HHsearch 1.5 NAME d1wmhb_ FAM FILE d1wmhb_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1wmhb_.a3m DATE Mon Mar 8 16:27:17 2010 LENG 82 match states, 82 columns in multiple alignment FILT 11 out of 15 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.5 EVD 0.3991 -0.3921 SEQ >ss_dssp CEEEEEEEETTEEEEEEEEGGGCCCHHHHHHHHHHHTTCTTCCCEEEEECTTSCEEECCSHHHHHHHTTSSSSCEEEEEECC >sa_dssp EEBDACADBEEDECDCECDCEECEBCEDBBEDACDCBECEECECEBBBDCEEEEEDEAEDDEBBEEACEBEEEBBDBCADDE >ss_pred CCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCHHHHHHHHCCCCCEEEEEEEC >ss_conf 9124320026522241048437012798999999975118964899984178717343273257887632698256788609 >Consensus sxveVKSKfxAEFRRFsxxrxxxxxfxxFxxllxxxHxlxxxxfxixYxdxhgDLLPInNDdNfxkAxxSxxplLRixiQrr >d1wmhb_ SIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLGYTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKR >UniRef50_Q9BYG4(17-98:376) Partitioning defective 6 homolog gamma n=84 Tax=Metazoa RepID=PAR6G_HUMAN E=2e-17 s/c=1.10 id=52% cov=101% SAVEVKSKFGAEFRRFSLDRHKPGKFEDFYKLVVHTHHISNSDVTIGYADVHGDLLPINNDDNFCKAVSSANPLLRVFIQKR >UniRef50_Q9NAN2(13-96:309) Partitioning defective protein 6 n=4 Tax=Bilateria RepID=PAR6_CAEEL E=6e-14 s/c=0.94 id=46% cov=101% STLQVKSKFDSEWRRFSIPMHSASGvsYDGFRSLVEKLHHLESVQFTLCYNSTGGDLLPITNDDNLRKSFESARPLLRLLIQRR >UniRef50_C4QAC0(6-87:351) Partition defective complex protein (Cell polarity protein) (Synapse formation protein) n=1 Tax=Schistosoma mansoni RepID=C4QAC0_SCHMA E=6e-26 s/c=1.44 id=37% cov=100% -LVEVKSKFGAEFRRFSFMAEDTLQYNAFYSLLERIHMLFNIPFVIQYVEPkNADLLPISNNKNFELAVNSSKPLLRILLQRK >UniRef50_Q52PI6(18-100:377) PAR-6 n=2 Tax=Phlebobranchia RepID=Q52PI6_9ASCI E=1e-21 s/c=1.25 id=37% cov=100% AFLQVKSKYQAEFRRFPLD-LNRDNFEDFFHRLQSLHHLANFDFVITYTDPvHSDLLPINNDENFTKAKQScVNSLMRVYVHRK >UniRef50_B3DJX7(15-96:397) Zgc:194441 protein n=2 Tax=Danio rerio RepID=B3DJX7_DANRE E=1e-32 s/c=1.71 id=45% cov=101% SMLEVKSKYGAEFRRFSVDRYEPGRYKDFYRLIVRLHQLWHTDVFIGYADVHGELLPINNDDNFCKAVSSTQSLLRIFIQLR >UniRef50_UPI00015561FB(154-227:294) PREDICTED: similar to partitioning defective 6 gamma, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015561FB E=4e-30 s/c=1.78 id=47% cov=91% --------FGAEFRRFSLDRYKPGKFADFYQLVLHTHRISSTDVLIGYADVHGDLLPINNDDNFFKAVSSANPLLRVFIQRQ >UniRef50_A9ZRZ3(29-209:382) Partitioning defective 6 n=3 Tax=Strongylocentrotidae RepID=A9ZRZ3_HEMPU E=6e-57 s/c=0.47 