HHsearch 1.5 NAME d1v65a_ FAM FILE d1v65a_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1v65a_.a3m DATE Mon Mar 8 22:52:29 2010 LENG 64 match states, 64 columns in multiple alignment FILT 118 out of 738 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.3 EVD 0.4630 2.2021 SEQ >ss_dssp CCSSCSCCCCCCCTTCCCHHHHHTSCHHHHHHHHHHHHHTTTSCCCSCCCCCCCCCCCCCCCCC >sa_dssp EEEEEEDEEEEEEEDECEEEDCEECEEEDDEECDDEDEEEEEEEEEEEEEEEEEEEEEEEEEEE >ss_pred CCCCCCCEEEHHHHEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCC >ss_conf 9875567111121100399998416999999859999986412320525578801123688987 >Consensus gxxxxxxVtfeDVavxFsxEEWxxLdxxQkxLYrdvmxEnyxxlxSlgxxxxxxxxexxxxxxG >d1v65a_ GSSGSSGVTYDDVHMNFTEEEWDLLDSSQKRLYEEVMLETYQNLTDIGYNWQDHHIEESGPSSG >UniRef50_UPI000155C281(42-106:714) PREDICTED: similar to zinc finger protein 85 (HPF4, HTF1) n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155C281 E=5e-10 s/c=1.01 id=32% cov=98% --QKRMEVTFEDVAIFLTRWEWKSLTDAQRELYQCVMSETYEHLRSLGKdtPREGRATDDHHPPLG >UniRef50_O14978(218-273:683) Zinc finger protein 263 n=20 Tax=Mammalia RepID=ZN263_HUMAN E=1e-05 s/c=0.92 id=23% cov=89% --------SLEDVAMYISQEEWGHQDPSKRALSRDTVQESYENVDSLESHIPSQEVPGTQVGQG >UniRef50_Q8TD17(142-199:642) Zinc finger protein 398 n=22 Tax=Theria RepID=ZN398_HUMAN E=2e-14 s/c=1.39 id=29% cov=91% -------VAFDDVSIYFSTPEWEKLEEWQKELYKNIMKGNYESLISMDYAINQPDVLSQIQPEG >UniRef50_O14709(211-272:1029) Zinc finger protein 197 n=58 Tax=Euteleostomi RepID=ZN197_HUMAN E=3e-16 s/c=1.39 id=32% cov=98% -AQPQELVMFEEVSVCFTSEEWACLGPIQRALYWDVMLENYGNVTSLEWETMTENEEVTSKPS- >UniRef50_P51815(230-289:510) Zinc finger protein 75D n=28 Tax=Mammalia RepID=ZN75D_HUMAN E=4e-14 s/c=1.32 id=31% cov=95% --ESLSLLTFEDVAVYFSEEEWQLLNPLEKTLYNDVMQDIYETVISLGLKLKNDTGNDHPIS-- >UniRef50_Q9UJW8(68-136:692) Zinc finger protein 180 n=25 Tax=Chordata RepID=ZN180_HUMAN E=3e-12 s/c=1.06 id=28% cov=94% -----EGVNFKIVTVDFTREEQGTWNPAQRTLDRDVILENHRDLVSwdlataVGKkdSTSKQRIFDEEPANG >UniRef50_UPI0001555336(226-278:880) PREDICTED: similar to ZSCAN29 protein n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555336 E=7e-07 s/c=1.04 id=21% cov=75% ---------YENASMSLSQERQNHLVPPRRNLHRHLKQENYGNISSLGFGVSKPDI-------- >UniRef50_D2I4R5(224-282:546) Putative uncharacterized protein n=1 Tax=Ailuropoda melanoleuca RepID=D2I4R5_AILME E=8e-05 s/c=0.81 id=32% cov=59% ----------EDVALAFSPA-WTQLDSPQGSFHRDERQENCGGLTPLG---------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 