HHsearch 1.5 NAME d1xo3a_ FAM FILE d1xo3a_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1xo3a_.a3m DATE Mon Mar 8 16:47:49 2010 LENG 101 match states, 101 columns in multiple alignment FILT 106 out of 207 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.0 EVD 0.4440 1.2074 SEQ >ss_dssp CCSSCEEEEEECSSGGGGGTTCCCEEEECCSSSCCCCHHHHHHHHHHHHCCSCGGGSCCTTSCCSSEEEEETTEEHHHHTTTSCCCCTTCEEEEEETTCC C >sa_dssp ECEDCBACACADBCACECAEDEDECDCDBEDEEBDCCADDAACEACEECBEDEDEDAADDCABDEAADACADECDBDEDCCDEBEBCEEACACADADEDE E >ss_pred CCCCEEEEEEECCCHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCEEECCCCEEEEECCCCC C >ss_conf 9885389999721078631985114675136777776999999999753402567531367544228999828122203773207048999999745678 9 >Consensus xxxxMxVkVkfxgglxxlxxxxkxxxvxvxxxxxxxtvxxllxxLxxxxxxxxxxlxxxxxxlrxxvxvlvNgxxixxlxgxxtxLxdgDeVxxxpxixG G >d1xo3a_ SAAPLCVKVEFGGGAELLFDGVKKHQVALPGQEEPWDIRNLLVWIKKNLLKERPELFIQGDSVRPGILVLINDADWELLGELDYQLQDQDSILFISTLHG G >UniRef50_Q8SW42(1-96:96) Ubiquitin-related modifier 1 n=1 Tax=Encephalitozoon cuniculi RepID=URM1_ENCCU E=3e-08 s/c=0.62 id=22% cov=93% -------KFRFNGASNVELNN-REIELTREevEGSSIATVGDALRYLFGKYAETRDSFFDHHGELVHGTICIINKMDWEILEKERSPVKHGDHIVLISTI HGG >UniRef50_B5Y6W1(1-92:92) MoaD family protein n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6W1_COPPD E=1e-07 s/c=0.63 id=21% cov=81% ----MKLEVEFFATLRLKLPKP-TYEVDMPEGS---TVKDLMRELDRITGQPVSEELFRGDEVIPGTVLLLNGKNILHLNGIHTPLEPG----------- - >UniRef50_D1YWA7(1-95:95) Putative uncharacterized protein n=1 Tax=Methanocella paludicola SANAE RepID=D1YWA7_METPS E=3e-13 s/c=0.81 id=24% cov=93% ----MAVCVDIVGYARSLFDRPRYSFEARRG----FTLKGLMEELSKLARPDFRKRIYDaaTGKMNEHIAVFINSREARSLRGLDTELKDGDVVTILPPM AGG >UniRef50_A6DHY5(1-91:91) Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHY5_9BACT E=3e-09 s/c=0.69 id=21% cov=91% ----MNYKIKLWGQLKQKAGKEFIHMESIEE----LNIQDIVLRICEMEPSLSEVLLKSSSSIHPSILIFVNDNQYEH--DKQSPIKKSDPITFMSPIAG G >UniRef50_A0B538(1-92:92) MoaD family protein n=1 Tax=Methanosaeta thermophila PT RepID=A0B538_METTP E=5e-13 s/c=0.82 id=16% cov=67% ----------------------KEMMVEIESGS---NVSDLINHLCEIKPDLRRALYSDTGELRDYFIIMLNRRRLNMPEDLGAALSDNDEV-------- - >UniRef50_A7IA81(1-92:92) MoaD family protein n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7IA81_METB6 E=1e-12 s/c=0.81 id=17% cov=83% ----MTIKVRFFARFRELLGTD-----IIVTSQEGTHLLTVVKKIAEKSQDGYDAIFDAKGDFREFVIVMQNGRRVETATAASTPVTDGDEI-------- - >UniRef50_A4FA92(1-94:94) ThiamineS protein n=5 Tax=Actinomycetales