HHsearch 1.5 NAME d1wiia_ FAM FILE d1wiia_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1wiia_.a3m DATE Mon Mar 8 17:20:08 2010 LENG 85 match states, 85 columns in multiple alignment FILT 60 out of 64 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.6 EVD 0.4095 -0.4778 SEQ >ss_dssp CCCCCCCCCCCCCCCCCCCCSSCCCCTTTCCSSCEEEEEETTTTEEEEEESSSCCEEEEECCSSCCTTHHHHHHHHHHHHCCCCC >sa_dssp EEEEEEEEEEEEEEEEEDEEDDDBDACDCEEEDBADBECDEEEDCACACBEECEDECEBEBDEECDBCDACDDBDECDEEDEEEE >ss_pred CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCEEEEEEEEECEEEEEECCCCCHHHHHHHHHHHHHHHCCCCC >ss_conf 9876456678875446778886141688988775999998138859999202021689506775504557877765553045789 >Consensus GkRkKxxxxxxpxkkxxxklptxFxCPfCnhxxsVxvkidkkxxxgxlxCxvCgxxxxxxixxLxepiDVYsxWiDxcexxxxxx >d1wiia_ GSSGSSGRKPPPKKKMTGTLETQFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEFQTPITYLSEPVDVYSDWIDACESGPSSG >UniRef50_Q4QCV8(2-74:220) Excreted/secreted protein 72 n=2 Tax=Leishmania RepID=Q4QCV8_LEIMA E=8e-15 s/c=1.12 id=31% cov=85% GGKRKKSNNGPVKKESKYKIPTRFDCPLCDAKASIVVRMFRATSDATVQCRVCGAGGTKRWNVlrLEKPVDVF-------------- >UniRef50_A8B6A4(62-133:288) Putative uncharacterized protein n=2 Tax=Giardia intestinalis RepID=A8B6A4_GIALA E=3e-13 s/c=1.06 id=26% cov=85% --KKKRTRAAPPKKAGRSKF---FPCPVCNTIESVGSERISKEGVFVLTCKMCKERYTYKYGLLDTPNEAHRSWGD--------- >UniRef50_A3DN80(2-82:105) Putative uncharacterized protein n=1 Tax=Staphylothermus marinus F1 RepID=A3DN80_STAMF E=2e-12 s/c=0.91 id=28% cov=92% GRRRKKYRKPI---RKVRKIPKIFQCPNCG-SKTLTIRLEKLNipgyKKAIITCGTCGLHAEMQVPELYGPLDVYAKFIDAFEEG---- >UniRef50_Q6BGB4(2-74:200) Chromosome undetermined scaffold_1, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=Q6BGB4_PARTE E=2e-10 s/c=0.92 id=31% cov=87% GGRRKSNR--MPKKEKVQSIKTIFDCALCGYKNCVIVKIKKIIKIAELNCDKCQVSFHTKIKGLDEAIDVYHKWL---------- >UniRef50_Q4MZH2(2-81:340) Putative uncharacterized protein n=1 Tax=Theileria parva RepID=Q4MZH2_THEPA E=1e-18 s/c=1.17 id=32% cov=92% GRRKTKKIKPSKSSlalKNRNKPLREFHCHFCQNDRSVWIKISKTTGTASLQCRICGTQSTFSITSLDEPIDVYSYWIDS-------- >UniRef50_A8MDA5(27-103:148) Putative uncharacterized protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MDA5_CALMQ E=2e-13 s/c=1.00 id=27% cov=92% GKRRKTRKLLVRPKK---RLPTVFQCPYCGSV-AVNVSVIKKENKVKVTCGVCGLEAVFDKVNGLLPVDYYNKFVDKYFAG---- >UniRef50_B9RST9(3-61:62) Transcription elongation factor, putative n=1 Tax=Ricinus communis RepID=B9RST9_RICCO E=5e-09 s/c=1.06 id=34% cov=68% ---RRRSKRAVKKPMRVQKLDTVFTCPFCNHANSVACDIDRKIWVGEASCSICKASFMTK------------------------- >UniRef50_Q8STS7(2-77:80) Transcription elongation factor 1 homolog n=1 Tax=Encephalitozoon cuniculi RepID=ELOF1_ENCCU E=6e-12 s/c=0.95 id=34% cov=91% GRRRVKRRINIPKRQSR--LEKRFNCPVCNHENVVQCTVKKTLMKGFANCSVCEASFACDANKLTTGIDVYSAWVDEC------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 