HHsearch 1.5 NAME d1urfa_ FAM FILE d1urfa_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1urfa_.a3m DATE Mon Mar 8 20:51:59 2010 LENG 81 match states, 81 columns in multiple alignment FILT 77 out of 81 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.6 EVD 0.5182 2.1423 SEQ >ss_dssp CCTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCCC >sa_dssp EEDDEEEECDDCCDDDDDEBEEDCDDACEDDDDAEEDEDEDEEDCEDBDDDCEDBDDDCDECEEDCEEBEEDDEEEEECEE >ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC >ss_conf 986201699999999999999999999999999724884027879999999998999999999999999950531420597 >Consensus xxxxxxxxrlxxLxxxLxvExkikeGaenmxxxxxxxxxxDrKxxxeAqxxlxeSxxKixlLrxxLxkxxqxxxxexxxxp >d1urfa_ GIPATNLSRVAGLEKQLAIELKVKQGAENMIQTYSNGSTKDRKLLLTAQQMLQDSKTKIDIIRMQLRRALQADQLENQAAP >UniRef50_B6VQ53(351-429:1138) Protein F46F6.2b, partially confirmed by transcript evidence n=2 Tax=Caenorhabditis elegans RepID=B6VQ53_CAEEL E=1e-05 s/c=0.64 id=24% cov=73% -------------------EKLIMDGSRNMIRILRSKRKPDSKAVDEAMNSYVIASEKADLIKLALLKYASSLPLEH---- >UniRef50_Q91948(195-273:901) PKN n=3 Tax=Euteleostomi RepID=Q91948_9PIPI E=5e-11 s/c=0.87 id=23% cov=79% -----NELRIEEVRHHYRVERAVAEGAENALRMLGAARTQDKSAINEVQARILESQQRTDLLALSLQR------------- >UniRef50_O62570(184-253:1102) Protein kinase C-related kinase (PRKSD) n=1 Tax=Suberites domuncula RepID=O62570_SUBDO E=2e-08 s/c=0.86 id=23% cov=69% -------ARISLLRYRVDVETRLMQGARSIMKA----NPNDKKSWQSAQKSIDFSFQKLRLLKLSL--------------- >UniRef50_Q8SSJ0(701-770:865) PROTEIN KINASE C (EPSILON TYPE) n=1 Tax=Encephalitozoon cuniculi RepID=Q8SSJ0_ENCCU E=3e-08 s/c=0.85 id=27% cov=78% ---------LKSLEEDLNTEMAIKEGIEKIRALLQG------KTLEEANMQLEGSNRKISQLKAEIERCRKSTMVEN---- >UniRef50_A8Q594(105-178:536) Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q594_MALGO E=7e-07 s/c=0.74 id=26% cov=84% ---------ISQLEYKLQLERQFKHGYDKIARLYQAES--DRRSQGDAMNQRTESAGKLVLIQQALKRYQQLDMRDDE--- >UniRef50_P36582(114-188:988) Protein kinase C-like 1 n=2 Tax=Schizosaccharomyces pombe RepID=PCK1_SCHPO E=0.0007 s/c=0.60 id=27% cov=69% ---------LQHLQMRLSIEQQCVSGIEKIMSLYS----KEQKDKTDVIIKLKEGKQKVNLLKRSLKR------------- >UniRef50_Q4RPP2(61-139:242) Chromosome 12 SCAF15007, whole genome shotgun sequence n=1 Tax=Tetraodon nigroviridis RepID=Q4RPP2_TETNG E=8e-11 s/c=0.86 id=24% cov=99% --PFSASPRVAELQHYVQRETDALVVANDVAERLEAVASPDHQAAAEARLRAQESSQKLHLLRQSLERRLRENNPENLQPP >UniRef50_C4JIY4(109-177:1247) Putative uncharacterized protein n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JIY4_UNCRE E=3e-08 s/c=0.87 id=31% cov=84% ----TSEQRQAIIRSKLEKELKIRNGTENMLEALLTKNLKQTKEQrLRVESELSSSNRKIAQLQSELEEELQ---------- >UniRef50_C5M9Y7(119-186:1121) Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M9Y7_CANTT