HHsearch 1.5 NAME d1xoda1 FAM FILE d1xoda1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1xoda1.a3m DATE Tue Mar 9 04:06:42 2010 LENG 105 match states, 105 columns in multiple alignment FILT 107 out of 113 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.0 EVD 0.4067 -0.8584 SEQ >ss_dssp CCEEEEEEEEEECSSSSCEEEGGGCCCEEEEEECCCCEEEEEETTTCCEEEEEECCTTCEEEEEETTEEEEEETTEEEEEEESSHHHHHHHHHHHHHHHH HHCCC >sa_dssp ECBEBDABBBDCCEDEECCEDDEEBDCBCABACDEEBCACADBDEDDDDCBDBDBCEECDCDEDDEDCBCADCEDEDCAADBECDDCAEDABCBBDDACE DCCEE >ss_pred CEEEEEEEEEEEECCCCCEEECCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCEEEEECCEEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHH HHHCC >ss_conf 9128999999995799865435777616899637734999999069849999773288589440662679960997999970998899999999999998 86079 >Consensus sxxxxrAxVmxxdxxtxxWvpxgxgxlsxvxxxxxxYxIxgxxlxdxxvixexxlxxxxxYxxxxxxFHxwxxxxxxxGLxFxsexeAxxFxxxvxxale xlxxg >d1xoda1 SYARVRAVVMTRDDSSGGWLQLGGGGLSSVTVSKTEFLVHGERLRDKTVVLECVLRRDLVYNKVTPTFHHWRIGDKKFGLTFQSPADARAFDRGIRRAIE DLSQG >UniRef50_Q5DDI3(12-120:580) SJCHGC05532 protein n=1 Tax=Schistosoma japonicum RepID=Q5DDI3_SCHJA E=1e-21 s/c=0.95 id=29% cov=97% --ASAQAYVLQFNTEDRIWLPSGGTrSLSWVQILQQkgldAYRIVGWRQPDNQVVVNSVLKAGLEY-QIHGQFHEWRDPitSRVYGLHFPEQEEATVFLK TIKLILNRLTN- >UniRef50_Q5TJ65(9-113:380) Protein VASP homolog n=1 Tax=Dictyostelium discoideum RepID=VASP_DICDI E=3e-20 s/c=0.95 id=20% cov=93% -------QVFTYSPQTRNWVPS-SNVPATLQMYfnsgANTYRVIGRAGDDpNNFLINFAVKSEVVYSRASEIFHQFTDQRTHFGINFTSKQDADTFGGGF ENVLRSLKGG >UniRef50_A3QX14(30-129:410) Wiskott-Aldrich syndrome protein (Fragment) n=1 Tax=Suberites domuncula RepID=A3QX14_SUBDO E=8e-07 s/c=0.55 id=24% cov=75% -----------------QWTKFKTGVLCFVKDnNKKSYYIRLIDLSSKATVYEQEVYNQFTYKKDRPFFHSFPGDKFMVGLNFSNESEASLFYQAV---- ------ >UniRef50_Q5KG31(34-127:464) Putative uncharacterized protein n=3 Tax=Basidiomycota RepID=Q5KG31_CRYNE E=4e-10 s/c=0.70 id=27% cov=56% ------------------------------------FRVV-TLSSGRGVIWEHELPIEIEYNQEKPFFHTWQGDEMQFAFVFASEHEAHDFYKKV----- ----- >UniRef50_Q9GSG9(32-115:399) Wiscott-Aldrich syndrome protein n=1 Tax=Dictyostelium discoideum RepID=Q9GSG9_DICDI E=2e-14 s/c=0.95 id=20% cov=78% ----------LYEGRQGRWEFMAVGIVSVVSnrVDKTNYIKVFDLKANYRIIFEQEIYDTFEFQKQRDFFFAFEGDSCVYGLSFADVTEAAEF------- ------- >UniRef50_UPI00005862E9(10-116:356) PREDICTED: similar to homer-2a, partial n=1 