3802 0 0 S 2 * * * * * 2890 * * 808 * * * * * 2082 4113 * * * * 2 0 * * * * * * 3802 0 0 S 3 * * * * * * * * 2855 * * * * * 282 4669 * * * * 3 52 * 4824 * * * * 4107 0 0 G 4 * * * * * 2264 * * 1227 * * * * * 1455 * * * * * 4 0 * * * * 0 * 4400 0 1000 S 5 * * * * * * * * 445 * * * * * 3728 3492 3963 4752 * * 5 0 * * * * * * 4437 0 0 S 6 5794 * * * * * * * 2012 * * * * * 1404 1793 3886 * * * 6 0 * * * * * * 4434 0 0 G 7 4422 * * * * 4312 * * 1949 * * 4737 * * 2982 2051 2313 * * 4741 7 0 * * * * * * 4434 0 0 R 8 5500 * * * * * * 3137 1845 * * 4653 * * 1358 2952 5223 * * * 8 111 * 3761 * * * * 4434 0 0 K 9 3928 * * * * * * 3409 1373 3855 * 4557 4351 * 3358 2797 4263 * * * 9 24 * 5931 * * * 0 4342 0 1881 P 10 2433 * * * * 3878 * * 3306 3849 5935 4675 1516 4885 * * 3615 4167 * * 10 83 * 4167 * * 341 2248 4359 0 1896 P 11 3660 * * * * 4084 * 3707 4905 * 3815 * 1338 5195 * 4041 4104 2845 * * 11 60 * 4612 * * 943 1059 4475 0 1601 P 12 6155 * * * * 4180 * 3439 2865 * * * 909 * 3181 * * 4094 * * 12 0 * * * * * 0 4509 0 1476 K 13 4358 * * * * * * * 1358 4603 * * 1979 4039 3815 4221 4954 4368 * * 13 0 * * * * * 0 4531 0 1476 K 14 5977 * * * * * * * 796 4724 * * 5603 3326 2683 4360 4460 * * * 14 72 4360 * 1585 585 0 * 4653 1145 1476 K 15 4139 * * 3431 * * * * 1188 * 5642 * 4881 5289 1591 * * * * * 15 116 * 3692 * * * * 4801 0 0 M 16 3751 * * 6314 * 4051 * 5182 2104 6302 4848 3241 3511 * 4019 2637 * 2952 * * 16 127 * 3574 * * 2218 349 4776 0 1849 T 17 4563 * * * 4930 * * 3216 2003 * 5501 * 4957 6032 2049 4846 3813 2730 * * 17 67 * 4468 * * 576 1603 4787 0 2274 G 18 4102 * 4143 3076 * 4675 * * 4821 * 4768 4471 2651 2928 3165 4014 * 4551 * 3271 18 0 * * * * 416 1996 4711 0 2235 T 19 * * * * 4937 * * * 939 * * * 2441 4990 3296 4817 3949 5157 * * 19 0 * * * * 0 * 4817 0 1000 L 20 * * * * 4362 * * 2169 * 843 4756 * 3487 * * 5151 * 5883 * * 20 72 * 4362 * * * * 4896 0 0 E 21 4371 * 1977 4889 * * * * 5642 4760 * 5111 1086 * 4134 4326 * * * * 21 41 * 5172 * * * 0 4764 0 1000 T 22 4239 * * * * * * 5385 1833 6573 * 5077 * 5205 4260 3739 1289 4687 * * 22 0 * * * * * 0 4721 0 1681 Q 23 5774 5397 * 3498 * * 4975 3455 4724 4005 6054 5319 * 4126 3266 5859 2783 1990 * 5026 23 0 * * * * 960 1041 4721 0 1681 F 24 * * * * 0 * * * * * * * * * * * * * * * 24 0 * * * * * 0 4871 0 1000 T 25 5803 * 1952 3706 * * 4044 * 4409 5781 * 3141 4299 2851 6596 3565 3017 * * * 25 0 * * * * 0 * 4871 0 1000 C 26 * 0 * * * * * * * * * * * * * * * * * * 26 0 * * * * * * 4911 0 0 P 27 4416 * * 5282 * * 4803 5437 * 2666 * * 529 * * * * * * 5812 27 0 * * * * * * 4911 0 0 F 28 * * * * 1153 * 4315 * 5152 3549 * 3215 * * 4242 5261 * 3358 * 3291 28 0 * * * * * * 4911 0 0 C 29 * 0 * * * * * * * * * * * * * * * * * * 29 0 * * * * * * 4911 0 0 N 30 4453 * 3770 5437 * 1865 6302 * * * * 1160 * 3649 * 4523 * * * * 30 116 4753 4641 0 * * * 4911 1000 0 H 31 3150 5339 * * * * 1120 * 4179 * * 3094 * * * 3158 4295 * 5166 4667 31 116 * 3694 * * 0 * 4890 0 1461 E 32 3836 * 3398 1489 * 5246 * 3440 2765 * * * 5191 4851 * 3445 5868 4567 * * 32 149 * 3350 * * 617 1522 4828 0 1890 K 33 5353 * 3476 4165 * 5985 * * 1455 4505 * 2420 * 3624 4861 4943 4617 5070 * * 33 41 5150 * 0 * 961 1040 4700 1000 2037 S 34 2603 3307 * * * * * 4684 * * * * * * * 955 3126 3941 * * 34 0 * * * * 1000 1000 4806 0 1551 C 35 * 3911 * * * * * 2237 * 4412 5483 * * * * * * 617 * * 35 0 * * * * 0 * 4842 0 1000 D 36 3899 * 3295 3009 * 3672 4354 3287 * 4698 * 4139 * 5582 * 3263 2582 4215 4803 * 36 0 * * * * * * 4911 0 0 V 37 3607 2415 * * 5343 * * 2034 * * * * * * * 4343 * 1278 * * 37 0 * * * * * * 4911 0 0 K 38 * * 6276 3175 * * * 3966 1446 6599 * 4505 * * 2624 3210 3357 5437 * * 38 0 * * * * * * 4911 0 0 M 39 * * * * 4502 * * 1918 * 1973 2357 * * 4775 3723 * * 2952 * * 39 0 * * * * * * 4841 0 0 D 40 * * 1246 4225 5582 * 5853 3411 2773 5467 * 3502 * * * 3486 5236 5667 * * 40 0 * * * * * * 4841 0 0 R 41 * * 5353 * 5774 * 4494 * 941 4789 5337 5588 * 5978 2206 4286 * 5236 * * 41 0 * * * * * * 4841 0 0 A 42 3798 5233 4945 6282 * * 6430 5707 1064 4316 * 5211 * 5208 5774 2684 3859 * * * 42 36 5349 * 1000 1000 * * 4841 1000 0 R 43 3668 5211 3879 2558 * 6129 6230 4997 3296 3962 5793 3240 * 5467 5500 3765 2618 * * 5233 43 69 4429 * 1791 492 * * 4841 1473 0 N 44 5697 * * 6161 * 1282 * * 2310 4409 4859 3207 * * 3515 3961 * * 6359 * 44 85 4124 * 1849 469 * * 4841 1501 0 T 45 * * 5582 * 6193 5062 * 2448 2085 3570 * * * 5953 4631 5667 2840 2207 * * 45 0 * * * * * * 4841 0 0 G 46 1336 * * * 4286 1142 * * * * * * * * * 5233 * 4548 * 5062 46 0 * * * * * * 4841 0 0 V 47 * * 4413 3864 5588 * 3833 2949 2646 3950 5087 4321 * 5073 4347 3229 3538 3744 * 6177 47 0 * * * * * * 4841 0 0 I 48 3113 * * * * * * 1911 * 1213 * * * * * * * 2418 * * 48 0 * * * * * * 4841 0 0 S 49 4491 * 4655 3653 * * 3394 * 3713 6161 5236 3394 * 4030 3377 3074 2757 4219 * 4278 49 17 * 6430 * * * * 4841 0 0 C 50 * 0 * * * * * * * * * * * * * * * * * * 50 0 * * * * * 0 4911 0 1000 T 51 4756 * 5663 5177 * 2583 * 5275 2453 5804 * 6059 * 5900 1912 3240 3847 5428 * 5249 51 0 * * * * * 0 4911 0 1000 V 52 * * * 4756 * * * 2195 3528 5715 4341 3269 * 5740 4253 4410 4727 1600 * * 52 0 * * * * * 0 4911 0 1000 C 53 * 0 * * * * * * * * * * * * * * * * * * 53 54 4776 * 1000 1000 * 0 4911 1210 1000 L 54 5715 * 6302 3465 * 892 5433 * 2853 4767 * 4586 * 4465 * 4221 * * * * 54 29 5655 * 0 * * 0 4911 1000 1000 E 55 2683 * * 2442 * * * 5757 * 2088 * * * 2320 * 5144 4474 3220 * 5275 55 0 * * * * * 0 4911 0 1000 E 56 4684 * 5269 3205 6175 3912 5101 5144 2672 * * 5285 * 4874 3085 2173 5386 3982 * 4459 