RepID=A4FA92_SACEN E=1e-12 s/c=0.79 id=12% cov=94% ----MRVTVVLPAVLRPSAGGAPQVELDVAAGS---TLGGVLDVLGRRHPALERRLRDESRTLRRYVNFYLDGEECRGLDGAETELAEGAEVRVIPSVAG G >UniRef50_D0RN74(1-88:88) Probable molybdopterin biosynthesis protein MoaD n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN74_9RICK E=1e-06 s/c=0.62 id=23% cov=87% ----MKIKVELFGVCRELSDKD-HIDLELNENSKIKDVRdQMIEIVKTKFPENNNYLEMVEKSA-----FSSKDEIIE----DTYKLKNNDAVSIIPPIG GG >UniRef50_A8YB07(2-91:91) Similar to tr|Q2T8J4|Q2T8J4_BURTA ThiS family domain protein n=1 Tax=Microcystis aeruginosa PCC 7806 RepID=A8YB07_MICAE E=1e-05 s/c=0.56 id=17% cov=24% ----TTLNIAFSGTLLRFVDYQKEVSL------------------------------------------------------------------------- - # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 * * * * * * * * * * * * * * * 0 * * * * 1 0 * * * * * * 2080 0 0 A 2 1592 1560 * 1603 * * * * * * * * * * * * * * * * 2 0 * * * * * * 2080 0 0 A 3 350 * * * * * * * * * * * * * * 2214 * * * * 3 0 * * * * * * 2379 0 0 P 4 * * * 2592 * * * * * * * * 538 * * * 2782 * * * 4 0 * * * * * * 3416 0 0 L 5 * * * * * * * 3836 * 3536 588 * * * * * 3606 3379 * * 5 0 * * * * * * 7174 0 0 C 6 3122 4590 4919 * * * * 4562 1537 5641 * 4261 4700 4313 3893 3727 3818 4353 * * 6 35 5363 * 0 * * * 7174 1000 0 V 7 * * * * * * 5830 1312 * 3184 * * * * * * * 1161 * 5468 7 0 * * * * * * 7842 0 0 K 8 * 5429 * 3581 * * 4326 * 1441 6159 * 4140 * 5460 4308 4814 1913 6184 * 5938 8 0 * * * * * * 7926 0 0 V 9 * * * * 4732 * * 2577 * 3537 * * * * * * * 497 * * 9 0 * * * * * * 7926 0 0 E 10 5594 * 4120 1717 * * * * 1693 4114 * * * 6019 2345 * 6615 5149 * * 10 0 * * * * * * 8135 0 0 F 11 * * * * 887 6001 * 4788 * 1764 * * * * * * * 5555 * 3447 11 91 6024 4460 4248 78 * * 8135 1000 0 G 12 4292 5485 * 5514 2152 4681 5953 * 6315 2326 6614 5554 3993 * 6344 3008 5963 5397 4765 3250 12 0 * * * * 1406 683 7935 0 1913 G 13 1620 5544 * * * 857 * * * 4874 * * * * 4778 5028 * * * * 13 42 * 5135 * * * 0 7956 0 1464 G 14 4233 * 5967 5916 * 1287 6172 * 6202 * * 4639 3824 3645 3969 4003 3693 4365 6608 5383 14 42 * 5124 * * * 0 7941 0 2173 A 15 2624 4764 * * 4051 * * 4829 * 687 * * 5417 * * 5269 * 4836 * * 15 86 5562 4773 0 * 2442 293 7416 1000 2841 E 16 4903 * 3400 2099 * 5332 4911 * 3070 5459 * 5285 * * 1430 * * 6270 * 5113 16 0 * * * * 816 1211 7109 0 3708 L 17 * * 3820 2598 5527 * 3747 * 3040 3191 4664 * 5845 4172 7617 2605 4309 3485 * 6038 17 33 * 5487 * * 1575 590 7243 0 2275 L 18 3331 * 4286 3925 3760 * * 3766 4018 1314 5719 * * * 