2804 0 0 S 2 1986 4987 4814 * * 4031 * * * * * * * * 4812 1456 2467 * * 4702 2 0 * * * * * * 3504 0 0 S 3 4514 * * 3980 * 3617 * * 2858 * * * 4661 1852 3413 2079 * * 5241 * 3 0 * * * * * * 3373 0 0 G 4 4394 * * 3410 4618 2333 * 4354 3463 * * * 3929 3740 4904 2239 4333 5539 * 5453 4 35 5403 * 0 * * * 3472 1000 0 S 5 4934 * * 4459 * * 4990 * 2741 5443 2251 * 5470 2132 2624 4296 * 4515 * * 5 34 * 5416 * * * * 3466 0 0 S 6 4153 * 2029 1550 * 2762 * * * * 5456 5683 * * * 3621 4042 5290 * * 6 25 * 5856 * * * 0 3732 0 1000 G 7 4121 * * 5607 6229 3583 6051 4587 * 2782 4756 * 2738 5774 * 1494 3988 * * * 7 0 * * * * 0 * 3696 0 1439 V 8 * * * * * * * 4661 * 2999 3490 * * * * * * 422 * * 8 0 * * * * * * 4003 0 0 T 9 2968 * * * * 5978 * 4950 3740 * 5959 5501 * * * 2905 845 5577 * * 9 0 * * * * * * 4145 0 0 Y 10 * 6014 * * 519 * * 3933 * 2741 * * * * * * * * * 3803 10 0 * * * * * * 4213 0 0 D 11 7338 * 3950 1129 * 4658 6630 * 2010 * 7445 6455 * 4178 4283 6152 7506 7036 6615 6280 11 0 * * * * * * 4386 0 0 D 12 * * 253 3620 * * * 5585 * * * 4087 * * * * * * * * 12 0 * * * * * * 4383 0 0 V 13 5091 * * 6300 * * * 3222 * 3769 4489 * * * * * 5900 482 * * 13 0 * * * * * * 4383 0 0 H 14 722 7130 7160 6679 5262 5664 5321 6311 * 5307 6747 6283 6530 * * 2648 3987 7454 * * 14 0 * * * * * * 4383 0 0 M 15 5267 * * * 5107 * * 2711 6076 3890 3306 * * * * * 5065 818 6416 * 15 26 5835 * 1000 1000 * * 4383 1000 0 N 16 5764 4720 2155 4018 4751 5466 5601 5598 5927 7590 * 3484 6011 5524 6959 3817 5554 6751 * 1744 16 0 * * * * * * 4383 0 0 F 17 * * * * 355 * * 4676 * 2660 * * * * * * * * * 5575 17 0 * * * * * * 4383 0 0 T 18 * * 7413 * * * * 4671 * 6153 * 6670 6283 * 5727 919 1466 * 6868 * 18 0 * * * * * * 4383 0 0 E 19 4541 * 5199 3108 * 5531 5652 * 4353 3920 6748 * 3936 1732 2634 6342 5571 5572 4361 5838 19 57 * 4690 * * * * 4380 0 0 E 20 5101 * 4175 419 * 4031 * * 5273 * * * 6725 4949 5111 * * * 6697 * 20 32 * 5519 * * 623 1513 4337 0 1764 E 21 5837 * 4261 344 * * * * 3974 * * * 6493 4374 5683 * * * * * 21 0 * * * * 619 1518 4332 0 1788 W 22 * 6301 * * * 7040 * * 6709 4740 * * 6627 4176 * 5871 * * 254 6460 22 0 * * * * * 0 4416 0 1000 D 23 2653 7181 4888 2561 6362 2456 * * 3161 7381 7365 5325 * 3430 3490 5630 4487 4604 * * 23 0 * * * * 0 * 4416 0 1000 L 24 6715 3127 5356 6498 6652 6926 3696 5555 