id=46% cov=98% ---EIKSKLDAEFRRFTINPNKVGTYEDFYAFLERMHHLGDVPFLVGYTDPQGDLLPINNDDNYLKALTSSKPPLKIVLQKR >UniRef50_O97111(13-198:351) Par-6 n=15 Tax=Arthropoda RepID=O97111_DROME E=3e-71 s/c=0.60 id=42% cov=101% NLIEVKSKFDAEFRRWSFKRNEAEQsFDKFASLIEQLHKLTNIQFLILYIDPRdNDLLPINNDDNFGRALKTARPLLRVIVQRK >UniRef50_Q6TNS1(17-98:434) Novel protein (Id:ibd2873) n=2 Tax=Clupeocephala RepID=Q6TNS1_DANRE E=8e-32 s/c=1.58 id=43% cov=101% NAVEVKSKYGAEFRRFSVDRIKPGKFEEFYKLIMTIHRIANMEVMIGYADIHGDLLPINNDENFSKAVSTAHPLLRIFIQRQ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 2766 * * * * * * * * * * 1910 * * * 769 * * * * 1 0 * * * * * * 2465 0 0 I 2 2420 * * * 2959 * * 2429 * 1994 3289 * * * * * 2780 * * * 2 0 * * * * * * 2600 0 0 V 3 * * * * * * * 3005 * 1409 * * * * * * * 1003 * * 3 0 * * * * * * 2600 0 0 E 4 * * * 405 * * * * * * * * * 2032 * * * * * * 4 0 * * * * * * 2497 0 0 V 5 * * * * * * * 3107 * * * * * * * * * 178 * * 5 0 * * * * * * 2497 0 0 K 6 * * * * * * * * 0 * * * * * * * * * * * 6 0 * * * * * * 2497 0 0 S 7 * * * * * * * * * * * * * * * 0 * * * * 7 0 * * * * * * 2497 0 0 K 8 * * * * * * * * 0 * * * * * * * * * * * 8 0 * * * * * * 2497 0 0 F 9 * * * * 726 * * * * 3124 * * * * * * * * * 1833 9 0 * * * * * * 2466 0 0 D 10 * * 1062 * * 1305 * * * * * * * 3102 * * * * * * 10 0 * * * * * * 2466 0 0 A 11 178 * * * * * * * * * * * * * * 3106 * * * * 11 0 * * * * * * 2466 0 0 E 12 * * * 0 * * * * * * * * * * * * * * * * 12 0 * * * * * * 2466 0 0 F 13 * * * * 178 * * * * * * * * * * * * * 3106 * 13 0 * * * * * * 2466 0 0 R 14 * * * * * * * * * * * * * * 0 * * * * * 14 0 * * * * * * 2466 0 0 R 15 * * * * * * * * * * * * * * 0 * * * * * 15 0 * * * * * * 2466 0 0 F 16 * * * * 152 * * * * * * * * * * * * * 3326 * 16 0 * * * * * * 2466 0 0 A 17 2753 * * * * * * * * * * * 3102 * * 689 3124 * * * 17 0 * * * * * * 2466 0 0 L 18 * * * * 2229 * * 2115 * 1352 * * * * * * * 2607 * * 18 0 * * * * * * 2466 0 0 P 19 * * 1295 * * * * * 3326 * 3139 3124 1919 * * * * * * * 19 179 * 3102 * * * * 2466 0 0 R 20 2979 * * * * * * * * * 2943 * 2966 * 701 * * * * * 20 0 * * * * 0 * 2340 0 1000 A 21 3380 * * 3139 * * 2474 3622 * 3102 * 2221 * * * * 4258 * * 2776 21 0 * * * * * * 2466 0 0 S 22 * * 3139 2453 * * * * 1631 * * 3102 * * * 1919 * * * * 22 0 * * * * * * 2466 0 0 V 23 2212 * * * * * * * * * * * 1781 * 3102 * 3139 1926 * * 23 0 * * * * * * 2466 0 0 S 24 * * 3102 3326 * 1301 * * * 3139 * * * * 4258 2237 * * * * 