HHsearch 1.5 NAME d1utga_ FAM FILE d1utga_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1utga_.a3m DATE Tue Mar 9 04:07:07 2010 LENG 70 match states, 70 columns in multiple alignment FILT 12 out of 16 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.3 EVD 0.4081 0.3350 SEQ >ss_dssp CCCHHHHHHHHHHHHSCHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTSGGGC >sa_dssp EDDEEECDBCDCBBDCDDEDBDDCCEEDECDEEEDEDBCDDAEECDEDEEEDCDECBEECCEECECEEDE >ss_pred CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC >ss_conf 9157899999999348989999997504998899999999999974389101999999999974084569 >Consensus GICPafxxxvxxllxGTpeeYxxxlkxynxxxxxxeaaxxLKxxvDxLxxexKxxixkLxxkIxxSxxCx >d1utga_ GICPRFAHVIENLLLGTPSSYETSLKEFEPDDTMKDAGMQMKKVLDSLPQTTRENIMKLTEKIVKSPLCM >UniRef50_Q06318(23-90:96) Uteroglobin n=9 Tax=Glires RepID=UTER_MOUSE E=5e-15 s/c=1.21 id=55% cov=99% -ICPGFLQVLEALLMESESGYVASLKPFNPGSDLQNAGTQLKRLVDTLPQETRINIMKLTEKILTSPLC- >UniRef50_Q5EG14(10-73:73) Secretoglobin (Fragment) n=4 Tax=Laurasiatheria RepID=Q5EG14_HORSE E=1e-11 s/c=1.11 id=45% cov=93% GICQRFVGIVQALYLGTPASFEAAVEPFKPDADMKAAATQLKTLVDFLPKNAKDSILKLMDKIV------ >UniRef50_Q8TD33(30-91:95) Secretoglobin family 1C member 1 n=13 Tax=Mammalia RepID=SG1C1_HUMAN E=0.0007 s/c=0.73 id=27% cov=89% -----FMDFLQTLLVGTPEElYEGTLGKYNVNEDAKAAMTELKSCRDGLQPMHKAELVKLLVQVLGS---- >UniRef50_UPI000155BC8D(24-92:98) PREDICTED: hypothetical protein n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BC8D E=5e-18 s/c=1.33 id=29% cov=100% GVCPVFLDIVNKLFTGTFREYLQSLQPYHPTEAMIEAVSELKGLVNLLSPEHKATVLQLMGNIVFSKEC- >UniRef50_P30438(24-92:92) Major allergen I polypeptide chain 1 n=2 Tax=Carnivora RepID=FEL1A_FELCA E=1e-15 s/c=1.22 id=26% cov=99% -ICPAVKRDVDLFLTGTPDEYVEQVAQYKALPVVLENARILKNCVDAkMTEEDKENALSVLDKIYTSPLC- >UniRef50_UPI00017C3CE6(24-83:83) PREDICTED: similar to fel d I chain 1 precursor with leader B, partial n=2 Tax=Bos taurus RepID=UPI00017C3CE6 E=2e-06 s/c=0.89 id=24% cov=79% -ICPAVREDVYLFVRGTPEEYIAKVKEYNTNSAIVANARRLKDRVDeKLTEEDKQN--------------- >UniRef50_Q8CH46(1-70:70) Androgen-binding protein alpha subunit (Fragment) n=7 Tax=Murinae RepID=Q8CH46_APOAG E=3e-06 s/c=0.76 id=29% cov=100% GLCPALDKKVELFLHGSLENYLDHVKSYNNNDAVLQEAENIKQCADSrLTDEDKAHIAALIERIKASPSC- >UniRef50_Q91WB5(23-92:92) Androgen binding protein alpha n=15 Tax=Eutheria RepID=Q91WB5_MOUSE E=2e-15 s/c=1.20 id=27% cov=100% GLCPALQRKVDLFLNGTTEEYVEYLKQFNENTKVLENAANIKKCSDrTLTEEDKAQATSLINKITASRTC- >UniRef50_UPI00017C36F4(35-92:100) PREDICTED: similar to salivary androgen-binding alpha subunit n=7 Tax=Bos taurus RepID=UPI00017C36F4 E=1e-10 s/c=1.17 id=17% cov=66% -ICPALRDSINLFISGSHEAYIEHVEKYNKTTDVLETADTLKSCTD------------------------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 2675 0 0 I 2 * * * * * * * 607 * 2172 * * * * * * * 3038 * * 2 0 * * * * * * 3311 0 0 C 3 * 0 * * * * * * * * * * * * * * * * * * 