4607 1817 * 5296 7686 2887 4493 3465 5111 5851 7064 4478 24 0 * * * * * * 4463 0 0 L 25 * * * * * * * * * 183 4459 * 5963 4672 * * * * 5751 * 25 15 * 6630 * * * * 4463 0 0 D 26 6244 * 1162 3422 * 4154 5370 5880 6119 * * 3175 * 6943 5285 4276 3211 5758 * 6320 26 0 * * * * * 0 4394 0 1000 S 27 5102 6924 3856 3210 7144 5625 6452 7598 4881 3858 * * 1167 5151 7826 2864 5939 7148 * * 27 19 6269 * 1000 1000 * 0 4394 1000 1000 S 28 1930 * 4340 4171 7033 5024 * 7416 * 7460 7087 6119 4119 5449 5940 2210 3648 4376 3159 6924 28 0 * * * * 0 * 4394 0 1000 Q 29 * * * 4657 * 6931 7092 * 6370 6883 * * 5251 251 4451 * * * 6418 * 29 21 * 6097 * * * * 4463 0 0 K 30 * * * * * 5269 * 6785 1146 * * * * 4317 1219 * 6805 6733 6081 * 30 0 * * * * 0 * 4380 0 1000 R 31 2909 6107 2702 2406 * 7447 6442 5732 4803 6216 * 3058 * 6574 4136 3082 3355 5545 * * 31 0 * * * * * * 4463 0 0 L 32 4961 5963 * 7605 3686 * * 6377 * 386 5740 * * 7090 5284 * 6308 5182 * * 32 18 * 6367 * * * * 4463 0 0 Y 33 * 4034 4757 * 4255 * 4005 * * * * * * 5629 * 3986 * * * 506 33 0 * * * * * 0 4454 0 1000 E 34 6214 6250 * 5251 * 5340 4969 * 2559 * 6457 5612 * 4345 1049 * 6646 5158 3215 6543 34 22 * 6023 * * * 0 4454 0 1000 E 35 6598 6665 1068 2656 * 6600 4164 * 5324 * * 2905 * 5440 6538 4577 6150 * * 5062 35 74 5634 5052 0 * 838 1183 4432 1256 1504 V 36 5363 * 6873 5509 4673 4856 * 4261 * 4501 4913 6572 * 6570 6183 * 4144 620 * * 36 0 * * * * 461 1870 4433 0 1993 M 37 5432 * * * * * * 4074 4138 3902 688 * * * 4332 * 3782 4307 * * 37 0 * * * * * 0 4454 0 1000 L 38 6623 * * 6387 * * * * 2967 1164 4625 * 4762 2450 4124 5035 6626 6642 4818 * 38 16 * 6481 * * 0 * 4454 0 1000 E 39 5867 * 3152 425 * 5066 * * 6378 * 6923 5448 * 6103 5154 6631 * * * * 39 18 * 6354 * * 0 * 4443 0 1000 T 40 6134 6340 5985 * * * 6292 4487 5066 * * 658 * 6327 * 4837 2618 6156 * 6371 40 0 * * * * * 0 4361 0 1000 Y 41 6057 3233 6576 * 2380 * 4020 7141 * 4644 7217 5675 * * 6090 6587 * 4543 6832 1107 41 0 * * * * 0 * 4342 0 1000 Q 42 5788 7645 6537 2494 * 2549 5125 5175 5012 6321 * 5644 * 3287 2229 2807 6480 6160 6138 * 42 0 * * * * * * 4344 0 0 N 43 4530 6635 3672 * * 6316 3500 4838 7010 3471 6656 1301 * 6099 5174 3751 3454 * * 6518 43 15 * 6581 * * * * 4339 0 0 L 44 6567 * * * 5032 6292 * 4620 * 856 2969 * 7059 * * 6263 6625 2362 * * 44 0 * * * * 0 * 4328 0 1000 T 45 2782 6220 4759 6976 6225 5242 * 3295 * 3314 5104 