E=8e-06 s/c=0.76 id=19% cov=72% ---------LQYLEFKLQVENKYSEANKKLSHLYLMDG--DKSSSNAAAGGKAESDQRIHLLEKALKK------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1828 0 0 I 2 2051 * * * * * * 2022 * * * * * * * * * 965 * * 2 0 * * * * * * 1975 0 0 P 3 * * * * * * * * * * * 2568 267 * * * * * * * 3 345 2232 * 0 * * * 2480 1000 0 A 4 1101 * * * 2178 3467 * * * * * * * * * 2169 * * * * 4 0 * * * * * * 2737 0 0 T 5 3232 * * * * * * * * * * * * * * 1881 987 3087 * * 5 0 * * * * * * 3076 0 0 N 6 2123 * * * * * 3418 * * 3290 * 1936 * 3809 * 2302 4670 * * * 6 0 * * * * * * 3335 0 0 L 7 * * * 1711 4005 * * 3418 * 3970 * 2750 * * * 1972 * * * 3809 7 93 4005 * 0 * * * 3335 1000 0 S 8 3717 * 4571 5301 * * * * * 3351 * 4877 3259 2937 * 1147 4726 * * * 8 0 * * * * * * 3880 0 0 R 9 * * * * * * * * 2995 * 4416 5207 * * 384 * * 4864 * * 9 29 5631 * 0 * * * 4132 1000 0 V 10 * * * * * * * 2053 * 827 6097 * * 4363 * * * 3073 6227 * 10 0 * * * * * * 4861 0 0 A 11 2157 * 5909 2234 * * 5359 6027 4847 4272 * 5837 * 2424 5984 2673 4507 * * * 11 0 * * * * * * 4890 0 0 G 12 3477 * 6234 1952 6953 5308 5150 5806 * 4486 5462 4682 * 2086 * 3438 4278 4509 * 5079 12 0 * * * * * * 4949 0 0 L 13 * * * * * * * 3132 * 219 * * * * * * * 5217 * * 13 20 6211 * 2000 415 * * 4938 1000 0 E 14 * 6151 * 1740 * * * * 4186 5925 * 5561 * 2030 1518 * * * * * 14 0 * * * * * * 4938 0 0 K 15 * * 5743 4365 2201 6134 2171 * 2499 4531 5248 * * 5834 2911 6122 5803 * * 4329 15 0 * * * * * * 4938 0 0 Q 16 4199 * 5726 2457 * 6257 3280 * 1927 * 6153 * * 2840 2708 * * * * 4088 16 0 * * * * * * 4989 0 0 L 17 6181 * * * 5408 * * 2359 * 673 4316 * * * * * * 3968 * 5242 17 0 * * * * * * 4989 0 0 A 18 5149 * 3058 4052 * 5838 5419 * 4238 * * 3893 * 1997 2268 2883 4767 * * * 18 0 * * * * * * 4989 0 0 I 19 * * * * * * * 1725 2278 5534 6289 * * * 3150 * 5726 1620 * * 19 0 * * * * * * 4989 0 0 E 20 * * * 0 * * * * * * * * * * * * * * * * 20 0 * * * * * * 5062 0 0 L 21 3811 * * 4866 6668 * 6381 7524 3138 1775 3400 4346 * 3975 3656 3803 3413 * * 6786 21 0 * * * * * * 5062 0 0 K 22 2414 * 4759 * * * * * 1310 4726 * 5568 * 1924 4324 * * * * * 22 0 * * * * * * 5062 0 0 V 23 4759 5294 * * 5622 * * 1587 * 4857 6241 * * * * * * 1542 * 2370 23 0 * * * * * * 5062 0 0 K 24 3505 * * * * * * 5619 1038 4014 4034 * * 4367 2943 6350 * 3457 * * 24 0 * * * * * * 5062 0 0 Q 25 5060 * 3215 1125 * * 5622 * 3913 6771 * 4662 * 3297 5381 3575 5519 4759 * * 25 0 * * * * * * 5062 0 0 G 26 2946 * * * * 263 * * * * * * * * * * * 4759 * * 26 0 * * * * * * 5062 0 0 A 27 825 * * * 5568 * * 3125 * 4496 * 3150 * * * 3716 4931 6208 * 5622 27 0 * * * * * * 5062 0 0 E 28 5460 * 4236 742 * * * * 2677 * 6318 4372 * 6252 3612 * 6119 * * * 28 0 * * * * * * 5062 0 0 N 29 * * 4759 * * * * * 1561 * * 1000 * 5381 3979 5425 6218 * * * 29 0 * * * * * * 5062 0 0 M 30 4166 * * * 4509 * * 2989 * 2313 1393 * * * * * * 2377 * * 30 0 * * * * * * 5081 0 0 I 31 3315 * * * * * * 2230 5647 2150 3586 * 5348 * 2861 3986 3984 3849 * * 31 15 * 6556 * * * * 5081 0 0 Q 32 4431 * * 2763 * * 4057 * 1899 * * 6753 * 2613 1832 5351 * * * * 32 46 * 5008 * * * 0 5078 0 1000 T 33 2437 * * * * * * 3960 * 1467 3467 * * 5166 4754 4676 3376 3342 * * 33 261 * 2593 * * * 0 5038 0 2007 Y 34 * 5688 * * 3544 * * 6126 * 1235 * * * * * * * 5395 * 1211 34 24 5912 * 0 * * 0 4807 1000 3004 S 35 5688 * 5632 4194 * 3158 * * 5116 3319 * 3838 * 1970 4048 2126 4324 * * * 35 102 * 3868 * * * 0 4807 0 3004 N 36 2504 4214 6370 * * 3681 4879 3852 * * 3554 3505 * 5857 * 2178 2990 4673 * * 36 92 * 4022 * * 3009 191 4718 0 3489 G 37 3754 * 2612 3643 * 1626 * * 2583 * * * * 4361 3920 6754 6476 4551 * 6205 37 15 6636 * 0 * 1729 518 4774 1000 3665 S 38 3868 6543 5435 * * 2035 5295 * 2233 5075 * 3909 5082 * 3256 3056 4658 5314 * * 38 469 * 1850 * * 1048 954 4847 0 3106 T 39 2588 * * 4435 5767 * 5683 4352 2784 4676 * * 3179 5093 * 2478 2792 4247 * * 39 28 5683 * 0 * 2062 395 4618 1000 3557 K 40 5424 * 4598 * * * 5309 6371 1539 5246 * 5052 3202 3795 3383 5334 2493 5762 * * 40 111 3756 * 883 1127 492 1792 4742 2156 3335 D 41 * * 331 3542 * * * * 5348 * * * * 3794 * 5457 * * * * 41 0 * * * * 509 1751 4981 0 2091 R 42 4767 * * * * 5666 4804 * 1649 * * 5712 5556 4302 1318 4580 4186 * * * 42 0 * * * * 0 * 5051 0 1000 K 43 * * * 5355 * * 5533 * 662 * * * * 4001 2422 3776 * * * * 43 0 * * * * * * 5077 0 0 L 44 2174 * 5353 3600 5533 * 6226 4660 5580 2416 7432 6040 * * * 1617 5789 5402 * * 44 0 * * * * * * 5077 0 0 L 45 4264 * * * 5207 * 4095 3454 3522 1366 5645 * * 3220 6489 3389 * 4652 5484 * 45 100 3897 * 0 * * * 5077 1657 0 L 46 1744 * 4731 4103 * 3629 * 5645 * 4040 * 3597 * 3327 * 2075 5353 * * * 46 15 6610 * 5555 31 * * 5077 1000 0 T 47 2777 * 2441 1211 * * 4672 6366 * * * 6782 * 5699 3600 5152 5914 * * 5007 47 0 * * * * * * 5077 0 0 A 48 575 * * * * * * 4851 * * * * * * * 4514 6317 2072 * * 48 0 * * * * * * 5077 0 0 Q 49 3824 * 4759 1904 5699 * 4594 5353 5635 5756 4733 5789 * 1421 4143 * 5985 * * * 49 0 * * * * * * 5077 0 0 Q 50 2508 * 5133 6380 * 2708 * 5353 4153 4073 5139 3155 * 2627 * 3149 4268 5418 * * 50 0 * * * * * * 5077 0 0 M 51 * * * 3897 * 3180 * 3751 2970 4221 2039 5699 * 3578 2883 3554 * * * * 51 22 6026 * 1000 1000 * * 5077 1000 0 L 52 3605 * * * 4809 * * 4410 3977 985 5207 * * 4517 3343 * * 4456 * 4282 52 0 * * * * * * 5077 0 0 Q 53 3698 * 4210 4184 5635 * * 3925 2633 3863 4900 3737 * 2668 4717 3640 4963 3905 6040 * 53 0 * * * * * * 