HHsearch 1.5 NAME d1uuja_ FAM FILE d1uuja_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1uuja_.a3m DATE Mon Mar 8 16:15:14 2010 LENG 76 match states, 76 columns in multiple alignment FILT 32 out of 36 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.3 EVD 0.4767 1.7070 SEQ >ss_dssp CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTTCCCCHHHHHHHTTHHHHHHTCHHHHHHHHHHHHHHHHHTTC >sa_dssp EDDEEDDDCDCCBCAACCDDDEEDEDBDECCEECEBECDEEBCEEBEDCCEEEEEBEEDDEEDDEEDDDEEEEEEE >ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >ss_conf 9878999999999999999638965699999983056541200011115477888999999999999999998619 >Consensus iLtxrQxxeLxxaIxxYlxxxxxxexxxxxxxxxxlxxxxxxxxxxxxlLEKKWtsvxRLQkKIxeLExxxxxlqe >d1uuja_ VLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDXNEELDKKYAGLLEKKWTSVIRLQKKVXELESKLNEAKE >UniRef50_Q6CU55(1-76:439) KLLA0C07513p n=1 Tax=Kluyveromyces lactis RepID=Q6CU55_KLULA E=1e-06 s/c=0.71 id=35% cov=101% MLTYKQRQSLNHAICDYVRQNEGSDELLVQLESVLLPNGSDVIPQDPNLLERKWNSIVRLQSKIMELEKNCEELQK >UniRef50_Q6BUA6(6-84:529) Nuclear distribution protein PAC1 n=5 Tax=Saccharomycetaceae RepID=NUDF_DEBHA E=2e-16 s/c=1.10 id=30% cov=100% ILTARQQQELNKAIIQYIKPIAEEandgDLIQKLSESLDVPLGSIDDSVIPNYLEKKWSTVLRLQHKIIDLEGEVSNLR- >UniRef50_C5DF48(3-94:457) KLTH0D12188p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DF48_LACTC E=1e-10 s/c=0.74 id=31% cov=101% LLPPEQRQLLHRCILNYIrsqvpgdgaegETGGQTEERHVMNSLAKwLRVDPDGldgeKAADGSLLPRKWSSIVRLQRRIIELEKEIQELTD >UniRef50_C5DY07(5-80:444) ZYRO0F09284p n=1 Tax=Zygosaccharomyces rouxii RepID=C5DY07_ZYGRO E=5e-05 s/c=0.64 id=26% cov=100% -LSDEQIRELDESTLDYLLWRNKGIDITQLANSLQVDAPTLQEDTNRlPLLARKWTAIARLQRRIMSLEQNIRDLRE >UniRef50_Q6FWT9(4-83:467) Similar to uniprot|P39946 Saccharomyces cerevisiae YOR269w PAC1 n=1 Tax=Candida glabrata RepID=Q6FWT9_CANGA E=4e-12 s/c=0.91 id=30% cov=100% -LTDSQVNDLHCSIYRYVQWvsqnNGSSDLLNKLQSVLDIDELQlSLDDGDQMLLPKKWGSIIRLQRAITKLEQKCDALQQ >UniRef50_C4R6H3(4-83:500) Protein involved in nuclear migration, part of the dynein/dynactin pathway n=1 Tax=Pichia pastoris GS115 RepID=C4R6H3_PICPG E=2e-09 s/c=0.80 id=35% cov=95% ILTKKQDIELRRAVIQYLRyfvPEFAQDTAVntisrlLLDADLNKFDNEIQRMIPKQYLEKKWTAVLRLHRKVEELERTI----- >UniRef50_B7FNU7(2-84:439) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FNU7_PHATR E=1e-12 s/c=0.89 id=37% cov=96% VLTDRQRADLHAGIYEYLQSRGdayqkvvealaQADPECTIPHTTTTSNGSSAGLTKTPLLEKKWTAIPRLQKKVLELERQAS---- >UniRef50_B6KPZ5(3-102:552) WD-40 repeat protein, putative n=2 Tax=Toxoplasma gondii RepID=B6KPZ5_TOXGO