HHsearch 1.5 NAME d1wm3a_ FAM FILE d1wm3a_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1wm3a_.a3m DATE Tue Mar 9 00:20:05 2010 LENG 72 match states, 72 columns in multiple alignment FILT 103 out of 590 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.9 EVD 0.4286 0.6871 SEQ >ss_dssp CEEEEEECTTSCEEEEEECTTSCTHHHHHHHHHHHTCCTTTCEEEETTEECCTTCCTTTTTCCTTEEEEEEC >sa_dssp EBDACACCEEECECDCEBEDECDACEBBECBBEEDEDCDEDBDBDBEEDDBEEECBACEBEBEDDCDADBDE >ss_pred CEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHEEEEECCEEECCCCCHHHCCCCCCCEEEEEC >ss_conf 879999749999999996499848999999997619996777999547163566677874999987999989 >Consensus xIxixvxxxxgxxxxxxvxxxxtixxLkxxxxxxxxixxxxxxlxfxGxxLxxxxTxxxxxixdgdxIxvxx >d1wm3a_ HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQ >UniRef50_Q54CF8(2831-2891:3071) Chromo domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q54CF8_DICDI E=0.0008 s/c=0.74 id=21% cov=86% ---------NGTTVPYFLSTTTSFESLFHRFCEKVKIDRKSTIFSYEGKRLLNEQTPEGIYMKPHASITV-- >UniRef50_C9SMI4(450-520:523) Putative uncharacterized protein n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SMI4_VERA1 E=4e-10 s/c=0.93 id=21% cov=99% -IKIILKARTGEPVKTTARPASTVAELIEVYRKMRDVPAGTeIQLHFDGEPLDGETTVEDADIEDMDSLEVH- >UniRef50_UPI000186EDC3(2-72:1267) hypothetical protein Phum_PHUM537450 n=1 Tax=Pediculus humanus corporis RepID=UPI000186EDC3 E=1e-13 s/c=1.09 id=18% cov=100% -LELTVKTLDSQNHSFTVPDETTILQLKESILEKMGVPVEIQRLIFHGKVLQDEKKLSDYGDVNGKVIHLVQ >UniRef50_UPI0000E495BD(237-307:316) PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E495BD E=6e-06 s/c=0.73 id=17% cov=75% QIQVFVRQINGRTLTINTRANATVDDLQREIKTRTSIDLSQQRLTFSSQNLTD------------------- >UniRef50_A8BNL2(3-70:76) Ubiquitin n=2 Tax=Giardia intestinalis RepID=A8BNL2_GIALA E=2e-05 s/c=0.74 id=17% cov=92% ---LKVQLTTGYILTLDVAPTETILDIKNKVYDQEGIHPAQQKMLYLAQQLQNTTTVEEANLKAGITI---- >UniRef50_Q54GV5(64-135:289) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54GV5_DICDI E=9e-05 s/c=0.67 id=9% cov=75% -ITFFIRHLSGRTYEMKSNFKCLISEIKNLFFKNFenSIKPSEMVLNYNGHKLENN------------------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * H 1 * * * * * * 1649 * * * * * * 826 * * * * * 3093 1 0 * * * * * * 4375 0 0 I 2 * * * * * * * 530 * 3731 5432 * * * * * * 2258 * * 2 0 * * * * * * 7639 0 0 N 3 * 6208 4276 3610 6097 * * 4819 2374 6342 * 3049 5136 3792 4473 4271 2003 6252 * 5903 3 0 * * * * * * 7877 0 0 L 4 * * * * 4581 * * 1329 * 1605 6041 * * * * * * 2210 * * 4 0 * * * * * * 7963 0 0 K 5 * * * 6555 3993 4356 4853 4574 1765 6355 6418 4793 * 5621 3178 3319 2887 5111 6450 4624 5 20 6191 * 0 * * * 7963 