5511 4618 5386 4639 * 5240 18 0 * * * * 534 1693 7318 0 2106 F 19 2724 * * * 1756 * * 5027 4613 3274 * * 5780 * * 4191 2262 3928 * 5031 19 108 6396 4056 0 * * 0 7938 1000 1000 D 20 2619 * 2427 4636 5685 1741 * 5072 4016 6276 * 3877 4846 5119 * 4146 * * * * 20 44 * 5052 * * 344 2236 7993 0 2967 G 21 4114 * 5127 * 6110 2204 * 6250 2112 * 5478 2951 * 5986 5043 3949 3167 4488 * 5710 21 63 * 4548 * * 1890 454 7572 0 2464 V 22 3743 * 3141 3221 5479 6020 * * 3360 3783 6079 * 3515 3077 5751 3892 3181 4019 * 5786 22 192 * 3004 * * 953 1048 8042 0 3387 K 23 4493 * 6185 3232 5915 6256 5862 6209 1871 * * 5476 4736 6795 1926 3641 3694 6366 * * 23 107 6350 4071 0 * 1111 897 8690 1000 4431 K 24 4857 * 4450 1569 4954 5648 4739 4386 3016 * * 5338 5707 5966 4608 4418 3075 4822 * 5652 24 74 * 4313 * * 2105 382 7874 0 4143 H 25 4499 * 4421 4042 4606 4297 3017 2438 4032 3278 6520 5326 * 4701 4805 5564 3625 4191 * 5864 25 27 5769 * 2000 415 973 1027 8770 1000 4224 Q 26 4377 * 3542 1693 4962 * 4888 6609 3185 3989 5390 * * 3658 4676 5488 3940 4599 * 4758 26 43 * 5091 * * 1598 579 7996 0 3145 V 27 4763 * 5302 3043 5770 3410 * 3304 * 2191 4861 * * * * 6257 6299 1627 * * 27 79 5552 4974 4248 78 1512 623 7919 1000 2996 A 28 3722 5835 4175 2300 6284 3469 * 3466 5049 5308 5649 * * 4029 * 2941 2964 4067 * * 28 34 * 5426 * * 1864 463 7998 0 3102 L 29 5838 * * 6641 5060 * * 2638 4946 1825 6205 * 4362 * 4368 4680 5562 1754 * * 29 68 6545 4810 2000 415 2496 281 8080 1000 3263 P 30 5226 * 3832 2061 * 5365 * 6386 3938 6032 * 4382 1603 * 5746 * 4370 3287 * * 30 84 5851 4679 1000 1000 1364 709 8064 1000 3817 G 31 3346 4730 4637 2911 6042 2694 6129 3988 5075 4132 6584 3772 * 4681 5061 3773 4311 4140 6200 6541 31 172 6565 3297 1585 585 2907 206 7645 1000 3606 Q 32 6584 5965 2313 2653 4412 2727 * 4980 * 5088 * 3827 4071 4107 5551 3369 6286 4821 * * 32 181 * 3084 * * 2364 312 7480 0 4885 E 33 4127 * 6130 3561 6324 3483 * * 4117 4551 6008 * 2941 4455 * 1456 5387 4016 * * 33 188 * 3031 * * 1806 486 7321 0 4898 E 34 4104 * 3567 2009 * 3004 5644 * 3519 * * 4429 * * * 2944 2627 5155 * 6527 34 104 * 3852 * * 3386 145 7585 0 5453 P 35 3290 * 6006 4643 * 2387 6373 3553 5219 2983 6046 4266 2627 * 5921 4960 5743 3264 * * 35 39 6369 6088 2000 415 1482 640 7580 1000 5775 W 36 2153 5890 7088 3761 4534 4958 * 4656 3177 3813 5083 * 6069 4303 3963 4888 3527 3458 6676 * 36 0 * * * * 403 2038 7591 0 4831 D 37 5958 7902 3110 5503 * * 6133 * 4489 6764 * 2842 * * 5840 3717 887 * * * 37 0 * * * * 