Tax=Strongylocentrotus purpuratus RepID=UPI00005862E9 E=2e-18 s/c=0.87 id=17% cov=93% -----RAHVFQIDPNTKKnWLPSSKQAVTVSFFFdstRNSYRIIS--VDGSKAIINSTISSTMTFTKTSQKFGQWADTRanTVYGLGFSTEMELNKFIEE FERvkeaALEITSE- >UniRef50_A7SAP1(13-121:575) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SAP1_NEMVE E=2e-17 s/c=0.83 id=25% cov=96% SFASCRALVFQCDLETERWQPVGEVNeystihllLQQSTQHGRVYKIFGRLESSGSVTVDITLHQGIVYNVVQPTWHEIHVSRHiVFGLMLGKDSDGGKF SVVVQNTLT----- >UniRef50_A8WRD1(55-154:188) Putative uncharacterized protein n=2 Tax=Caenorhabditis briggsae RepID=A8WRD1_CAEBR E=6e-09 s/c=0.62 id=23% cov=82% ------AVVQLLKSDRGSWrVELPHGVVSLVKDYaQRAYFLRIFDILDERVAWDFKLYKAFQAQSFPQCrkllaFEQMENGEdgVVIGLNFFSEYEAAEF -------------- >UniRef50_A9V6R1(56-150:531) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V6R1_MONBE E=0.0001 s/c=0.50 id=26% cov=22% ------------------------------------------------------------------------------GFNFLSLEDSKEMSRRVRQYLN ----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 * * * * * * * * * * * * * * * 294 2438 * * * 1 0 * * * * * * 2774 0 0 Y 2 * * * * 2648 * * 1523 * 3717 * * * * * * * 2106 * 2440 2 0 * * * * * * 2774 0 0 A 3 527 2290 * * * * * * * * * * * * * 4691 * 3994 * * 3 0 * * * * * * 3089 0 0 R 4 * * * * * * * * 4077 * * * * 2587 1273 2158 3543 4302 * * 4 0 * * * * * * 3556 0 0 V 5 1162 3568 * * * * * * * * * * * * * * * 1093 * * 5 0 * * * * * * 3690 0 0 R 6 * * * 4431 * * * * 2862 * 3774 * * 4415 523 * * * * * 6 0 * * * * * * 3885 0 0 A 7 0 * * * * * * * * * * * * * * * * * * * 7 0 * * * * * * 4243 0 0 V 8 5020 * 5123 * * * 2397 * * 3436 * 5068 * 2163 5247 3657 3549 2505 * 4718 8 0 * * * * * * 4553 0 0 V 9 * * * * * * * * * * * * * * * * * 0 * * 9 0 * * * * * * 4553 0 0 M 10 * * * * 1890 * * * * 4511 791 * * 3207 * * * * * * 10 0 * * * * * * 4556 0 0 T 11 5260 6308 * * * * 5063 3534 * 2343 5291 * * 2431 5885 4895 1983 2905 * * 11 0 * * * * * * 4716 0 0 R 12 4458 4232 * * 4957 * * 2626 * 4256 * * * * 1851 * * 6186 * 1459 12 0 * * * * * * 4716 0 0 D 13 * * 666 3603 * 4967 4458 * 4256 * * 2984 * * * 5008 * * * * 13 0 * * * * * * 4716 0 0 D 14 * * 1455 3236 * 4398 * * * 4232 * 6076 2274 4734 * 3139 4957 * * 5416 14 0 * * * * * * 4716 0 0 S 15 4094 * 3896 3550 * 4032 * * 4454 4967 * 2864 * 3687 4398 1792 4029 4733 * * 15 47 * 4967 * * * * 4716 0 0 S 16 5183 * 3811 * * 4775 * * * 6005 * 3614 * 3462 4202 2259 1274 * * * 