E=4e-09 s/c=0.62 id=31% cov=99% -LRKRQEEQLHQALLLYLQQR-FPETARVFQEEAQLHGGTAGVsadassggnlenegaspgrerlsaalDMDADLLPRRWAATARLQASVARLQNQVSRQ QE # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * V 1 * * * * * * * 1272 * 2389 2852 * * * * * * 1963 * * 1 0 * * * * * * 3897 0 0 L 2 * * * * * * * * * 0 * * * * * * * * * * 2 0 * * * * * * 4293 0 0 S 3 * * * * * * * * * * * * 3612 3813 4145 2853 617 * * * 3 0 * * * * * * 4293 0 0 Q 4 3274 * 2064 2589 * * * 4547 3349 3813 * * 4557 4079 * 3110 5353 * * 4748 4 0 * * * * * * 4293 0 0 R 5 * * * 3413 * * 4668 * 2777 * * * 3813 * 806 4479 4917 * * * 5 0 * * * * * * 4293 0 0 Q 6 * * * * * * * * * * * * * 0 * * * * * * 6 0 * * * * * * 4293 0 0 R 7 3246 * 4585 4145 * * * 4282 2933 * * * * 2223 1494 * * 4479 * * 7 0 * * * * * * 4293 0 0 D 8 3715 * 2676 2366 * * * 4585 * 3813 * 3682 * 3156 4282 3121 3264 * * * 8 0 * * * * * * 4293 0 0 E 9 * * 2154 816 * * * * * 4557 * * * 4145 * 4748 3813 * * * 9 0 * * * * * * 4293 0 0 L 10 * * * * * * * 4854 * 51 * * * * * * * * * * 10 0 * * * * * * 4293 0 0 N 11 * * 3581 4811 * * 1279 * * * * 1634 * 4836 4595 * * * * 3834 11 0 * * * * * * 4290 0 0 R 12 4784 4530 * 4294 * 4790 3959 * 1757 3250 * * * 3457 2052 * 4811 * * * 12 0 * * * * * * 4290 0 0 A 13 813 4601 * * * 3787 * * * * * * * * * 1657 * * * * 13 0 * * * * * * 4290 0 0 I 14 * * * * * * * 421 * 3421 * * * * * * 4294 3198 * * 14 0 * * * * * * 4290 0 0 A 15 3599 3721 * * 4811 * 3838 2184 * 1321 * * * * * * * * * 3111 15 0 * * * * * * 4290 0 0 D 16 2867 * 2015 2688 * 4811 * * * 4154 * 4601 * 1992 3720 * * * * * 16 0 * * * * * * 4290 0 0 Y 17 * * * * * * 3834 * * * * * * * * * * * * 105 17 0 * * * * * * 4290 0 0 L 18 * * * * 2863 * * 3297 * 927 3641 * * * * * * 2692 * * 18 61 4601 * 3459 138 * * 4290 1000 0 R 19 5381 * * 2667 * * 4384 * 3979 3035 * 4939 * 1707 3357 3708 4749 4836 * * 19 61 4595 * 1585 585 * * 4290 1000 0 S 20 3679 * * 4836 * * * 4841 5096 * * 4880 2208 3425 3745 3111 2625 * 2979 * 20 64 4530 * 2000 415 * * 4290 1000 0 N 21 3792 4682 * 4595 * 4601 5096 3773 5381 2862 * 1609 * * 2477 4841 * * * * 21 138 * 3457 * * * * 4290 0 0 G 22 4827 3232 * 4601 4430 1238 * * * 4331 * 2159 * * * * 4725 * * 4828 22 104 3852 * 2921 204 0 * 4148 1633 1509 Y 23 3638 * * 3674 2514 4760 4836 * 3581 2907 * 3966 * 3253 * 3054 * * * 3503 23 53 4790 * 2322 322 * * 4290 1000 0 E 24 2638 * 4811 2872 * 4294 5001 * * * * * 3421 1859 * 3131 3298 * * * 24 47 4957 * 2000 415 * * 4290 1000 0 E 25 * * 2077 1270 * * * 4294 * * * 3220 5141 4841 3834 * 