56 0 * * * * * 0 4911 0 1000 F 57 3961 * 5218 * 1636 5488 3912 * 5578 * * * * * 4579 4802 4267 4537 * 1714 57 34 5428 * 0 * * 0 4911 1000 1000 Q 58 5580 * 4217 2088 5655 * 4342 * 4208 * 6251 5428 * 1999 * 3470 2746 4610 * * 58 0 * * * * * 0 4911 0 1000 T 59 5428 3376 5655 4756 2872 * * 5249 5488 5259 2868 5804 * * * 4017 1835 * * 3114 59 75 4304 * 0 * * 0 4911 1585 1000 P 60 4777 * 3819 3000 * 4278 5385 5460 2385 * * 3921 2493 4703 3390 5848 3998 * 5596 * 60 39 5240 * 0 * * 0 4911 1000 1000 I 61 4548 5733 * 5044 4836 * * 1138 5428 5246 5174 * * * * * 6171 1973 5556 4273 61 69 4419 * 2299 328 * 0 4838 1503 1000 T 62 * * * * * 3420 4168 * 4382 5640 * 1706 3060 * 4123 3871 2269 5428 * * 62 0 * * * * 0 * 4838 0 1000 Y 63 3363 * 6739 4196 6418 4640 3735 * 4051 3333 * 4272 2799 5056 6119 2563 * 4848 * 3203 63 42 5129 * 1746 511 * * 4840 1546 0 L 64 * * * * 5937 3632 * 3309 * 417 * * * * * * * 4236 * * 64 0 * * * * * * 4843 0 0 S 65 * * 1784 3585 5571 * 4493 4756 * 4529 * * * * * 1965 3379 * 5052 3347 65 30 * 5626 * * * * 4843 0 0 E 66 3356 * 2836 1376 * 4359 * * 4142 5175 4990 * * 3141 * 5305 3758 * * * 66 0 * * * * 0 * 4837 0 1000 P 67 2136 5832 * 4236 5190 5546 5052 * 5188 * * * 906 * 4756 5339 * * * * 67 0 * * * * * * 4843 0 0 V 68 3473 * * * * * * 1243 * 5609 * 4277 * * * * * 1267 * * 68 0 * * * * * * 4843 0 0 D 69 * * 220 4277 * * * * * * * 4236 * * * * * 4756 * * 69 0 * * * * * * 4843 0 0 V 70 3241 * * * * * * 2508 * * * * * * * * * 633 * 3767 70 0 * * * * * * 4843 0 0 Y 71 * * * * 3104 * 4277 * * * * * * * * * * * * 265 71 0 * * * * * * 4843 0 0 S 72 3726 6061 5362 * * 3137 3373 * * * * 2543 * * 4263 1251 5007 * * * 72 0 * * * * * * 4622 0 0 D 73 4199 * 1955 2431 * * 6311 5596 2019 * * 4583 * 5992 3850 4259 * 5463 * 5612 73 0 * * * * * * 4630 0 0 W 74 * * * * 1871 * * * * * * * * * * * * * 461 * 74 38 * 5282 * * * * 4630 0 0 I 75 * * * * 4214 4233 * 1347 * 2644 5426 * * * * * * 1660 * * 75 0 * * * * * 0 4599 0 1000 D 76 * * 0 * * * * * * * * * * * * * * * * * 76 0 * * * * * 0 4509 0 1000 A 77 1142 * 4378 2685 * * * * 2553 4645 * * * 5840 * 3565 * 5008 * * 77 0 * * * * 0 * 4076 0 1000 C 78 3921 540 * * 2737 * * * * * * * * * * * * 4833 * 4027 78 0 * * * * * * 3805 0 0 E 79 * * 2407 697 3814 * * * * * * * * * 4298 * * * * 3781 79 0 * * * * * * 3694 0 0 S 80 817 * * 2135 * * * * * * * * * * * 2590 4689 * * * 80 0 * * * * * * 3364 0 0 G 81 1514 * * * * 810 * * * * * * * * * * * 3652 * * 81 546 1666 * 2000 415 * * 3365 1000 0 P 82 965 * * * * * * * * * * * 1036 * * * * * * * 82 0 * * * * * * 2158 0 0 S 83 * * * * * * * * 1972 * * 1958 * * * 1036 * * * * 83 0 * * * * * * 2158 0 0 S 84 * * * 1972 * * * * * * * * 1958 * * 1036 * * * * 84 0 * * * * * * 2158 0 0 G 85 * * * * * 0 * * * * * * * * * * * * * * 85 0 * * 0 * * * 1871 0 0 //