16 0 * * * * * 0 4643 0 1000 G 17 * * * 3683 * 1734 4683 * 1257 * * * * * 3716 6089 4745 * 4794 * 17 25 5885 * 0 * 0 * 5040 1000 1000 G 18 4818 * * 4819 * 2065 * 5074 1962 * * 5091 * 4297 2602 4017 4775 4042 * * 18 220 2820 * 0 * * * 5175 1562 0 W 19 * * * * * * * * * * * * 4907 * * * * * 49 * 19 58 4668 * 0 * * * 5355 1000 0 L 20 * * * 3540 6229 * * 2380 * 2279 5159 * * 3949 * * 3930 1539 * * 20 0 * * * * * * 5355 0 0 Q 21 4714 * * 4668 4665 4907 6231 * 2846 4329 * * 749 6849 * 4503 * * * * 21 36 6723 6035 1000 1000 * * 5355 1000 0 L 22 2689 5994 * * 5397 4935 5162 * 3051 2303 4342 * 4910 3883 * 2496 6324 3619 * * 22 41 * 5155 * * * 0 5279 0 1000 G 23 3952 4968 3853 5395 5976 1122 5317 * 5369 5134 * * 4637 6292 * 2810 5124 * 4915 * 23 130 3533 * 0 * 894 1114 5217 1862 1617 G 24 5802 5028 6029 4334 * 1311 4668 * 3478 * * * * 6673 4912 3225 2592 4689 * * 24 70 4763 6551 0 * * 0 5279 1567 1000 G 25 4707 * * 5953 * 1083 4557 * 3864 * * 4323 * 3332 * 3376 5341 3439 * * 25 131 3521 * 529 1705 896 1112 5373 2011 1594 G 26 2073 6512 5541 * * 1656 * 3904 * * * 4145 6090 * * 3266 * 2552 * * 26 71 4385 * 3000 193 0 * 5371 1000 1000 L 27 * * 5570 5545 4820 * 5268 3294 * 1188 * * 4508 * * * * 1683 * * 27 0 * * * * * * 5379 0 0 S 28 2861 3131 6056 * * * * * * * * 5251 * 4428 * 962 3126 4939 * * 28 0 * * * * * * 5379 0 0 S 29 5544 4605 * * 3026 4939 4178 4774 3074 3491 5570 4648 * 4150 3266 4766 5157 2537 5358 * 29 0 * * * * * * 5378 0 0 V 30 * * * * * * * 3136 * 4368 * 5382 * * 4804 2499 5570 786 * * 30 69 4431 * 2126 375 * * 5378 1675 0 T 31 4632 * 6181 4939 3403 4030 4629 * 2517 * 6820 5040 * 2958 3889 2965 3227 6139 * 4110 31 88 4080 * 2099 384 * * 5378 1739 0 V 32 * * 1909 * 3315 * 5999 2608 * 4207 5157 * * 4428 * 6181 * 1759 * 5972 32 159 3256 * 1673 543 * * 5378 3005 0 S 33 * 3224 4819 * 4465 * 3415 * 5091 5470 * 4346 3429 5211 3652 5194 4620 * * 1514 33 650 1464 * 1992 418 * * 5315 3974 0 K 34 4229 * 6157 * 6918 4489 6178 * 2074 5050 * 3340 * 3239 1757 5093 4373 6285 * 7067 34 167 3191 * 2468 288 * * 5376 3087 0 T 35 6765 6511 * 6092 * * 4135 6639 3353 * * 1708 6097 5420 1638 5468 3719 4773 * * 35 242 2694 * 2703 241 * * 5309 2850 0 E 36 2720 6242 3360 3506 * 6378 6661 * * 5661 5703 4850 5636 6511 * 1803 3016 3148 * * 36 32 5509 * 2454 291 * * 5309 1651 0 F 37 * * * * 2047 * 6101 * * * * * 5654 * * * * * * 467 37 16 6463 * 