3 0 * * * * * * 3311 0 0 P 4 * * * * * * * * * * * * 161 3240 * * * * * * 4 0 * * * * * * 3311 0 0 R 5 1029 * * * * 3389 * * * * * * * * 2296 3488 * 3038 * * 5 0 * * * * * * 3311 0 0 F 6 * * * * 874 * * * * 1819 * * * * * * * 2551 * * 6 0 * * * * * * 3431 0 0 A 7 3472 * 3502 * * * * * 3519 2370 3557 * * 2322 2643 * * 3384 * * 7 0 * * * * * * 3431 0 0 H 8 * * 1895 3583 * 3384 3472 * 2752 * * * * 3535 2139 * * * * * 8 0 * * * * * * 3431 0 0 V 9 * * 2551 * 3557 * * 2300 2273 * * * * * * 3706 * 1956 * * 9 0 * * * * * * 3431 0 0 I 10 * * * * * * * 2011 * 2546 * * * * * * * 784 * * 10 0 * * * * * * 3431 0 0 E 11 * * 2280 1531 * * * * * * * 2444 * 2468 * * * * * 3583 11 0 * * * * * * 3431 0 0 N 12 2457 * * * * * * 4055 3221 1344 * 3472 * * * * 2587 * * * 12 0 * * * * * * 3431 0 0 L 13 * * * * 1139 * * * * 874 * * * * * * * * * * 13 0 * * * * * * 3431 0 0 L 14 * * * * 2579 * * 3706 * 794 * * * * * * * 3583 * 3384 14 0 * * * * * * 3431 0 0 L 15 * * * * * * 3502 * * 2427 2576 3076 * * 3583 3706 2362 3557 * * 15 0 * * * * * * 3431 0 0 G 16 * * 3618 3535 * 265 * * * * * * * * * * * * * * 16 0 * * * * * * 3431 0 0 T 17 * * * * * * * * * * * * * * * 1993 417 * * * 17 0 * * * * * * 3431 0 0 P 18 * * * 3535 3221 * 3706 * * 3502 * * 935 * * * 3076 * * * 18 0 * * * * * * 3431 0 0 S 19 3384 * 3519 1146 * * * * * * * * * * 3221 1956 * * * * 19 0 * * * * * * 3431 0 0 S 20 3706 * * 1054 * 3535 * * * * * 3502 * * * 1903 * * * * 20 128 3557 * 0 * * * 3431 1000 0 Y 21 * * * * 3384 * * * * * * * * * * * * * * 145 21 0 * * * * * * 3431 0 0 E 22 * * * 1505 * * * 2643 * 2355 * * * * * * * 1775 * * 22 0 * * * * * * 3431 0 0 T 23 1527 * 3502 1824 * 3557 * * * * * * * 3221 * * 3472 * * * 23 0 * * * * * * 3431 0 0 S 24 2496 * * * * * 2600 * 3583 * * * * 3519 * 1818 3557 * * 3076 24 0 * * * * * * 3431 0 0 L 25 * * * * * * * * * 1037 3618 * * * * * * 1213 * * 25 0 * * * * * * 3431 0 0 K 26 3519 * * 1978 * 3557 * * 1099 * * * * 3221 * * * * * * 26 0 * * * * * * 3431 0 0 E 27 * * * 2526 * * * * 2630 3618 * * 1517 2779 * 3502 * * * * 27 0 * * * * * * 3431 0 0 F 28 * * * * 1279 * * * * * * * * * * * * * * 766 28 0 * * * * * * 3431 0 0 E 29 * * * 3472 * * 3221 * 2450 * * 894 * * * 3618 * * * * 29 0 * * * * * * 3431 0 0 P 30 3519 * * 4097 * * * * 2870 * * 3502 1118 * * * 3583 3557 * * 30 0 * * * * * * 3431 0 0 D 31 * * 1610 * * 3535 * * * 3519 * 1666 * * * * 2444 * * * 31 0 * * * * * * 3431 0 0 D 32 3384 * 2487 2379 * * * * * * * * 3519 3618 * 2559 2357 * * * 32 0 * * * * * * 3431 0 0 T 33 1842 * 1234 * * * * * 4097 * * 4055 * * * * 3472 3519 * * 33 0 * * * * * * 3431 0 0 M 34 3557 * * * * * * 3583 * 3535 1417 * * * * * * 1431 * * 34 0 * * * * * * 3431 0 0 K 35 * * * * * * * 3221 1884 1431 * * * 3535 3618 * * 3583 * * 35 0 * * * * * * 3431 0 0 D 36 1920 * 3472 1086 * * * * * * * 3535 * 3502 * * * * * * 36 0 * * * * * * 