24 0 * * * * * * 2466 0 0 G 25 * * * * * 1919 * * 2264 * * 3102 * 2229 3592 * 3124 * * * 25 351 2212 * 613 1530 * * 2466 1437 0 F 26 * * * * 804 * * * * * * * * * * * * * * 1227 26 0 * * * * * * 2466 0 0 Q 27 3986 * 2212 1410 * * * * 3592 * * 3139 * 2753 * * * * * * 27 0 * * * * * * 2466 0 0 E 28 3139 * 1181 2123 * 3106 * * 3326 * * * * * * * * * * * 28 0 * * * * * * 2466 0 0 F 29 * * * * 0 * * * * * * * * * * * * * * * 29 0 * * * * * * 2466 0 0 S 30 3326 * * * 3102 * * * * * * * * * 3106 2753 * * * 945 30 0 * * * * * * 2466 0 0 R 31 3124 * * * * * 3102 * 2785 * * * * 3986 2112 1602 * * * * 31 0 * * * * * * 2466 0 0 L 32 * * * * 3124 * * * * 379 * * * * 3102 * * * * * 32 0 * * * * * * 2466 0 0 L 33 * * * * * * * 1922 * 1020 * * * * * * * 2041 * * 33 0 * * * * * * 2466 0 0 R 34 * 4258 * 1171 * * * * * 3986 3622 * * 3102 3380 * * 2768 * * 34 0 * * * * * * 2466 0 0 A 35 3380 * * * * * 2978 * 3106 * * * * 3326 1684 3102 3622 4258 * * 35 0 * * * * * * 2466 0 0 V 36 * * * * * * * 2360 * 1268 3124 * * * * * 2978 2753 * * 36 0 * * * * * * 2466 0 0 H 37 * * * * * * 0 * * * * * * * * * * * * * 37 0 * * * * * * 2466 0 0 Q 38 * * * * * * 1282 * 3326 * 3139 * * 2112 2793 * * * * * 38 0 * * * * * * 2466 0 0 I 39 * * * * * * * 1488 * 636 * * * * * * * * * * 39 0 * * * * * * 2466 0 0 P 40 2339 * * 3106 3139 3124 * * * * * * 2753 * * 2978 3326 * 3592 * 40 0 * * * * * * 2466 0 0 G 41 * * 3124 * * 2753 3592 * * * * 1075 * * * 2480 * * * * 41 0 * * * * * * 2466 0 0 L 42 * * * * 3102 * * 2229 * 2753 3622 * * * * 3969 2776 2115 * * 42 0 * * * * * * 2466 0 0 D 43 * * 1075 3622 * * * * * * * * 2131 2212 * * * * * * 43 0 * * * * * * 2466 0 0 V 44 * * * * 835 * * * * * * * * * * * * 1186 * * 44 0 * * * * * * 2466 0 0 L 45 * * * * 3592 * * * * 1231 3622 * * * * * 2474 2120 * * 45 0 * * * * * * 2466 0 0 L 46 * * * * * * * 688 * 1919 * * * * * * * 3124 * * 46 0 * * * * * * 2466 0 0 G 47 * 3106 * * * 852 * * * 3326 * * * 3139 * * 3102 * * * 47 0 * * * * * * 2466 0 0 Y 48 * * * * * * * * * * * * * * * * * * * 0 48 0 * * * * * * 2466 0 0 T 49 1781 * * * * * * 3326 * * * 3106 * * * * 1397 3139 * * 49 0 * * * * * * 2466 0 0 D 50 * * 376 3139 * * * * * * * * * * * 3106 * * * * 50 0 * * * * * * 2466 0 0 A 51 2753 * * * * * * 3622 * * * * 1170 * * * 3106 2253 * * 51 377 2120 * 0 * * * 2466 1482 0 H 52 * * * * * 3106 847 * * * * 3139 * 3124 3326 * * * * * 52 152 3326 * 0 * * * 2466 