HHsearch 1.5 NAME d1tzya_ FAM FILE d1tzya_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1tzya_.a3m DATE Mon Mar 8 18:15:19 2010 LENG 106 match states, 106 columns in multiple alignment FILT 117 out of 218 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.8 EVD 0.4368 0.3536 SEQ >ss_dssp CCCCHHHHHTCSSCHHHHHHHHHHTTSSSCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHTSHHHHHHTTTCCCTTCCCCCCCC GGGSCC >sa_dssp EEEDCBDEDECEDDADDBBDDCEEDEEDEECDEEDADEDADDDCEDDDCCEECACDCBEEDEDEEDDDCBCBBBBCECEEBDEECEEDECEEAEECEEEE EEEEEE >ss_pred CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCC HHHHCC >ss_conf 9864221126220399999998518622500234689999999999999999999999654962742999987551898899884780115898477322 886089 >Consensus kxxsxsxraxLxFPvxRixrxlkxxxxxxrisxxapvxlaaxlEylxxeilexAxxxaxxxkxkxIxpxhlxxAIxxdexlxxLxxxvxixxggvxpxix xxllxx >d1tzya_ KAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQ AVLLPK >UniRef50_Q8SSG3(30-114:128) Histone H2A n=1 Tax=Encephalitozoon cuniculi RepID=H2A_ENCCU E=4e-10 s/c=0.77 id=28% cov=81% ---------------SQIKKIMKDRTR-MRISKDALVAVSACVMYLISEITDGAKNVASTDGKKKVMPKHINNAICNDTELHFVGHDWLIKNGGMKSYIA P----- >UniRef50_UPI00015B431F(3-95:226) PREDICTED: similar to NC2alpha n=1 Tax=Nasonia vitripennis RepID=UPI00015B431F E=7e-10 s/c=0.70 id=19% cov=86% ---SKKKKYNARFPPGRIKKIMQTDEEVGKVAQAVPIIISRTLELFVHSLLTKTMQITSAKQAKTLSPSHMKQCILSEsrfDFLKDLVKNLPDASG---- --------- >UniRef50_B3SCQ2(89-173:1171) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SCQ2_TRIAD E=3e-09 s/c=0.74 id=26% cov=77% ------KRSHLSACVDKFHSVLQKDILCYKIDQQLSLYVITVADYLICNILKLTGTYIRNIKHTEIGSQDIKIAMFANNPLQELFNR------------- ------ >UniRef50_O17072(107-188:232) NFYC-1 protein n=1 Tax=Caenorhabditis elegans RepID=O17072_CAEEL E=1e-05 s/c=0.62 id=15% cov=69% -------------PMARVKKIMRidDDVRNFMIASDAPIFMAQAAEFFIEEMTAMGWQYVSEARRRILQKADIASAVQKSDQFDFLI------------- -------- >UniRef50_Q8LMX6(50-141:335) Os10g0191900 protein n=4 Tax=Oryza sativa RepID=Q8LMX6_ORYSJ E=4e-07 s/c=0.61 id=22% cov=86% ---------ELILPISRVKNIIHAKEGGMMLSADTPAFVTKLCELFVQELILRAWVCANSHNREIILGTDIAEAITTTESYHFLANVVHGHQalGSNIPE I------- >UniRef50_D1IJQ8(1-60:129) Whole genome shotgun sequence of line PN40024, scaffold_6.