5077 0 0 D 54 4782 * 2295 1178 5484 5789 * 4371 3984 * * 3979 * 5699 * 3874 6040 * * * 54 0 * * * * * * 5077 0 0 S 55 4338 5012 * * * 5353 * * * * * * 5355 * * 200 * * * * 55 0 * * * * * * 5077 0 0 K 56 4952 * 3554 3679 5484 5875 * 6762 2486 5580 * 2488 * 4641 3341 2224 5306 * * * 56 0 * * * * * * 5077 0 0 T 57 3253 * 5985 4177 * 4939 * 6276 3724 6021 4704 4633 * 1562 2965 4448 3809 * 6551 6134 57 0 * * * * * * 5077 0 0 K 58 * * * * * * * * 233 5528 * * * * 2970 * * * * * 58 0 * * * * * * 5077 0 0 I 59 5823 * * * * * * 1070 * 1547 5577 * * * * 5741 5333 3331 * * 59 0 * * * * * * 5081 0 0 D 60 2978 * 2106 2233 * 4191 3767 * 5226 5525 6491 4842 * 3725 4133 5006 6348 5092 * * 60 0 * * * * * * 5081 0 0 I 61 6313 * 4704 3734 3901 * 5974 5162 5862 860 4717 * * 3725 * 6032 * 5503 * 4512 61 0 * * * * * * 5090 0 0 I 62 * * * * * * * 2494 * 308 6062 * * * * * * * * * 62 0 * * * * * * 5090 0 0 R 63 5314 * * 4346 * * 3578 * 1919 * * 4700 * 3858 1157 * 5523 * * * 63 0 * * * * * * 5090 0 0 M 64 4167 * 5935 5458 6437 6194 5030 * 2941 2481 2176 4919 * 2975 4651 4435 5548 * 5843 4892 64 0 * * * * * * 5090 0 0 Q 65 2082 * 6240 2851 * * * * 3600 * 4624 6190 * 2674 4656 1948 5658 * * * 65 0 * * * * * * 5090 0 0 L 66 * * * * * * * 1900 * 574 4414 * * * * * * 6240 * * 66 50 4879 * 1000 1000 * * 5090 1605 0 R 67 4535 * 5119 2309 * * 6293 4409 1906 2814 5170 6601 * 3870 4434 5489 4326 6048 * 5847 67 0 * * * * * * 5086 0 0 R 68 5540 * 5657 3602 * * 5883 * 1393 * * * * 4005 1411 4629 * * * * 68 0 * * * * * * 5086 0 0 A 69 2546 3643 * 4060 * * * * * 2209 4978 * * 5595 2988 * * 3185 * 2442 69 0 * * * * * * 4697 0 0 L 70 3775 * * 2390 * 5687 * * 3804 2593 * 5858 * 2847 3285 2405 6118 5840 * * 70 0 * * * * * * 4697 0 0 Q 71 3814 * * 4826 * * * * 4065 * * * * 1056 3381 2559 3516 * * * 71 0 * * * * * * 4635 0 0 A 72 2763 * 4520 3686 * * * * * 4116 4345 5181 * 2269 3586 2187 3530 * * * 72 50 4871 * 2322 322 * * 4463 1000 0 D 73 * * 2692 4076 * 3219 * * * 3004 * 2340 * * 3880 3784 2211 * * * 73 0 * * * * * * 4229 0 0 Q 74 * * * 2336 * * * * 3611 * 2784 3284 2965 3005 * 2187 * * * * 74 0 * * * * * * 4190 0 0 L 75 * * * * * 3792 * * * 2194 * * 2262 2795 3249 4933 4468 2527 * * 75 0 * * * * * * 3744 0 0 E 76 2841 * 2105 814 * * * * * * * * * 4075 * * * * * * 76 0 * * * * * * 3756 0 0 N 77 * * 2403 * * 3346 2526 * * * * 892 * * * * * * * * 77 0 * * * * * * 3607 0 0 Q 78 * * 2312 2135 * * * * * 1265 * * * 2690 * * * * * * 78 0 * * * * * * 2713 0 0 A 79 2291 * * * * 1948 * * * * 2228 * * 1630 * * * * * * 79 0 * * * * * * 2263 0 0 A 80 1109 * * * * 2228 * * * * * * 1630 * * * * * * * 80 0 * * * * * * 2263 0 0 P 81 * * * * * * * * * * * * 0 * * * * * * * 81 0 * * 0 * * * 2263 0 0 //