1000 0 V 6 * * * * 5286 * * 2618 * 1860 6394 * * * * * 5929 978 * * 6 18 6318 * 1000 1000 * * 7967 1000 0 A 7 6673 * * 6321 * * 5242 5122 1709 5239 5389 5889 * 3044 1827 5839 4457 3587 * * 7 33 6652 6283 3807 107 * * 7967 1000 0 G 8 5532 5791 2919 5937 6207 2822 6104 6670 5142 3768 5395 4755 4994 6747 * 2374 2359 * 5299 5963 8 15 * 6638 * * 0 * 7977 0 1000 Q 9 4685 * 4990 4144 * 5348 * 4414 3214 2688 4172 3864 3680 3825 4139 3104 4596 4276 * * 9 33 6608 6365 2322 322 * 0 7988 1000 1000 D 10 4590 * 1788 3347 * 4752 5607 * 4576 6080 6579 2410 * 4841 6237 3367 3152 * * * 10 95 4227 6609 313 2358 0 * 8234 3247 1763 G 11 * 5874 4826 4637 6307 1079 * 6211 3667 6394 * 3207 * 5216 4249 3363 6479 * * 5569 11 69 4417 * 1545 606 0 * 8237 2715 1000 S 12 5202 * 3672 3434 * 4173 * * 2295 5624 * 5106 * 3626 2449 3012 3832 5496 * 6293 12 21 * 6101 * * * * 8236 0 0 V 13 5743 * 3621 3372 5253 6524 4833 3278 4779 4790 6791 5626 4500 3865 3964 3881 2621 3347 * 5595 13 34 6460 6427 0 * 0 * 8314 1000 1000 V 14 4688 * 6062 6608 3375 * 3881 1959 6411 2745 3856 * * 5675 * 6538 4781 2569 * 4345 14 13 6833 * 0 * 0 * 8272 1000 1000 Q 15 4423 6505 5169 2782 5771 6309 3842 6254 3894 * 6474 6389 4863 5077 2979 3169 2610 4075 * 4650 15 29 5663 * 0 * * * 8288 1737 0 F 16 * 4575 * * 1936 * * 2598 5477 2458 4138 * * * 4450 * 5058 2595 * 5112 16 24 5944 * 1000 1000 * * 8195 1139 0 K 17 3785 * 4346 3028 6110 * 4313 * 2822 4254 5507 3563 5269 4143 3769 3580 2727 * * * 17 14 6689 * 0 * * * 8199 1000 0 I 18 4237 * * * * 6416 * 1663 * 3097 3548 * 6367 * * 6354 5715 1420 * * 18 0 * * * * * * 8218 0 0 K 19 3577 6731 4285 3917 5586 3466 6539 * 3279 6662 * 3228 3575 4353 2843 3185 4939 * * 4929 19 17 6416 * 1585 585 * * 8218 1000 0 R 20 4333 * 5214 3666 5605 5320 * * 2601 3233 4290 5209 2277 5120 3557 5003 4094 5009 * 6803 20 0 * * * * * * 8218 0 0 H 21 4188 * 2943 4323 5433 * 4644 * 3454 5275 6350 3100 6481 5482 4981 3110 1915 6662 * * 21 0 * * * * * * 8218 0 0 T 22 3768 6319 2561 3154 5539 6267 * 4113 6752 5686 5873 5435 * 5722 * 2760 2137 4696 5059 6858 22 0 * * * * * * 8230 0 0 P 23 6864 * 5639 5052 6176 * * * 2709 4394 6204 * 2729 4952 5406 3111 1355 * * * 23 0 * * * * * * 8260 0 0 L 24 4523 * * * 2623 * * 2249 * 2114 3999 * * * * * * 1785 * * 24 0 * * * * * * 8174 0 0 S 25 3827 * 3820 2831 6793 4304 6044 * 2992 3643 6380 6403 * 3658 2666 2570 6848 * * * 25 0 * * * * * * 8174 0 0 K 26 5263 * 2914 3080 * 5413 6328 4256 2112 * 6042 4014 6276 3741 3972 4108 3830 4419 * * 26 0 * * * * * * 8174 0 0 L 27 6276 * * * 4818 6412 * 3169 * 723 5283 6197 * * * * * 2447 * * 27 0 * * * * * * 8176 0 0 M 28 5387 * * 6390 3252 * 5921 3269 1169 3732 3147 * * 5741 5454 * 6355 4986 * 5579 28 0 * * * * * * 8101 0 0 K 29 3835 6746 3182 2711 * 4423 6073 6781 3160 5569 6682 3200 * 3675 2952 5116 3992 4783 * * 29 0 * * * * * * 8101 0 0 A 30 2404 4811 6483 4517 4446 * 4565 4404 2930 3420 4553 6850 * 3708 3872 4077 5220 3854 * 6746 30 35 6400 6390 2585 263 * * 8101 1000 0 Y 31 6541 4280 * * 2397 6377 * 2136 * 3104 5670 * * * * * 6402 3094 6386 2111 31 20 6172 * 2322 322 * 0 8090 1000 1000 C 32 2248 2775 6759 3984 4742 6575 6761 5461 5325 4208 * * * 3384 4291 2243 6172 6828 * 4996 32 23 6012 * 1585 585 0 * 8090 1000 1000 E 33 3963 * 2860 2118 * 6675 7276 * 2519 4344 5813 4023 * 3760 4097 4288 4211 6483 * * 33 0 * * * * * * 8101 0 0 R 34 5141 * 5550 2434 6553 * 4092 4950 2623 3671 3947 4117 * 3672 2919 5858 * 4635 * 4962 34 0 * * * * * * 8101 0 0 Q 35 4217 6414 5158 3484 3730 * 3958 5659 3340 3291 4992 4674 6048 4444 4369 5748 2674 3787 * 5119 35 46 4991 * 1096 910 * * 8101 2527 0 G 36 5601 6400 4635 4081 * 1452 4447 * 2997 * * 2678 6949 5655 5330 3160 * * * 6554 36 55 4733 * 0 * * * 8101 2379 0 L 37 4699 4533 6048 4899 6262 * * 1870 4952 2467 4523 * * 6838 * 4484 6022 2088 6582 6373 37 42 5796 6555 622 1513 * * 8101 1669 0 S 38 3746 * 2354 3032 * 5333 4373 5688 5395 6459 * 4972 1773 5184 * 3494 5743 5602 * * 38 0 * * * * * 0 8169 0 1000 M 39 3488 * 6709 4239 4995 6703 * 4116 3935 3217 7073 * 1981 5589 3883 4013 5350 2896 * 7227 39 27 5743 * 948 1054 0 * 8169 1612 1000 R 40 3701 * 3015 2934 6414 3624 4961 * 3551 * * 2653 * 5410 4029 2465 5234 7197 * * 40 30 5608 * 1540 608 * * 8101 1765 0 Q 41 4144 * 4123 3592 4985 6578 4576 5655 3331 4892 * 3588 * 2526 2918 3414 3936 6766 6838 * 41 25 5838 * 0 * * * 8101 1727 0 I 42 5683 4950 5826 * 4215 6310 * 2397 * 2733 3903 * * 1892 * * 5283 2863 * 5357 42 14 6746 * 1585 585 * * 8101 1000 0 R 43 5658 4088 * 5322 * * 6427 3730 2200 4680 5848 6247 * 4060 1711 4889 4050 4440 * 5906 43 18 6355 * 2322 322 * * 8101 1000 0 F 44 * * * * 1755 * * 3938 * 879 5329 * * * * * * 4196 6031 * 44 11 7010 * 0 * * * 8101 1000 0 R 45 6294 * * 5429 3437 * 7018 1869 4721 2849 5362 6371 * 5657 6105 3896 3387 3413 5441 3984 45 14 6675 * 0 * * * 8101 1000 0 F 46 6384 5053 6675 * 1172 * 3974 6662 * 4011 * * * * 6262 6369 5906 * 5497 1713 46 0 * * * * * * 8101 0 0 D 47 4564 6553 2085 3487 * 3989 5635 * 3096 6365 * 2565 * 4329 3184 4152 6282 * * 6355 47 13 * 6778 * * * * 8101 0 0 G 48 6399 * 3037 6865 * 409 * * * * * 4917 * 5636 5724 5925 5940 * * * 48 0 * * * * 0 * 8175 0 1000 Q 49 6459 * 3736 3033 6344 * 6371 5166 