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IJQ8_VITVI E=0.0002 s/c=0.79 id=31% cov=27% --------------------------------------------------------HAEANKRRTLQPCDIGRAIRCYPTLHFL---------------- ------ >UniRef50_C4M2S5(134-210:212) Nuclear transcription factor, putative n=2 Tax=Entamoeba RepID=C4M2S5_ENTHI E=2e-09 s/c=0.83 id=20% cov=70% ------------FPPARIRKLTKINIDNKQLKTETVEILSRACELFIKDLTTRAGYITSYSKRKVIKKDDIVKAIVSDEKFDFLI--------------- ------ >UniRef50_A3LRE3(93-174:284) DNA-directed DNA polymerase epsilon, subunit C n=1 Tax=Pichia stipitis RepID=A3LRE3_PICST E=1e-07 s/c=0.70 id=22% cov=34% ---------------------------------------------------------AKMDKRKKIQYRDFSTSVASHDALAFLSDTVPRTQ-------- ------ >UniRef50_A9TUW3(194-288:304) Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TUW3_PHYPA E=6e-11 s/c=0.72 id=28% cov=77% RASSRAKKSQqslltLAFPISRVRRLVKSEGDIQWVGVEAGFLIAKATEIFLEKLVEDAFERMQGNGQASILYPHLSSHVASSERL-------------- ----------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * 4320 * * * * 328 * * * * * 2707 * * * * * 1 0 * * * * * * 4127 0 0 A 2 2710 * * * * * * * 1736 3777 5541 4556 2132 3192 4570 * * 5044 * * 2 0 * * * * * * 4502 0 0 K 3 * * * 2480 * * 5215 * 1913 * 5255 5324 * 2601 4072 3536 * 2585 * * 3 0 * * * * * * 4687 0 0 S 4 4779 * * 5402 * * * * 5025 5349 * 5529 4731 * 4581 600 3014 * * * 4 0 * * * * * * 4738 0 0 R 5 * * * * * 3860 4267 * 1397 4799 * * * 3663 1471 * 5392 * * * 5 0 * * * * * * 4846 0 0 S 6 3190 * 4865 * * * * 4723 2854 * * * 4402 * 5409 849 4214 * * * 6 22 * 6057 * * * * 5065 0 0 S 7 2106 * 4793 5735 * * * * 2212 * * 6087 6093 3098 4845 2472 3675 4120 * * 7 0 * * * * * 0 5194 0 1000 R 8 * * * * * 4927 * * 1167 * * * * * 1006 * * * 5398 * 8 22 * 6036 * * 0 * 5194 0 1000 A 9 926 5393 5523 * * 3798 * * * 4706 * 4841 5005 * * 2575 5827 5573 * 4458 9 0 * * * * * 0 5263 0 1000 G 10 4689 * 6604 2368 * 1311 4940 * 4020 * * 4503 5662 4586 * 3675 4096 5808 * * 10 101 4382 5664 1617 569 * 0 5454 2172 1000 L 11 4723 5321 * * * * * 4716 * 468 5230 * 6044 * * 4554 4645 4572 * 6658 11 58 5451 5916 2585 263 934 1069 5592 1000 1508 Q 12 4421 * * * 5285 * 5652 3032 4727 4545 * 4712 * 2073 3654 2869 3114 3361 * * 12 32 5528 * 1000 1000 1037 964 5739 1440 1741 F 13 5269 * * * 464 * * 4133 * 2666 * * * * * * * 5288 * 6814 13 0 * * * * 0 * 5888 0 1000 P 14 6208 5545 * * * * * 5936 5203 5487 * 5847 402 * 5659 3429 6326 * * * 14 11 * 7077 * * * * 5907 0 0 V 15 4959 5208 * * * * * 2964 * 3447 3375 * 4573 * * 7017 3639 1016 * * 15 0 * * * * * 0 5898 0 1000 G 16 1975 6380 4380 6318 * 1758 * * 5563 * * 4379 * * * 1866 4881 * * * 16 0 * * * * * 0 5898 0 1000 R 17 * 5155 * 5375 * * 6473 * 3228 4966 * * * 3908 492 * * * * 5638 17 15 * 6588 * * * 0 5911 0 