3000 193 * * 5336 1000 0 L 38 5667 * * * 2135 * 5036 3874 4234 3425 * * * * 1316 * * 4305 * 4171 38 0 * * * * * * 5350 0 0 V 39 * * * * 3780 * * 889 4900 3023 5437 * * * * * * 2269 * * 39 0 * * * * * * 5350 0 0 H 40 * 6156 * * 4234 * 4444 2914 5036 * * * * * 1729 * 5667 1643 * 3605 40 27 * 5733 * * * * 5350 0 0 G 41 4274 * * * 4872 1038 * 3734 * 2730 * * * * * 2864 * 3968 * * 41 168 * 3187 * * 0 * 5323 0 1000 E 42 * * 4817 2723 3236 * * 5689 5759 * * 5898 * 5494 1904 * 3773 3973 4913 2373 42 82 * 4177 * * * 0 5246 0 1712 R 43 5126 3444 2184 5070 * 6156 * 6800 2753 3234 6087 5676 * * 1751 * 5592 * * * 43 60 * 4617 * * 570 1616 5141 0 2354 L 44 * * 6118 4498 * 5418 * 2547 4942 1506 4065 * * 4118 * 5781 * 2141 * * 44 0 * * * * 950 1052 5314 0 2455 R 45 4452 * 3536 4012 * 5860 6459 4393 2322 4948 6254 4738 5095 2524 4119 2702 6752 * * 5417 45 97 3939 * 296 2432 0 * 5332 1718 1624 D 46 6493 * 1147 5033 * 3061 * * 4177 * * 3323 * * 3433 3090 5514 * * * 46 32 5489 * 0 * * * 5390 1000 0 K 47 3819 6204 * 5006 * 3013 4188 * 2099 * * 2909 * 3027 3624 3571 5474 * * 5123 47 53 4787 * 3008 191 * * 5409 1550 0 T 48 3782 * * 3274 * 3371 4481 5387 2984 6705 5448 5439 * 2460 3429 3187 3668 6204 * * 48 0 * * * * * * 5409 0 0 V 49 3464 * * * 5413 * * 4064 * 3173 5024 6533 4914 5536 5898 * 5196 899 6068 5401 49 0 * * * * * * 5411 0 0 V 50 4979 * * * * * * 1737 * 2494 * * * * 4853 * 3063 1572 * * 50 0 * * * * * * 5322 0 0 L 51 * * * * 5626 * * 1885 * 1993 5174 * * * * * * 4012 1496 6214 51 0 * * * * * * 5322 0 0 E 52 * * 2326 1405 * 4853 * * * * * 1635 * 5434 * 4531 * * * * 52 51 4853 * 2322 322 * * 5322 1000 0 C 53 6045 1705 * * 3824 * 3272 4530 * * * 6053 * 1820 * 2890 5552 * * 7316 53 0 * * * * * * 5322 0 0 V 54 3303 6045 * 1496 7015 6465 * 6784 4979 5188 5072 4549 5487 * 5380 4785 2199 4071 * 6742 54 0 * * * * * * 5322 0 0 L 55 * 5628 * * * * * 1492 * 994 5013 * * * * * * 3456 * * 55 46 4997 * 0 * * * 5175 1000 0 R 56 6487 * * * 5171 6211 4195 6161 3844 5276 * 5968 3591 6792 4121 5099 3587 4265 * 1140 56 0 * * * * * * 5175 0 0 R 57 5683 * 4389 2836 * * 6388 6051 2370 5064 * 3326 2778 4254 3540 4200 * 3994 5063 6463 57 0 * * * * * * 5175 0 0 D 58 4685 * 2979 3642 * 1425 * * 4677 * * 2443 * 3672 6159 5584 4455 * * * 58 0 * * * * * * 5182 0 0 L 59 6733 * * * 1874 * * 3295 * 1894 1989 * 5005 * * * * 4193 6789 * 59 0 * * * * * * 5173 0 0 V 60 * * 3313 2479 * * 5736 4948 2568 * * 5550 5005 3223 6180 4268 3228 2817 * 5253 60 0 * * * * * * 5173 0 0 Y 61 4475 * * * 2524 * * 5029 * * * * * * * * * 4760 * 487 61 27 * 5731 * * * * 5231 0 0 N 62 5586 * * 6708 5046 * 4220 * 4023 * * 1558 * 3588 6770 3417 2345 4727 * 3966 62 0 * * * * 0 * 5191 0 1000 K 63 4959 5976 5837 4268 * * * * 1800 * * * 5531 1767 3946 3221 4575 3926 * * 63 0 * * * * * * 5231 0 0 V 64 2134 * 2460 4943 5248 6070 * 5731 * 4318 * * 3329 5438 * 4096 3011 2809 * * 64 0 * * * * * * 5231 0 0 T 65 4918 * * * * * 5731 * 4280 3952 4863 3874 5248 4360 2000 2409 2211 * * * 65 0 * * * * * * 5231 0 0 P 66 3543 * 6148 5397 * 4243 4457 6498 4436 5837 * 6522 1212 2835 6923 5246 3934 5597 * * 66 0 * * * * * * 5231 0 0 T 67 * 3996 * * 1854 * * 3894 3144 6070 6993 4563 5029 5731 * 6425 2085 * 6366 3235 67 38 5248 * 2322 322 * * 5231 1000 0 F 68 * * * * 246 * * * * 3364 * * 5744 * * * * * 4606 * 68 0 * * * * * * 5231 0 0 H 69 * * * 5248 6148 3277 363 5748 * 5773 * * * * * * * 6649 * 4960 69 73 4342 * 1902 449 * * 5231 1632 0 H 70 4896 6353 * 4062 * * 2841 5837 * 5029 5608 * * 1893 5089 3637 2045 3948 * * 70 0 * * * * * * 5231 0 0 W 71 * * * * 1185 * * 4606 * * 4506 * * * * * * 6357 1112 * 71 0 * * * * * * 5231 0 0 R 72 2652 5089 * 1687 6895 * 4606 * 4695 * * * 5319 3990 2055 4453 5687 5706 * * 72 0 * * * * * * 5231 0 0 I 73 3024 * 1814 * * 2321 * 4145 * 3704 5675 4166 * * * 4749 4262 3753 * 5608 73 0 * * * * * * 5231 0 0 G 74 4178 * 1994 2321 * 3393 5551 6649 * * 5608 4210 4129 5056 5752 2975 4419 6294 * * 74 59 4636 * 474 1837 * * 5231 1904 0 D 75 * * 1888 2730 * 6426 * * 3045 * * 4644 * 4589 1797 4295 5258 * * * 75 218 2835 * 887 1123 * * 5231 2743 0 K 76 5217 1662 * 5706 5709 3755 4209 * 3911 * 4710 * * 2749 3803 6033 3108 5248 * 6966 76 120 3653 * 269 2554 * * 5231 2183 0 K 77 * * * * 3826 * 4985 4702 3153 3801 3353 6892 5820 3548 4263 * 6580 1360 * 6175 77 17 6401 * 618 1521 * * 5231 1493 0 F 78 2553 5230 * * 2319 * 4700 3630 * 5276 5706 6026 * * * * * 2694 4152 2236 78 0 * * * * * * 5231 0 0 G 79 3322 * * * * 152 * * * * * * * * * * * * * * 79 0 * * * * * * 5256 0 0 L 80 * * * * 2482 * * 5005 * 340 * * * * * * * * * * 80 0 * * * * * * 5256 0 0 T 81 4779 5276 * * * 3155 5740 * * 3328 4609 1259 * 5621 * 3734 3145 4643 * * 81 0 * * * * * * 5256 0 0 F 82 * * * * 100 * * * * 4609 * * * * * * * * * 5276 82 0 * * * * * * 5256 0 0 Q 83 1544 * * 3777 5261 3321 * 5621 * 6067 6227 5720 5201 3192 5037 2962 4888 4424 * 6088 83 0 * * * * * * 5256 0 0 S 84 * * 2191 3936 6810 4892 * * 4202 * 5756 4262 * * * 1174 3253 * * * 84 0 * * * * * * 5256 0 0 P 85 5001 * 3495 1182 * * * 5520 3159 4502 * * 3403 4745 5685 6964 3797 5050 * * 85 0 * * * * * * 5256 0 0 A 86 2766 * 3033 1978 5685 5416 5065 6955 5157 * 5471 4536 * 3776 6769 2885 4565 5905 * 5261 86 0 * * * * * * 5256 0 0 D 87 5035 * 1353 937 * 5274 6053 * * * * * * 6096 * * * * * * 87 16 6533 * 2000 415 * * 5256 1000 0 A 88 348 5774 5302 * * 4599 * 6511 * 3391 * * * * * 5446 * * * * 88 0 * * * * * * 5263 0 0 R 89 2748 * 3389 4444 5703 4024 5976 6773 3064 * * 3816 * 4915 2842 3447 2891 6123 * * 89 0 * * * * * * 5222 0 0 A 90 2520 * 5281 3434 * * 3412 5944 2594 4310 5898 7100 * 2947 6715 3187 4006 4442 * * 90 0 * * * * * * 5222 0 0 F 91 * * * * 60 * * * * * 6041 * * * * 5291 * * * * 91 0 * * * * * * 5223 0 0 D 92 2006 * 3101 3764 4845 5625 5382 6343 4174 3183 6937 * * 5313 6432 2968 * 5058 * 3304 92 35 5363 * 0 * * * 5196 1000 0 R 93 3660 6364 * 3431 * 5553 5204 * 1614 * 7082 4061 * 5312 2090 4879 5766 4031 * * 93 0 * * * * * * 5185 0 0 G 94 2220 * * 3758 * 2377 * 4706 2736 * * * * 4618 3617 * 4294 2667 * * 94 0 * * * * * * 5192 0 0 I 95 * * * * 3244 * * 2642 5659 6211 2817 * * * * * * 872 * 6316 95 0 * * * * * * 5192 0 0 R 96 4988 4873 3725 3893 5353 5616 * 6344 3039 3003 4464 * * 2787 2868 * 2637 * * * 96 0 * * * * * * 5112 0 0 R 97 4052 * * 3899 6745 5696 4434 * 3153 4773 * 3590 * 2408 2427 3847 3601 4664 * * 97 32 5522 * 2000 415 * * 5065 1000 0 A 98 725 5314 * * * * * 5085 * 4670 * * * 5422 * 4560 2645 4138 * 5729 98 0 * * * * * * 4838 0 0 I 99 * * * * * * * 2043 5487 913 4814 * * * * * * 2863 * 5013 99 0 * * * * * * 4860 0 0 E 100 * * 2337 1164 * * * * 3747 * * 3168 * 5985 4708 5107 3523 * * * 100 0 * * * * * * 4590 0 0 D 101 5196 * 2302 3147 * 4810 * 3346 5501 * 4700 4665 * * 4491 3266 3021 2939 * 5571 101 0 * * * * * * 4279 0 0 L 102 * * * * * * * 5734 * 294 4485 * * * * * 3811 4326 * * 102 0 * * * * * * 3992 0 0 S 103 4093 * 3538 4336 * * * 3739 3840 3225 * 4870 * 5398 * 1647 2498 * * * 103 0 * * * * * * 3602 0 0 Q 104 * * 2651 2086 * 3052 * * 3914 * * 2315 * 2785 4775 * 4805 * * * 104 0 * * * * * * 3575 0 0 G 105 * * * * * 0 * * * * * * * * * * * * * * 105 0 * * 0 * * * 2781 0 0 //