297 2427 7414 0 2667 I 38 * * * * 4374 6432 * 2830 6211 2010 4911 * 6366 * * * * 1022 * * 38 25 5857 * 0 * * 0 7438 1000 1000 R 39 4131 * 4877 4205 * 2215 6366 5018 3123 4076 * 4633 5492 4164 2459 4196 4910 6424 * 5470 39 24 5913 * 0 * 0 * 7438 1000 1000 N 40 3773 * 1919 2005 5254 4362 5541 * 4884 * 6441 4488 * 3114 5052 5623 4733 6217 * 6640 40 0 * * * * * * 7437 0 0 L 41 3346 6262 * * * * * 4466 5574 797 5915 * * 6745 * * 6525 2252 * * 41 0 * * * * * * 7437 0 0 L 42 * * * * 6481 * * 1644 5287 1219 4470 * * * 5864 * * 2786 7285 * 42 0 * * * * * * 7437 0 0 V 43 3337 6255 2446 2155 5105 * * * 3309 4400 * 5709 * 3980 4022 3508 4411 5411 * * 43 23 * 5979 * * * * 7437 0 0 W 44 3572 * 6625 2721 4323 5323 3804 3853 3704 4350 6272 4076 * 6931 4504 4593 5013 4283 4844 2948 44 0 * * * * * 0 7441 0 1470 I 45 4254 * * * 6857 * * 2817 5439 699 5072 * * * 6664 * * 3256 * 6171 45 90 6563 4332 2807 222 1023 977 7441 1000 1470 K 46 2367 4462 3830 3975 4134 5424 * 4409 4603 4789 5705 4390 * 4467 4470 3227 4866 3300 * 5480 46 0 * * * * 2434 295 7086 0 2627 K 47 5299 6032 3632 2239 * 4646 * 6752 3392 5568 * 4942 5089 3181 2944 3422 3403 6462 * * 47 33 * 5472 * * 703 1375 7077 0 2453 N 48 4816 * 3088 4130 6739 5079 5568 3776 2940 6212 5336 3446 * 3241 2673 * 3552 6921 * 4630 48 59 * 4629 * * 2186 358 7256 0 2509 L 49 4955 6429 * 5095 3108 4379 3207 3742 5350 2802 4635 6909 * * 6972 5321 5666 4024 6438 2073 49 46 7049 5400 0 * 918 1087 7206 1000 3401 L 50 5070 * 5702 4867 6191 2745 5854 3966 4242 4506 6694 5764 1173 6184 4997 5199 * 5369 * 7036 50 0 * * * * 2488 283 7121 0 2824 K 51 3621 * 3313 2637 * 3070 * 5903 3206 * * 4675 3926 4012 3642 3648 4359 4727 * * 51 47 5434 6848 0 * 2456 290 7136 1670 2549 E 52 4872 * 2942 3439 5519 4907 5485 3036 4294 2061 6661 5012 3874 * 5544 6411 4121 6614 6468 4954 52 44 5673 6558 0 * 2266 336 7134 1591 2566 R 53 4208 * * 3500 3253 4863 5204 6380 2284 4730 5478 4849 4227 5200 2330 5013 6683 5752 5241 6179 53 0 * * * * 1338 726 7121 0 2577 P 54 5445 * 3932 3099 6668 6121 5849 6706 2733 4911 5828 4024 2948 4465 2950 3279 4042 6264 * * 54 56 * 4706 * * * 0 7121 0 2096 E 55 3653 * 3623 2127 * 5740 4303 * 3645 3055 * 5008 6411 4638 3182 4731 5313 4724 * 4412 55 61 5794 5427 1374 703 2640 252 7083 1659 3142 L 56 4186 * * 4410 3641 * * 2945 5657 1109 4964 5272 * * 4070 * * 3522 * * 56 85 6939 4354 1000 1000 2420 298 6972 1000 3474 F 57 6248 7195 4983 4872 1536 * * 3720 * 1925 6504 5730 * * 5406 5221 5837 3930 * 3903 57 