3431 0 0 A 37 874 * * 3502 * * * * * * * 1789 * * * * 3706 * * * 37 0 * * * * * * 3431 0 0 G 38 862 * * * * 1956 * * * * 3557 * * * * * * 3221 * * 38 0 * * * * * * 3431 0 0 M 39 2322 * 3706 3502 * * * * * * 3472 * * * 2551 3221 1905 * * * 39 0 * * * * * * 3431 0 0 Q 40 * * * 2379 * * * 3519 * * * 2273 * 1500 3583 * 3706 * * * 40 0 * * * * * * 3431 0 0 M 41 * * * * * * * 2273 * 508 3472 * * * * * * * * * 41 0 * * * * * * 3431 0 0 K 42 * * * * * * * * 0 * * * * * * * * * * * 42 0 * * * * * * 3431 0 0 K 43 * * 3583 * * 3221 * * 1785 * * 3519 * 3502 3535 2630 3384 * * * 43 0 * * * * * * 3431 0 0 V 44 * 1134 * * * * * * * 1432 * * * * 3583 * * 3472 * * 44 0 * * * * * * 3431 0 0 L 45 3502 * * * * * * * * 3472 * * * * 3557 3076 3706 885 * * 45 0 * * * * * * 3431 0 0 D 46 * * 164 * * * * * * * * 3221 * * * * * * * * 46 356 2192 * 0 * * * 3431 1548 0 S 47 3470 * * * 3274 3428 * * 3427 3127 * * * * * 2369 1678 * * * 47 303 2402 * 0 * * * 3364 1550 0 L 48 * * * * * * * * * 136 3470 * * * * * * * * * 48 0 * * * * * * 3364 0 0 P 49 * * * * * * * * * * * * 1389 3428 * 3127 1284 * * * 49 0 * * * * * * 3364 0 0 Q 50 * * 3337 1681 * * * * 3274 * * * 2270 1844 * * * * * * 50 0 * * * * * * 3364 0 0 T 51 * * * 690 * * * * 3485 * 3428 3274 * * * * 3402 * * * 51 0 * * * * * * 3364 0 0 T 52 3330 * 1352 * * * 2109 * * * * * 3458 * * * 2425 * * * 52 0 * * * * * * 3322 0 0 R 53 * * * * * * * * 468 * * * * * 1851 * * * * * 53 0 * * * * * * 3322 0 0 E 54 1199 * 3330 1795 * * * 3425 * * * * * 3577 * * * * * * 54 0 * * * * * * 3322 0 0 N 55 * * * 3200 * * 3154 * * * * 1418 * 3452 * 2393 3024 * * * 55 0 * * * * * * 3322 0 0 I 56 2151 * * * * * * 939 * 3001 * * * * * * * 2964 * * 56 0 * * * * * * 3342 0 0 M 57 3014 * * * * * * 3402 * 1497 2313 * * * * * 3305 3001 * * 57 0 * * * * * * 3342 0 0 K 58 3014 * * * * * * * 936 * * * * 2964 * 2151 * * * * 58 0 * * * * * * 3342 0 0 L 59 * * * * * * * * * 191 * * * * * * * 3011 * * 59 0 * * * * * * 3342 0 0 T 60 * * * * * * * 2152 * 2006 1622 * * * * * 2313 * * * 60 0 * * * * * * 3342 0 0 E 61 * * 2146 1253 * 2964 * * * * * 3305 * * * * * 3001 * * 61 0 * * * * * * 3342 0 0 K 62 * * * * * * * * 683 * * 2964 * 3001 3014 * * * * * 62 0 * * * * * * 3342 0 0 I 63 * * * * * * * 193 * * * * * * * * * 3001 * * 63 0 * * * * * * 3342 0 0 V 64 3402 * * * * * * * 3014 2151 * * * * * * 3305 1594 * 3011 64 0 * * * * * * 3342 0 0 K 65 2065 * * * 2802 2847 * * 3110 * * * * 3137 * * 2005 * * * 65 0 * * * * * * 3224 0 0 S 66 * * * * * * * * * * * * * * * 0 * * * * 66 0 * * * * * * 3224 0 0 P 67 * * * * * * * * 2495 * * * 835 * 2954 2912 * * * * 67 0 * * * * * * 2861 0 0 L 68 * * * 2495 * * * * * 876 * * * * * 2750 2954 * * * 68 0 * * * * * * 2861 0 0 C 69 * 0 * * * * * * * * * * * * * * * * * * 69 0 * * * * * * 2861 0 0 M 70 * * * * * * * * * * 0 * * * * * * * * * 70 0 * * 0 * * * 1000 0 0 //