2013 5119 6055 5139 * 3127 2564 5848 3922 4635 * 6375 49 0 * * * * * * 8101 0 0 P 50 6344 6943 6427 3174 4207 6582 * 3335 4115 3372 6683 5911 3214 3643 3009 5706 3543 3536 6701 * 50 0 * * * * * * 8101 0 0 I 51 * * * * 5327 * * 2554 * 684 4132 * * * 5802 * * 3591 * 5367 51 53 5199 6816 950 1051 * * 8101 2236 0 N 52 4561 6574 2636 2846 6740 5354 5870 * 2762 6065 5894 3939 5264 3894 3959 3543 3531 6958 * 6159 52 0 * * * * 0 * 8104 0 1000 E 53 * * 1674 4053 * 3228 6963 5747 4702 3395 * 2948 3034 5478 * 4703 5483 5349 * * 53 0 * * * * * * 8101 0 0 T 54 5060 6592 3078 3313 6020 3554 5653 * 4121 * * 2053 * 4742 6019 3502 3125 6241 6138 4692 54 28 6621 6832 2000 415 * * 8061 1000 0 D 55 4733 5599 2558 3195 * 4927 5987 * 3079 3707 4323 4141 * 3025 4593 4170 3787 6509 * 6742 55 26 5787 * 0 * 0 * 7975 1748 1000 T 56 * 6751 6977 * * 6117 * * 4626 4473 * * 6628 6640 6010 2565 653 5441 * 5713 56 0 * * * * * * 8024 0 0 P 57 4163 6272 * * 5202 * * 3709 * 1567 5430 * 1746 * * 6347 * 2676 * * 57 0 * * * * * * 7809 0 0 A 58 2652 6272 3953 2195 5736 3996 5623 6575 3476 6386 * 5827 * 2991 6529 2746 6809 * * 5739 58 0 * * * * * * 7809 0 0 Q 59 4881 * 1554 2884 4751 6004 * 6132 6242 * 5623 * * 3493 * 2478 3549 * * 4802 59 0 * * * * * * 7809 0 0 L 60 3808 4577 * 5320 5000 * 5437 3984 * 1949 4415 5731 * 5625 6212 * 4566 5122 * 1668 60 12 6968 * 0 * * * 7809 1000 0 E 61 6415 * 2557 3593 * 1514 5540 * 4312 5776 * 2131 * * 4699 6272 * * * 6004 61 0 * * * * * * 7809 0 0 M 62 * 5909 6539 * 5585 * * 1502 * 1517 3121 * * * * * * 3005 6670 * 62 12 * 6870 * * * * 7809 0 0 E 63 4543 * 4738 2019 * 4661 4719 * 2599 6162 * 4098 6435 2799 3996 3740 4579 5414 * * 63 0 * * * * 0 * 7813 0 1000 D 64 6207 * 1296 3029 6237 4581 5360 6297 6356 6501 * 3193 4935 5521 5090 3658 4945 5726 5839 * 64 0 * * * * * * 7804 0 0 E 65 5546 5971 3620 3370 6511 1034 5243 * 4872 5542 5017 3308 * 5252 5669 5293 * * * * 65 0 * * * * * * 7797 0 0 D 66 4420 * 855 3839 5519 6492 5082 6095 6493 * * 5418 * 5234 6324 3331 4629 6301 * 5195 66 0 * * * * * * 7806 0 0 T 67 4670 5296 * 3870 3349 6738 * 2283 4550 6433 5856 * * 5327 5642 4497 1987 2829 * * 67 0 * * * * * * 7810 0 0 I 68 * * * * * * * 714 * 2333 * * * * * * * 2382 * * 68 0 * * * * * * 7814 0 0 D 69 * * 1680 2026 * * 4276 3890 * * * 4873 * 3211 * 4789 3693 3884 * * 69 0 * * * * * * 7486 0 0 V 70 3214 3658 * * 4341 * * 4516 * 4547 * * * * * * * 562 * * 70 0 * * * * * * 7201 0 0 F 71 * * * * 1269 * 2322 * * * 3608 * * * * * * 4212 4316 2330 71 0 * * * * * * 5781 0 0 Q 72 * * * 1491 * * * * 1600 * * * * 1670 * * * * * * 72 0 * * 0 * * * 3505 0 0 //