4143 * * * 25 48 4939 * 4087 87 * * 4290 1000 0 A 26 2422 * 4294 3232 * * * * * 3728 * 3870 3600 * * 2257 2181 * * * 26 52 4811 * 0 * * * 4290 1000 0 Y 27 1891 * * 3600 3561 * 3358 3588 * 1831 * 4609 * * 4601 * * * * 5694 27 0 * * * * * * 4290 0 0 S 28 2290 4784 3834 4609 * * 4601 * * 4760 * 3992 * 3898 3549 3041 3364 3215 * 5141 28 61 4595 * 2585 263 * * 4290 1000 0 V 29 3145 * * * * 4939 * * 3728 3121 * * * 3110 4790 5676 2396 1725 * * 29 0 * * * * * * 4290 0 0 F 30 4790 * * * 1856 4682 * 4784 * 1304 3384 * * 3589 5141 * * * * * 30 0 * * * * * * 4290 0 0 K 31 3040 * 2777 5096 * * * * 2395 2550 5001 4601 4784 3330 3293 4957 * * * * 31 27 * 5738 * * * * 4290 0 0 K 32 3275 * 5314 1913 * * 4711 * 2920 3637 * 4296 4782 4149 3815 3246 4827 * * * 32 57 5733 5667 3000 193 * 0 4319 1000 1000 E 33 * * 3673 1396 * * * * * 3427 * * * 3285 * 2139 4703 3635 * * 33 39 5231 * 1585 585 1000 1000 4324 1000 1174 A 34 1910 * * 4921 * * * 5121 * 1478 * * * * 4406 2959 3323 4740 * * 34 0 * * * * 0 * 4319 0 1000 E 35 * 4790 3728 2567 4682 4584 * * 3866 3938 * 2683 * 3222 * 3001 3600 4841 * * 35 114 3720 * 1499 630 * * 4290 1627 0 L 36 * * * 4073 * 4682 * 3441 3689 1135 5459 * * 3902 * * 4784 2731 * * 36 33 5480 * 1000 1000 * * 4290 1000 0 D 37 4790 * 2277 5001 4595 3689 4154 * 4841 3489 * 4394 2910 * 3706 2557 * * * * 37 166 3764 4836 2573 265 * * 4290 1701 0 X 38 4247 * 3612 3619 3290 2806 * * 4056 3757 * 3254 4729 4766 * 2871 * 3879 * 5575 38 48 4927 * 0 * 0 * 4290 1000 1000 N 39 4682 * 2162 * * 1906 * 3547 4357 4530 * 2974 4294 * * 3579 * 5001 * * 39 0 * * * * * * 4290 0 0 E 40 5381 * 2868 2176 * * * * 4850 * * 5141 3174 3138 * 2315 2951 * * * 40 209 3921 3860 1016 984 * * 4290 1583 0 E 41 3075 * 2202 2573 * 5413 * 3327 * 3454 * * * 5105 * 2678 3378 * * * 41 83 5052 5289 2000 415 * 0 4239 1000 1556 L 42 3658 4544 4797 * * 2555 * 5022 5260 3218 4813 * 3431 2904 * 3331 4486 3300 * * 42 97 3947 * 2106 381 558 1640 4236 1537 1986 D 43 3980 * 1997 3498 5692 4745 * 3780 2965 * 5455 * * * 3717 5416 3929 2716 * * 43 132 3520 * 4280 76 * 0 4260 1601 1000 K 44 2534 * 1736 5155 * 4776 * 4816 3074 4745 4506 4349 3366 * * 4888 5357 5455 * * 44 56 5692 5731 2322 322 0 * 4260 1000 1000 K 45 3690 * * 4771 * 4518 * 2395 1861 * 4145 * 4858 4746 5440 3943 2976 4903 * * 45 0 * * * * * 0 4299 0 1000 Y 46 * * 2013 4827 * * * 3992 3905 4858 * 4287 4569 * 3753 3789 * 3657 * 2097 46 144 3803 5440 2462 289 * 0 4299 1681 1000 A 47 2074 * 4146 2558 * 3690 * * 4553 * * 3143 3285 3742 4272 * 3758 * * * 