * 1425 2185 * * * 3618 4013 3801 * 3564 * 3213 * * * * * * 18 0 * * * * * * 3330 0 0 Y 19 * * * 1751 * * * 3367 4356 2286 * * * * 3618 3801 * 3564 * 3129 19 0 * * * * * * 3330 0 0 L 20 * * * * 4082 * * 3256 * 258 * * * * * * * * * * 20 0 * * * * * * 3330 0 0 T 21 3702 2032 * * * 3801 * * 3564 * * * * * 2680 1988 3129 * * * 21 0 * * * * * * 3330 0 0 N 22 4082 * 1773 2258 * 4143 * * * * * 4098 * 3923 * * 1953 * * * 22 249 3697 3618 0 * * * 3330 1000 0 S 23 * * 1178 * * 3082 * * 3607 3639 * 4050 * * * 2203 * * * * 23 176 * 3124 * * * 0 3206 0 1000 A 24 2890 * * * * 3397 * * 3182 * * * 822 3407 * * * * * * 24 128 * 3562 * * 0 * 3177 0 1909 S 25 3857 * 2818 1587 * * * * 3601 * * * * * 2734 2161 * * * * 25 0 * * * * 0 * 3302 0 1000 L 26 3801 * * * 1467 * * 2525 * 1348 * * * * * * * * * * 26 0 * * * * * * 3330 0 0 Q 27 * * * * * * 3618 * * 3702 * 3923 * 905 2049 * * * * * 27 0 * * * * * * 3330 0 0 X 28 3667 * * * 3320 * * * * 870 2596 * * * * * * 3203 * * 28 0 * * * * * * 3317 0 0 K 29 * * * * * * * * 786 4143 * 3367 * 2629 * 3256 * * * * 29 0 * * * * * * 3330 0 0 S 30 3702 * * * * 3923 3618 * 4143 * * 2310 * * 3697 1183 * * * * 30 0 * * * * * * 3330 0 0 P 31 3367 * * * * * * * * * * * 147 * * * * * * * 31 0 * * * * * * 3330 0 0 A 32 2504 * * * * 3923 * * * * * * * * * 564 3618 * * * 32 0 * * * * * * 3330 0 0 I 33 * * * * * * * 991 * 1430 * * * * * * * 2993 * * 33 160 * 3256 * * * * 3330 0 0 T 34 3480 * * * * * * * * * * * * * 2424 1700 1517 3901 * * 34 0 * * * * * 0 3146 0 1000 A 35 3900 * * * * * * * * * * 3225 * * * 1241 1311 * * * 35 119 * 3655 * * 0 * 3146 0 1000 T 36 1768 * * * * 3189 * 3450 * 3238 * * * * * 2280 3010 3856 * * 36 633 * 1493 * * * 0 3251 0 1000 L 37 * * * * * 3058 * 2850 * 1538 2014 * * * * * 2745 * * * 37 172 3155 * 0 * * 0 2846 1000 2402 E 38 * * 1538 1994 * 1969 * * * * * * * * * 2745 * * * * 38 426 * 1969 * * * 0 2846 0 2402 G 39 * * 1391 * * 1289 * * * * * * * * * 2255 * * * * 39 0 * * * * 2788 226 2515 0 2548 K 40 * * * 2889 * 2423 * * 1515 * * * * 1606 * * * * * * 40 266 * 2572 * * 499 1774 2659 0 2431 N 41 3461 * * * * * 3171 * * * * 2160 * 2943 2465 * 1926 * * * 41 0 * * * * 1703 530 3028 0 1893 R 42 2718 * * * * * * 3036 1793 * * * * * 1537 * * 3428 * * 42 0 * * * * 0 * 3086 0 1621 T 43 * * * * * * * 2460 3618 * 3801 4143 * * * 2631 1392 3923 * * 43 0 * * * * * * 3330 0 0 L 44 * * * * 3256 * * * * 289 * * * * * * * 3697 * * 44 0 * * * * * * 3330 0 0 Y 45 * * * * 2325 * * * * * * * * * * * * 3256 * 523 45 123 3618 * 1000 1000 * * 3330 1000 0 X 46 * * * * * * * 2577 * 2025 1642 * * 3746 * 2382 * * * * 46 133 * 3506 * * * * 3317 0 0 Q 47 * * * * * * * * * * * * * 1292 1628 2636 3222 * * * 47 0 * * * * 0 * 3213 0 1000 S 48 * * * * 3618 2163 * * 1885 * * 3564 * 3702 3697 4098 4161 3801 * * 48 0 * * * * * * 3330 0 0 V 49 * * * * * * * * * 3564 3618 * 604 * * * * 2504 * * 49 160 * 3256 * * * * 3330 0 0 T 50 1979 * * * * * * * 3830 * * * 1074 * 3655 * 3900 4191 * * 50 0 * * * * * 0 3146 0 1000 S 51 2422 * * 3407 3580 * * * * * * * * 2045 * 1805 3225 * * * 51 0 * * * * 0 * 3146 0 1000 I 52 * * * * 3618 * * 2504 * 430 * * * * * * * * * * 52 0 * * * * * * 3330 0 0 E 53 * * * 960 * * * * 3256 * * * * * 1754 * * 3564 * * 53 0 * * * * * * 3330 0 0 E 54 2903 * 3564 1503 * * * * 3213 * * * * 2033 * * 3702 * * * 54 0 * * * * * * 3330 0 0 R 55 2143 * * 2657 * * 3801 * * * 3367 * * 2015 3129 * 3564 * * * 55 0 * * * * * * 3330 0 0 T 56 * * * * * * 3697 * * 2732 * * * * * 3618 533 * * * 56 0 * * * * * * 3330 0 0 R 57 * * * 1537 * * * * 2590 * * * * * 1208 4143 * * * * 57 0 * * * * * * 3330 0 0 P 58 * * * 2660 * * * * 2585 * * * 1237 4356 * 4082 3923 * 3697 * 58 0 * * * * * * 3330 0 0 N 59 * * * * * * * * 3697 * * 116 * * * * * * * * 59 0 * * * * * * 3330 0 0 L 60 * * * * * * * * * 0 * * * * * * * * * * 60 0 * * * * * * 3330 0 0 S 61 * * 2434 * * 3256 3618 * 2567 * * * * * 3923 1859 4013 4143 * * 61 0 * * * * * * 3330 0 0 K 62 * * * * * * * * 556 3256 * * * 2903 * * 3618 * * * 62 0 * * * * * * 3330 0 0 T 63 * * * 3256 * * * * 2026 * * * 2604 * * 1804 2330 * * * 63 0 * * * * * * 3330 0 0 L 64 * * * * * * * * * 391 3618 * * * * * * 2680 * * 64 0 * * * * * * 3330 0 0 K 65 * * * * * 4013 * * 1028 * * * 3256 3564 3029 2880 * * * * 65 0 * * * * * * 3330 0 0 E 66 * * 2706 550 * * * * * * * * * 3256 * 4082 * * * * 66 0 * * * * * * 3330 0 0 L 67 * * * * * * * * * 0 * * * * * * * * * * 67 976 * 1025 * * * * 3330 0 0 G 68 2830 * * * * 486 * * * * * * * * * 2780 * * * * 68 487 1805 * 2000 415 0 * 2573 1353 2546 L 69 * * * * 2778 * * * * 1308 * * * * * * * 1151 * * 69 0 * * * * * * 3330 0 0 V 70 3801 * * 4082 * * 2654 3564 2138 * * * * 3702 3697 2940 * 3129 * * 70 0 * * * * * * 3330 0 0 D 71 * * 1373 2013 * * * * * * * 3564 * * * 3213 3367 3702 * * 71 0 * * * * * * 3330 0 0 G 72 * * * * * 0 * * * * * * * * * * * * * * 72 0 * * * * * * 3330 0 0 Q 73 * * 3801 810 * * * * * * * * * 1939 * * 3367 * * * 73 0 * * * * * * 3330 0 0 E 74 * * * 328 * * * 3564 * * * 4143 * 4013 * * * * * * 74 0 * * * * * * 3330 0 0 L 75 3697 * * * * * * 2590 * 546 * * * * * * * 3801 * * 75 0 * * * * * * 3330 0 0 A 76 2426 * * * * * 3564 3256 * 2762 * * * * * * 1720 3702 * 3367 76 0 * * * * * * 3330 0 0 V 77 3367 * * * * * * 2251 * * * * * * * * * 529 * * 77 0 * * * * * * 3330 0 0 A 78 3129 * * * * * * * * * * 3256 * * * 2072 880 * * * 78 0 * * * * * * 3330 0 0 D 79 * * 160 * * * * * * * * * * * * 3256 * * * * 79 0 * * * * * * 3330 0 0 V 80 2415 * * 3142 * * * 3118 * * * * 1564 * * * * 2024 * * 80 0 * * * * * * 3039 0 0 T 81 1602 * * * * * * * * * * * * * * 3126 1118 3393 * * 81 0 * * * * * * 3039 0 0 T 82 * * * * 3393 * * 2925 * 1306 * * * * * 3438 1854 * * * 82 0 * * * * * * 3039 0 0 P 83 * * * * * * * * * * * * 600 * * 2029 * 3393 * * 83 0 * * * * * * 3039 0 0 Q 84 * * * * * 3393 * * * * * * * 2631 2130 1320 * 3126 * * 84 0 * * * * * * 3039 0 0 T 85 2142 * 3239 * * * * * * * * * 1910 * * * 1317 * * * 85 0 * * * * * * 2957 0 0 V 86 * * * * * * * 1910 * 1140 3264 * * * * * * 2506 * * 86 0 * * * * * * 2957 0 0 L 87 3239 * * * 2806 * * * * 2506 * * * * 2175 2977 2142 * * * 87 0 * * * * * * 2957 0 0 F 88 * * * * 2506 * * 2977 * 521 * * * * * * * * * * 88 0 * * * * * * 2957 0 0 K 89 * * * * * * * * 1165 * * * * 3264 2179 3239 * 3022 * * 89 0 * * * * * * 2957 0 0 L 90 * * * * * * * 1913 * 445 * * * * * * * * * * 90 0 * * * * * * 2957 0 0 H 91 * * * * 3094 * 1934 * 2181 * * * * 1320 * * * * * * 91 0 * * * * * * 2794 0 0 F 92 * * * * 907 * * * * * * * * * * * * * * 1099 92 0 * * 0 * * * 2228 0 0 //