142 4616 4236 5071 44 3213 165 6895 1837 3911 I 58 4545 * 1967 5145 4484 4639 * 3853 3603 3789 4934 4441 5228 * * 4338 3331 4027 * 4356 58 87 5131 5067 517 1731 1447 659 6913 1604 4962 Q 59 4788 5579 1931 1561 * 6132 5711 * 4078 6614 6770 4601 * 4419 4901 4445 5813 4998 6221 * 59 110 4056 6233 4410 70 2012 411 6889 2784 4705 G 60 4306 * 2102 3402 6144 2618 5651 * 4000 6421 * 4159 4128 4575 4880 3562 3697 * * * 60 45 5570 6656 1242 793 2135 373 6879 1549 4053 D 61 4326 6207 2543 3588 * 1200 * * 5312 6078 6027 3745 * 5277 5115 4207 * * 6971 * 61 43 5099 * 2569 266 2173 362 6886 1637 3791 S 62 3913 * 4702 2165 * 3530 5458 * 2656 * * 4068 * 5477 3951 4025 2775 4321 * * 62 28 * 5680 * * 1867 462 6970 0 3445 V 63 4526 * 6515 6465 4476 5138 * 2574 * 1386 6238 * 4593 * * * 6233 2127 * 6214 63 57 * 4699 * * 2998 193 6992 0 3356 R 64 4066 * * * * 6326 4243 3920 2769 4820 * 4718 * 5454 1182 4622 5631 5721 5720 5236 64 72 6473 4749 0 * 2923 204 6893 1000 3898 P 65 4054 * 3437 3394 6057 5064 4041 * 4570 * * 5246 1433 4883 3675 3535 * * * 6737 65 52 6570 5335 0 * 3265 158 6868 1000 4166 G 66 4973 6122 4763 6727 2743 1462 3572 * 5890 6348 5816 5363 5041 6262 5548 3727 6992 * * 3444 66 17 6385 * 2585 263 1465 649 6851 1000 4494 I 67 6149 * * * 4241 * 6550 1501 * 4395 5983 * * * 6184 * 4339 1412 * 3905 67 0 * * * * 1425 672 6903 0 3746 L 68 3923 * 6571 6822 * 6463 7042 2140 5764 2043 4718 2325 * 7273 3898 4750 * 4599 * 5776 68 0 * * * * 344 2238 6922 0 2843 V 69 5212 5151 * * 3732 * * 1726 * 3636 * * * * * * 5829 1092 * * 69 0 * * * * * 0 7029 0 1000 L 70 3054 7058 * * 2686 * * 5895 * 1233 3371 * * * * 4475 7142 5380 6598 3450 70 0 * * * * 0 * 7029 0 1000 I 71 * * * * 5259 * 5204 1953 6580 3030 * * * 5561 6832 5947 6527 1004 * * 71 0 * * * * * * 7053 0 0 N 72 * * 3549 7091 * 4387 * * 5947 * * 306 * * 6898 6258 * 6259 * * 72 16 * 6497 * * * * 7053 0 0 D 73 * * 1842 4234 * 932 5342 * 5888 * * 5245 * 6281 4557 5622 * * * * 73 35 * 5371 * * * 0 7027 0 1000 A 74 3874 6980 5556 3088 * * 5610 7241 4127 * 4760 3972 * 3699 1884 4926 3658 2953 * 6514 74 60 * 4622 * * * 0 6975 0 1809 D 75 5453 * 1261 5309 * * 4288 4309 6037 6283 5923 2426 6299 4270 4035 5060 6992 6193 * 5295 75 0 * * * * * 0 6931 0 3119 W 76 3970 6464 * * 6983 * * 1382 * 5390 * * * * * 4176 4473 2135 2707 5136 76 40 * 5195 * * 1521 618 6931 0 3119 E 77 5433 * 3781 1721 5810 5761 6599 * 3785 6513 6510 3748 5312 4041 2327 4296 4699 6562 * * 77 71 * 4389 * * 2254 339 6934 0 3034 L 78 4629 * 