6412 * * 4820 4333 3036 1707 * * 45 0 * * * * * * 4312 0 0 D 46 4209 7429 5675 * 3785 6042 * * * 5287 * * 5093 * * 478 4786 * 6659 6203 46 30 5597 * 2585 263 * * 4305 1000 0 I 47 5557 * * * * * * 4021 * 758 4121 * * * 5247 * * 2046 * * 47 28 6358 7087 1000 1000 * * 4377 1000 0 G 48 5952 * 3118 3455 * 486 * * * * * * * * 5430 5858 * 5421 * * 48 39 5222 * 1798 489 * 0 4411 1844 1000 Y 49 * 4122 5765 4721 2580 * 3554 4294 3571 2478 7135 5356 * 6733 * 5127 4492 4246 5762 2898 49 99 4334 5903 2147 369 * 0 4421 2058 1000 N 50 3299 4061 5403 4339 * 4665 4242 4826 3984 6358 * 3588 2497 3744 7249 3940 3194 5315 6856 6285 50 58 5907 5468 3614 123 635 1490 4528 1413 1680 W 51 5859 6666 5762 * 3879 4867 4553 2490 5786 3927 4653 5956 5297 * 4872 4302 4353 2358 3244 4961 51 22 7229 6887 3000 193 978 1023 4562 1000 2178 Q 52 3786 6599 6969 3192 * 4425 4348 6472 3687 6083 5160 5627 2676 4375 4303 2182 4473 * 6968 5406 52 0 * * * * 585 1585 4471 0 1840 D 53 * 6221 3175 3851 * 3645 5827 5051 1513 5948 * 4512 4977 5329 3066 4116 5166 7211 * * 53 17 6376 * 2000 415 0 * 4476 1000 1000 H 54 4773 * 4742 3948 * 6626 3597 * 4023 5010 * 6649 1214 3020 4940 5317 5684 6484 6984 6018 54 55 4733 * 2355 314 * * 4428 1889 0 H 55 5007 * 1741 2652 4847 6342 4602 * 4341 * * 2859 6426 4412 4041 4887 3804 * * 6591 55 37 6010 6635 1816 482 * * 4419 1438 0 I 56 * 5899 5555 4070 5688 5432 * 1976 6485 2275 4238 6389 6763 * * 5400 4249 2186 * 5820 56 184 3060 * 2681 245 0 * 4368 2732 1000 E 57 4660 * 5464 894 4381 * * 6161 3903 3942 6045 5950 4197 4597 6599 * 4069 6872 * * 57 104 4555 5211 1072 931 * * 4348 1710 0 E 58 3946 * 2274 1854 * 3726 5756 * 5244 6135 5707 4046 4011 3605 5109 5229 * 4740 * * 58 17 6402 * 2000 415 0 * 4337 1000 1380 S 59 3408 * 4761 3280 5875 5152 3312 * 4775 3626 5916 5558 3533 3022 5975 3340 2980 * 6169 * 59 33 5488 * 1000 1000 * * 4340 1000 0 G 60 3999 3102 4980 3718 4811 2241 4544 5240 5781 5738 * 5805 3655 3977 * 2915 * 6132 5325 5191 60 0 * * * * * * 4359 0 0 P 61 * * * 5499 5615 5378 * 4942 3924 4880 5647 * 1514 2425 4442 3179 * 3499 * * 61 0 * * * * * * 4333 0 0 S 62 4682 * 5098 2527 * 4504 5990 * 5450 * * 2788 2563 4727 * 1718 * 5659 * * 62 0 * * * * * * 4324 0 0 S 63 * * 5275 3050 * * * * 5801 4009 * 4509 2233 2233 4440 2160 4866 * * * 63 0 * * * * * * 4247 0 0 G 64 * * * * * 0 * * * * * * * * * * * * * * 64 0 * * 0 * * * 3812 0 0 //