1000 V 18 5373 * * * 3554 * * 1150 * 5275 5056 * * * * * 5564 1461 * * 18 0 * * * * * 0 5917 0 1357 H 19 5325 * 4384 2655 4252 4896 2297 * 1717 * * * * * 3050 6613 * * * 4519 19 0 * * * * * 0 5917 0 1357 R 20 6753 * * * * * 4636 6256 2058 6243 * 4419 6299 4304 1040 4501 5329 7237 * 6363 20 25 5890 * 0 * 848 1170 5917 1000 1357 L 21 6016 6473 * * 4582 * 5054 1653 5976 1840 5285 * * 6118 6106 5006 * 4025 3733 3923 21 0 * * * * * 0 5911 0 1000 L 22 * 6371 * * 5628 * * 4211 * 990 1532 * * * * * 5849 4403 * * 22 0 * * * * 0 * 5911 0 1000 R 23 * * * 6594 6455 6832 5716 * 1344 5993 * * * 2277 2127 5944 5431 4846 4995 * 23 10 7109 * 1000 1000 * * 5915 1000 0 K 24 3233 * 3523 2244 * 5690 5816 5231 2415 5666 5026 4706 * 4606 4089 3017 5721 6248 * * 24 18 * 6316 * * * * 5915 0 0 G 25 3752 * 1831 3486 * 2000 * 4990 5429 5134 5268 3933 * * 3692 4887 5658 * * * 25 0 * * * * 0 * 5907 0 1000 N 26 6062 4916 3998 3044 * 5799 5735 4043 5246 6115 * 3334 3913 3523 2457 4128 3409 4511 * * 26 57 * 4688 * * * * 5915 0 0 Y 27 4925 * 2341 3715 4964 5538 4186 5740 5461 3154 5459 6226 4957 6595 4527 5539 5769 4341 * 2183 27 51 5584 6189 0 * 0 * 5827 1508 1675 A 28 2197 4212 6294 * * 3650 4907 3243 6113 6410 * 3827 7454 4387 * 3314 4346 2601 * 4974 28 63 6514 4978 1146 868 0 * 5912 1269 1000 E 29 * 5954 4375 4281 4767 2775 5474 5391 2596 5564 4326 4953 4747 4063 3528 5329 6428 4243 4568 3813 29 34 5412 * 713 1359 * 0 5797 1948 1000 R 30 * 3915 * * 5384 * 5207 5047 2382 6343 3751 6431 * 4833 1187 4398 6435 * 6312 5903 30 11 7047 * 0 * 0 * 5814 1000 1000 V 31 5645 3391 * * 5239 * * 1471 * 2669 4797 * 5727 * * * 6935 1850 * * 31 31 * 5541 * * * * 6066 0 0 G 32 3367 * 3769 7281 * 2237 4707 * 5886 * 6531 4232 * 7269 * 1172 6994 5844 * 5937 32 0 * * * * 707 1368 6110 0 1468 A 33 2199 4698 4003 4489 * 5398 6264 5599 4040 5928 * 5240 5732 3123 5167 2012 4676 6282 * 6112 33 0 * * * * * 0 6116 0 1000 G 34 3478 * 3150 2663 * 3857 5077 * 6862 6349 5069 4813 5668 4663 4916 2227 3108 6824 * 5370 34 0 * * * * * 0 6116 0 1000 A 35 767 6040 * * * 6796 * * * 5791 6330 * * * 4916 4888 2628 2956 * * 35 0 * * * * * 0 6116 0 1000 P 36 2885 6284 * * * 6331 * 5656 * 3962 6743 6114 1158 5170 * 3060 4623 3393 * * 36 0 * * * * * 0 6173 0 1000 V 37 5061 * 5537 5995 3641 * 4941 2530 5425 3810 6935 * 7590 * * 4522 * 1109 * 4970 37 0 * * * * * 0 6173 0 1000 Y 38 3936 * * * 2529 * * 4426 * 2092 6222 * 6604 * * 6780 5437 4149 * 1442 38 0 * * * * * 0 6155 0 1000 L 39 