1000 0 G 53 2592 * * * * 694 * * * * * 3326 * * * 3102 * * * * 53 0 * * * * * * 2466 0 0 D 54 * * 210 2887 * * * * * * * * * * * * * * * * 54 0 * * * * * * 2466 0 0 L 55 * * * * * * * * * 0 * * * * * * * * * * 55 0 * * * * * * 2452 0 0 L 56 * * * * * * * * * 0 * * * * * * * * * * 56 0 * * * * * * 2452 0 0 P 57 * * * * * * * * * * * * 0 * * * * * * * 57 0 * * * * * * 2452 0 0 L 58 * * * * * * * 174 * 3138 * * * * * * * * * * 58 0 * * * * * * 2452 0 0 T 59 * * * * * * * * * * * 625 * * * 3085 2096 * * * 59 0 * * * * * * 2452 0 0 N 60 * * * * * * * * * * * 0 * * * * * * * * 60 0 * * * * * * 2452 0 0 D 61 * * 181 * * * * * * * * 3085 * * * * * * * * 61 0 * * * * * * 2452 0 0 D 62 * * 562 2286 * * * * 3085 * * * * * * * * * * * 62 0 * * * * * * 2452 0 0 S 63 * * * * * * * * * * * 174 * * * 3138 * * * * 63 0 * * * * * * 2452 0 0 L 64 * * * * 625 * * * * 2096 * * * * * * * * * 3085 64 0 * * * * * * 2452 0 0 H 65 * 2675 * 3085 3919 3283 3138 * * 3085 * * * * 3056 3557 3058 * * * 65 0 * * * * * * 2452 0 0 R 66 * * * * * * * * 587 3085 * * * * 2209 * * * * * 66 0 * * * * * * 2452 0 0 A 67 185 * * * * * * * * * * * * * * 3056 * * * * 67 0 * * * * * * 2452 0 0 L 68 * * * * 3056 * * * 3058 1581 * * * * * * * 1233 * * 68 0 * * * * * * 2452 0 0 A 69 3138 * * 3056 * * * * 3283 * * 3085 * 3058 * 1700 3085 * * * 69 0 * * * * * * 2452 0 0 S 70 * * * * * * * * * * * * * * * 300 2413 * * * 70 184 3058 * 0 * * * 2452 1000 0 G 71 1180 * * * * 3138 * * * * * * * * * 2085 3483 3058 * * 71 0 * * * * * * 2452 0 0 P 72 * * * * * * 3557 * 2085 * * 1981 3138 3483 2165 * * * * * 72 0 * * * * * * 2452 0 0 P 73 * * * * * * * * * * * * 339 * * 2255 * * * * 73 0 * * * * * * 2452 0 0 P 74 * * * * * * * * * 380 * * 2111 * * * * * * * 74 0 * * * * * * 2452 0 0 L 75 * * * * * * * * * 184 3058 * * * * * * * * * 75 0 * * * * * * 2452 0 0 R 76 * * * * * * * * 3085 * * * * * 181 * * * * * 76 0 * * * * * * 2452 0 0 L 77 * * * * * * * 1286 * 2096 * * * * * * * 1490 * * 77 0 * * * * * * 2452 0 0 L 78 * * * * 1700 * * 3283 * 1508 * * * * * * * 3085 * 3058 78 0 * * * * * * 2452 0 0 V 79 * * * * * * * 1224 * 2085 * * * * * * * 1572 * * 79 0 * * * * * * 2452 0 0 Q 80 * * * * * * 3058 * * * * * * 184 * * * * * * 80 0 * * * * * * 2452 0 0 K 81 * * * * * * * * 1744 3483 * * * * 708 * * * * * 81 0 * * * * * * 2452 0 0 R 82 * * * * * * * * 1554 * * * * 2727 976 * * * * * 82 0 * * 0 * * * 2452 0 0 //