HHsearch 1.5 NAME d1vyxa_ FAM FILE d1vyxa_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1vyxa_.a3m DATE Mon Mar 8 21:04:22 2010 LENG 60 match states, 60 columns in multiple alignment FILT 106 out of 3034 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.2 EVD 0.5210 1.7983 SEQ >ss_dssp CTTCSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCCC >sa_dssp EEEEEECDACCDEEDBCEDEBEABDBEDEBDDABCECACDCBEEDECECAEEDEDEAECE >ss_pred CCCCCCCEEEEECCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCEECCC >ss_conf 987678781577505544410010358983997699999887310456473238776049 >Consensus xdxeexxxCxICxxxxxxxxxxpcxcxxcxxxxHxxClxxWxxxxxxxxCPxCrxxxxxk >d1vyxa_ MEDEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNTR >UniRef50_UPI0000DB7DD0(113-179:392) PREDICTED: similar to ring finger protein 153 n=4 Tax=Neoptera RepID=UPI0000DB7DD0 E=3e-11 s/c=1.04 id=25% cov=93% --EDDKRYCWVCFATDEDDatasWVKPCHCRGTTKWVHQGCIQRWVDEKQKGRagahvaCPQCNTEY--- >UniRef50_B8LN79(84-144:410) Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LN79_PICSI E=7e-07 s/c=0.90 id=17% cov=100% -DTDATSSCSICMEPWTSGGNHRISCLPCGHLFGRPCIIKWIRQRGGNigKCPQCNKMCKVK >UniRef50_A0CRM7(145-211:346) Chromosome undetermined scaffold_25, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0CRM7_PARTE E=3e-05 s/c=0.74 id=23% cov=95% ----EEKQCKFCNEqDWSVHLIRPCLCKGGQQYAHQKCVQNEIEANymdfnrrqfiKRLQCDFCRFQYVIK >UniRef50_O02333(267-322:349) Protein T24D1.3, confirmed by transcript evidence n=1 Tax=Caenorhabditis elegans RepID=O02333_CAEEL E=0.0001 s/c=0.85 id=21% cov=93% -QDGSHGECTMCFEVP----VSPLGCNNCLQIIgCEECVDIWYRSSSKPSCPLCRRKWARK >UniRef50_Q757J7(31-98:147) AER016Cp n=1 Tax=Eremothecium gossypii RepID=Q757J7_ASHGO E=0.0002 s/c=0.69 id=22% cov=100% -DEDEEDVCGICRGSYNgtcpncklPGETCPLIVGSCHHNFHVHCIYQWLNTStSKGLCPMCRQAFSLR >UniRef50_B3S4V7(18-75:463) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S4V7_TRIAD E=3e-05 s/c=0.86 id=25% cov=95% -ENEDDPTCPICLCPFENKSYLekCFRILNEIDTFCFYCILQW--SEVVQTCPLCKSEFTT- >UniRef50_D1H4Z1(1-62:1022) Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=rosids RepID=D1H4Z1_VITVI E=0.0008 s/c=0.72 id=25% cov=100% MSDEGEKTCPLCAEEMDltDQQLKPCKCGYEICVWCWHHIMNMAEKDETEgRCPACRVPYNK- >UniRef50_UPI00015B56EF(1-59:919) PREDICTED: similar to GA18517-PA n=1 Tax=Nasonia vitripennis RepID=UPI00015B56EF E=0.0005 s/c=0.78 id=22% cov=45% ----------------------------------KKCLEEIVSTHRELRCPECRVLVSAK # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 2675 * 1883 1445 * * * * * * 2286 * * 1 0 * * * * * * 5775 0 0 E 2 4209 * 1246 1717 * * 5270 * 4379 5786 * 5368 5840 4303 * 4800 * * * * 2 0 * * * * * * 6825 0 0 D 3 3383 * 1821 2286 4124 5890 5943 4691 4148 5635 * 4485 6165 * 6037 4412 4724 4271 * * 3 0 * * * * * * 6981 0 0 E 4 5348 * 2304 1381 * 4042 * * 6671 5222 * 3639 5069 3505 * 5150 4831 6136 5954 * 4 0 * * * * * * 7106 0 0 D 5 4998 * 1933 1463 * 3925 7899 5419 4918 * * 3869 5510 4376 6290 4232 6258 * * * 5 14 6674 * 1585 585 * * 7253 1000 0 V 6 4658 5654 2992 1538 5632 3649 4714 6311 4191 * * * 3812 3770 * 4113 5293 5260 * 6482 6 0 * * * * * * 7292 0 0 P 7 3536 * 2640 3475 5784 4405 5494 4372 3260 4078 6563 6527 3167 4385 4073 4539 4034 6566 6746 * 7 11 7092 * 0 * * * 7305 1000 0 V 8 4232 4453 5609 3044 6433 * 