6243 5078 2896 4315 2894 3964 * 2463 6292 6274 6309 6366 4597 4085 4634 3561 4978 4480 78 135 * 3483 * * 1011 989 6879 0 3717 L 79 4736 * 5045 4165 6357 6748 6432 5778 4962 755 6345 * 4638 * 4603 4381 6540 4375 * * 79 12 6897 * 0 * 1878 458 6794 1000 4140 G 80 5272 * 3020 2312 * 2303 * * 4341 4743 * 3278 5176 3085 6207 6284 4784 5743 5053 * 80 21 * 6144 * * 2010 412 6820 0 3685 E 81 4265 * 4382 3403 * 974 5724 5874 2788 5468 6483 4969 * * 5288 * 5365 * * * 81 47 * 4977 * * 983 1017 6876 0 3297 L 82 4318 * 4619 2738 4590 6082 * 5370 5012 1513 4048 6316 4360 * 6196 5764 6422 4042 5484 4355 82 11 * 6993 * * 461 1871 6965 0 3372 D 83 4061 * 1453 2955 * 6445 6523 * 4046 * * 3615 5273 4376 4596 3281 3984 * * * 83 0 * * * * * 0 7060 0 1911 Y 84 3365 4378 6410 6213 * * 5566 6990 6455 4674 * * 6371 5119 4800 4262 958 5812 * 3496 84 0 * * * * 743 1313 7060 0 1911 Q 85 4399 * 7126 2659 * * * 6253 3190 4257 * 6773 2021 3906 4018 6675 4139 2785 5912 * 85 0 * * * * 0 * 7053 0 1000 L 86 6587 * * * 5315 * * 2859 * 653 * * * * * * * 2389 * * 86 0 * * * * * * 7051 0 0 Q 87 4260 * * 2789 * 4941 4956 * 1682 * * 3430 6151 3907 3768 2993 4207 * * * 87 0 * * * * * * 7051 0 0 D 88 3801 * 1344 2662 * 5026 4749 * 5325 * * 3155 3018 6946 * 5134 6489 * * * 88 0 * * * * * * 7051 0 0 Q 89 5553 * 4255 6604 * 680 6256 * 6747 * * 2908 * 4471 5268 4108 7113 * * * 89 0 * * * * * * 7051 0 0 D 90 5102 6503 199 * * * * * 6183 * * * * 4727 * 4744 * * * * 90 0 * * * * * * 7083 0 0 S 91 5129 5191 6868 1166 * * 5131 * 3871 4915 * 5442 6290 * 3984 6715 3622 2650 * 6525 91 0 * * * * * * 7083 0 0 I 92 6620 * * * * * * 1600 * 3080 5995 * * * * * * 927 * * 92 0 * * * * * * 6936 0 0 L 93 2273 6357 4525 6736 6166 6227 6273 4571 6496 3247 * * * 6457 6342 2430 2399 3085 * 6308 93 0 * * * * * * 6271 0 0 F 94 * * * * 1477 * * 1519 * 2400 * * * * * * * 3290 * * 94 0 * * * * * * 6269 0 0 I 95 * * * * 2312 * * 1790 * 1917 4108 * * * * * 4780 2735 * * 95 0 * * * * * * 6274 0 0 S 96 5561 * * * * * * * * * 6460 * 697 4432 * 1796 5924 * * * 96 0 * * * * * * 6274 0 0 T 97 2415 * * 6459 * * * 4665 * 4778 5947 * 1343 * * 3497 2497 6273 6009 5587 97 0 * * * * * * 6274 0 0 L 98 5013 * * * * * * 1332 * 2132 4322 5693 * * * * * 1866 * * 98 0 * * * * * * 6274 0 0 H 99 1357 * 6517 * * 4358 1755 * * * * * * * * 2466 3783 * * * 99 0 * * * * * * 6274 0 0 G 100 * * * * * 0 * * * * * * * * * * * * * * 100 0 * * * * * * 6274 0 0 G 101 * * * * * 0 * * * * * * * * * * * * * * 101 0 * * 0 * * * 6274 0 0 //