47 132 3520 * 0 * * 0 4300 1659 1333 G 48 * * 3429 * * 1664 * * * 3828 4506 2317 3482 3779 5062 4575 4562 * * * 48 165 3213 * 2851 215 1021 980 4300 1971 1333 L 49 * * * * * * 3817 3299 * 681 * * * * * * * * * 2296 49 0 * * * * 0 * 4290 0 1000 L 50 * * * * * * * * * 0 * * * * * * * * * * 50 0 * * * * * * 4290 0 0 E 51 4294 * * 441 * * * * * 4682 * * 2529 * * * * * * * 51 0 * * * * * * 4290 0 0 K 52 * * * * * * * * 296 * * * * * 2432 * * * * * 52 0 * * * * * * 4290 0 0 K 53 * * * * * * * * 126 * * * * * 3581 * * * * * 53 0 * * * * * * 4290 0 0 W 54 * * * * * * * * * * * * * * * * * * 0 * 54 0 * * * * * * 4290 0 0 T 55 3288 * * * * 4530 * * * 4811 * 2802 * * * 2556 1071 5096 * * 55 0 * * * * * * 4290 0 0 S 56 2178 * * * * 3834 * * * * * * * * * 1105 2035 * * * 56 0 * * * * * * 4290 0 0 V 57 * * * * * * * 1251 * 3834 * * * * * * 4154 1141 * * 57 0 * * * * * * 4290 0 0 I 58 3222 * * * * * * 2411 * 1641 * * 3787 * * * 3960 2014 * * 58 0 * * * * * * 4290 0 0 R 59 * * * * * * * * * * * * * * 0 * * * * * 59 0 * * * * * * 4290 0 0 L 60 * * * * * * * * * 0 * * * * * * * * * * 60 0 * * * * * * 4290 0 0 Q 61 * * * * * * 3638 * * * * * * 177 * 4841 * * * * 61 0 * * * * * * 4290 0 0 K 62 4154 * * * * * 4957 * 854 * * * * * 1637 4760 * * * * 62 0 * * * * * * 4290 0 0 K 63 4530 * * * * * * * 510 * * * * * 2335 4154 * * * * 63 0 * * * * * * 4290 0 0 V 64 * * * * * * * 639 * * * 4836 * * * * * 1630 * * 64 0 * * * * * * 4290 0 0 X 65 4143 * * 4571 * * * 2050 * 1961 1630 4802 * * * * 4505 * * * 65 0 * * * * * * 4308 0 0 E 66 * * 1303 1288 * * * * 4530 * * * * * 4154 4294 4841 * * * 66 0 * * * * * * 4290 0 0 L 67 * * * * * * * * * 46 5001 * * * * * * * * * 67 0 * * * * * * 4290 0 0 E 68 * * * 138 * * * * * * * * * 3455 * * * * * * 68 0 * * * * * * 4290 0 0 S 69 3623 * * * * 4876 * * 3579 * * 2075 * 2225 3025 2398 4748 * * * 69 0 * * * * * * 4213 0 0 K 70 * * * 1718 * * * * 2783 * * 2963 * 2503 2303 * 4528 * * * 70 0 * * * * * * 4213 0 0 L 71 4620 2945 * * * * * 1956 * 2559 * 3166 * * * * 3104 2521 * * 71 0 * * * * * * 4226 0 0 N 72 5213 * 3195 2229 * * 3100 * * * * 5215 * 2477 4039 2098 * 4926 * * 72 0 * * * * * * 4113 0 0 E 73 3007 * 3894 2109 * * * 4982 * 4736 * 2959 * 2763 3108 * 3114 * * * 73 0 * * * * * * 4000 0 0 A 74 4880 * * * * * * * * 364 * * * 3807 * 4421 * * * 3813 74 0 * * * * * * 4000 0 0 K 75 * * * * * * * * 3176 * * 3429 * 1090 2551 * 2678 * * * 75 0 * * * * * * 3971 0 0 E 76 * * 3369 491 * * * * 3393 * * * * 3374 * * * * * * 76 0 * * 0 * * * 3434 0 0 //