5039 2760 6591 3474 4893 6387 6546 2819 5627 5335 3437 2992 * 6896 8 16 6528 * 1585 585 * * 7319 1000 0 C 9 * 0 * * * * * * * * * * * * * * * * * * 9 0 * * * * * * 7366 0 0 W 10 3623 4720 * * 6441 4940 * 4203 5549 5669 5691 6035 2408 * 1984 3904 4784 4590 3045 * 10 0 * * * * * * 7366 0 0 I 11 * * * * 4661 * * 503 * 4103 5165 * * * * * * 2709 * 5969 11 0 * * * * * * 7366 0 0 C 12 * 28 5696 * * * * * * * * * * * * * * * * * 12 56 6066 5430 2000 415 * * 7366 1623 0 N 13 4592 * * 6748 2928 * 4578 * 5573 1736 3294 4796 * 3802 3323 * 6526 * 6190 3051 13 49 5386 6710 1881 457 970 1030 7356 2124 1706 E 14 6139 5038 1995 1916 * 3962 * * * 4464 5203 5222 6462 3816 * 2965 5473 4539 * * 14 133 3502 * 1909 447 1000 1000 7334 3784 1580 E 15 4805 6615 2550 2259 * 3259 6179 4798 5618 6041 * 4539 4483 6635 5082 3910 3236 3812 * 6229 15 78 4242 * 513 1740 0 * 7357 2808 1000 L 16 4903 6243 3618 3620 3212 4459 * 4238 * 2621 3743 5042 4065 6631 5068 4690 4938 4378 5307 3791 16 54 5123 6903 1431 669 * * 7360 2154 0 G 17 5966 6339 2615 2497 * 4167 6804 6857 4192 4953 6466 3946 6469 3882 3916 2932 3609 5556 * 6045 17 64 4519 * 1908 447 * 0 7360 2208 1000 N 18 6334 * 2241 3195 7101 3782 6682 4651 4145 5749 * 3337 4406 3432 5420 3734 3438 4940 * * 18 14 6727 * 0 * * 0 7360 1000 1000 E 19 4709 6687 3111 2468 * 4141 5524 5072 4004 4700 5044 4231 2850 3964 4193 4732 3881 * * * 19 70 4409 * 1656 551 * 0 7360 2544 1000 R 20 6334 5482 3822 3392 5144 4432 5427 3940 3535 2433 6563 6743 6455 3971 4107 4579 3437 4295 5238 * 20 17 * 6430 * * 0 * 7360 0 1000 F 21 3959 4870 4218 4661 4209 6110 * 2895 5084 3175 4868 4454 6537 4646 6699 4050 3565 2930 * 4358 21 32 * 5511 * * * 0 7346 0 1000 R 22 4428 5359 4620 3580 6834 5252 4225 4634 3710 2535 5048 4863 6569 6816 3808 3024 3362 4277 * * 22 135 4628 4361 2223 348 1412 680 7331 2713 2057 A 23 4169 6242 5992 4877 5285 5621 6773 4225 6394 3711 6638 6535 1147 * 5203 5332 4206 4517 5037 4968 23 88 5643 4674 2392 305 1707 528 7319 1594 3443 C 24 4576 999 5520 6039 4414 * * 4607 5099 3217 * 4785 6395 * 6648 5413 6539 3457 * 6312 24 88 * 4079 * * 1134 878 7300 0 3757 G 25 3268 5076 6384 5430 6326 3784 3532 5039 2660 3468 6637 3736 5516 4105 3329 3898 6377 5264 * 6500 25 138 7317 3561 0 * 3009 191 7303 1000 3690 C 26 5453 572 * 5441 * * 4842 3955 * 6434 * 6859 4075 6611 4820 * 5450 4867 * * 26 40 * 5203 * * 1308 747 7317 0 4645 T 27 4716 3720 4495 5020 6323 3460 * 4891 2291 3370 5351 4893 5421 5699 3578 3685 3701 6413 * 5514 27 94 6569 4243 0 * 2372 310 7284 1000 3843 G 28 5344 4077 4211 6168 6621 1399 5249 6715 5884 * * 3827 3761 3983 5178 3462 4685 6189 * 5176 28 37 * 5293 * * 2783 226 7308 0 4130 E 29 * 1018 4996 3251 * 3376 * * 6505 6321 * * 5557 * * 2952 3624 5766 * * 29 16 6546 * 2000 415 1622 567 7297 1000 4326 L 30 6373 5274 5530 * * 3219 5530 3354 3726 2485 4002 4660 4724 4673 4308 4145 3501 4098 * 5229 30 34 * 5419 * * 182 3080 7329 0 3745 E 31 4006 3869 6347 6530 * 4437 1352 * 2713 6455 * 5176 * 3434 3675 4445 * * * * 31 34 5410 * 2322 322 * 0 7390 1575 2060 N 32 5033 * * 5785 4560 5646 3614 4010 4465 3105 5613 3621 * 6671 5124 4426 5238 2783 3837 2687 32 53 5879 5697 0 * 577 1601 7390 1569 2060 V 33 3835 5724 * * 1473 * * 2881 * 5744 5616 * * * * 5955 6432 2124 5307 3416 33 26 5834 * 0 * 1489 635 7419 1633 2223 H 34 * 2252 6137 * * 6205 392 * * * * * * * * * * * * * 34 0 * * * * 1000 1000 7425 0 1676 R 35 3386 * 4786 3644 4382 4791 4704 4775 3081 3837 5867 6459 * 3712 2612 4002 6694 4186 5324 5599 35 0 * * * * * 0 7433 0 1000 S 36 5679 * 2694 2886 5794 5110 3819 6807 3091 5677 5856 5022 4007 5345 4195 2750 3706 * * 6356 36 0 * * * * 0 * 7347 0 1000 C 37 * 36 * * * * 5330 * * * * * * * * * * * * * 37 14 6688 * 3322 152 * * 7373 1000 0 L 38 4831 * * * 4674 6387 * 1768 * 1146 3364 * * * * * * 4060 * 6471 38 0 * * * * * * 7373 0 0 S 39 4908 * 3338 3111 5746 5050 6000 4060 3915 4012 3842 4724 * 2796 3777 4847 6679 3712 6374 4573 39 0 * * * * * * 7373 0 0 T 40 4877 6374 6685 3175 * 4130 5727 4298 2730 6371 * 3975 5729 2996 2809 3711 3331 5834 * * 40 9 * 7369 * * * * 7373 0 0 W 41 5499 * * 6437 5180 * 7500 6440 * 4303 4483 * * * 5994 6389 6915 6854 442 4459 41 122 4648 4611 1474 644 * 0 7379 1991 1000 L 42 3474 4878 * 5841 2904 * 6291 2923 5655 1605 4931 * * 5934 4094 5646 6860 4104 5764 5716 42 78 6377 4618 3000 193 2364 312 7265 1000 2813 T 43 4594 6404 4471 2788 6695 * 5697 4081 3376 4595 6492 2736 * 3153 3285 3934 3987 6671 * 5906 43 46 5310 7264 2263 337 598 1559 7220 1673 3614 I 44 3634 5472 6716 3355 6478 6975 4137 3367 4219 4922 4337 5399 * 3973 4180 2772 3640 4048 * 4293 44 108 5341 4389 3218 164 389 2081 7356 1611 2180 S 45 4971 5601 5283 5419 * 4710 6152 * 2334 6629 * 3925 6380 3040 3179 1854 5236 5343 * * 45 165 3691 5028 2016 410 760 1288 7279 3453 2664 R 46 5824 6621 4119 3844 * 2105 4265 * 3541 * * 3327 5269 4072 2774 4594 6469 4501 6594 4784 46 96 4863 5074 1918 444 803 1228 7245 2684 2790 N 47 5563 * 5823 4968 6539 4111 4658 6794 2267 4921 * 2668 5360 4773 3200 2779 4070 4685 * * 47 109 3990 6688 2355 314 1216 812 7229 2927 2723 T 48 4383 5141 5575 4883 5486 4614 4917 5468 3151 3443 5029 3001 4043 4934 5287 3551 3791 3959 4991 5823 48 135 3655 6683 1347 721 471 1845 7267 3418 2471 A 49 5495 4624 6510 3799 6838 5504 6767 4900 2436 4441 6485 5633 * 4232 2804 3085 2777 4751 5539 * 49 95 3970 * 1983 421 0 * 7360 3461 1640 C 50 * 33 * 5478 * * * * * * * * * * * * * * * * 50 0 * * * * * * 7363 0 0 Q 51 5217 * 4293 3175 * * * * 5051 * * 5176 543 6635 * 6974 5399 6678 * 5993 51 0 * * * * * * 7363 0 0 I 52 3646 5836 * 5402 4519 * * 2444 * 1940 5247 5069 * 3532 * 4408 3438 3509 * 5558 52 14 6732 * 1000 1000 * * 7356 1000 0 C 53 * 36 5328 * * * * * * * * * * * * * * * * * 53 0 * * * * * * 7356 0 0 G 54 5980 * 6754 6020 * 3752 5067 * 2139 5427 6666 3379 * 3826 1289 * * * * 5684 54 0 * * * * * * 7345 0 0 V 55 2652 * * 4926 3485 6651 3727 5268 3200 * 5103 5621 * 3537 5854 4045 2731 3712 * 4104 55 0 * * * * * * 7340 0 0 V 56 5414 * 4730 2702 * * * 6393 3258 7290 5981 4226 2253 3197 4432 3891 3152 4382 * * 56 0 * * * * * * 7229 0 0 Y 57 5465 5681 * * 1603 * 5475 3250 * 4855 6113 * * * * * 6044 3676 4108 1734 57 0 * * * * * * 6970 0 0 N 58 4411 * * * * 6250 4899 5851 3264 * * 2063 * 3639 2557 2249 5064 4179 * * 58 0 * * * * * * 6954 0 0 T 59 6422 * 4564 * 4372 * * 1726 3220 3054 4911 * * * 5613 5796 2436 3169 * * 59 0 * * * * * * 6800 0 0 R 60 * * * * * * * * 642 * * * * 4782 1631 * * * * * 60 0 * * 0 * * * 5952 0 0 //