5923 6173 * * 3948 * * 2654 * 1162 3886 * 4961 * * 5416 4643 2879 * * 39 5 8116 * 3000 193 * 0 6155 1000 1000 A 40 1384 5516 * * * 3517 * 4973 * 5573 * 4761 * * * 1995 2926 4822 * * 40 0 * * * * * 0 6155 0 1000 A 41 1023 4926 4986 * * 4751 * * 2445 5506 6764 * * 5834 3493 6417 5317 4839 * 6209 41 0 * * * * * 0 6187 0 1000 V 42 1560 4646 * * 6404 5758 * 2931 * 5025 4626 * * * 5149 4338 5123 1826 * * 42 0 * * * * * 0 6321 0 1000 L 43 4077 3438 * * * * * 3561 * 968 4101 5149 * * * 6153 3045 5016 * * 43 0 * * * * * 0 6321 0 1000 E 44 6161 * 4779 249 * 4824 * * 6788 * 6332 5571 * 5031 * * * * * * 44 0 * * * * * 0 6321 0 1000 Y 45 6615 * * * 4103 * 5646 3366 6113 2402 4435 4314 * * * 5495 * * 6172 1063 45 0 * * * * * 0 6553 0 1000 L 46 * * * * 1342 * * 4059 * 1159 5305 * * * * 5297 * 4411 * * 46 0 * * * * * 0 6553 0 1000 T 47 3350 6012 * * 6517 5176 * 2442 * 2685 4229 * * * * 4210 2052 2646 * * 47 0 * * * * * 0 6832 0 1000 A 48 1887 5450 6137 2986 6745 4099 4880 5013 3595 4351 6436 6697 4469 4019 5798 3386 4915 5941 * 6544 48 0 * * * * * 0 6709 0 1000 E 49 * * 3526 1092 6252 * 6177 * 3282 5540 * 3788 * 4970 4215 3552 5890 * * 4937 49 12 * 6915 * * * 0 6709 0 1000 I 50 4949 * * * 3694 * * 1943 * 1456 5283 * * * * * 5567 2191 * * 50 0 * * * * 922 1082 6545 0 1319 L 51 4362 6820 * * 5532 * * 3229 * 1237 3956 6528 6664 * * 5086 3180 2714 6314 * 51 0 * * * * * 0 6610 0 1000 E 52 5227 7080 3294 989 * 4956 6850 5824 3329 4720 6663 6335 * 4943 6561 4961 3906 * * * 52 0 * * * * * 0 6483 0 1000 L 53 4726 4961 4553 3562 * 4857 6612 5846 3685 1546 3377 * * 4676 3297 * 4648 5003 * 6335 53 0 * * * * * 0 6483 0 1000 A 54 841 * * * * 4021 * * * * * * * 4961 * 2409 3012 4804 * * 54 17 6441 * 0 * * 0 6483 1000 1000 G 55 3412 4770 4961 * 4621 1435 5574 5436 6049 5198 5599 5177 * * * 4200 * 3992 3274 3805 55 0 * * * * * 0 6483 0 1000 N 56 5907 * 4141 3346 * 5830 6115 5071 2762 7409 4814 1770 * 3964 5365 3721 3911 4640 * 6191 56 0 * * * * * 0 6501 0 1000 A 57 2640 5066 5334 2956 5588 5963 4668 3563 6060 * 5840 4054 * 4428 5456 3997 5741 2672 * 3394 57 0 * * * * * 0 6502 0 1000 A 58 1082 5821 * * * * * 5680 * 6135 5979 * 4579 * 4238 3710 2217 3756 * * 58 13 6839 * 2322 322 * 0 6537 1000 1000 R 59 5385 5249 4416 3475 * 6856 4957 6398 2455 5055 * 4134 * 3190 2096 3296 * 4455 * * 59 0 * * * * * 0 6537 0 1000 D 60 4289 * 2527 2811 6158 4715 6522 4864 3092 3635 5325 3244 * 4821 5800 3462 4987 * * 4979 60 0 * * * * * 0 6544 0 1000 N 61 5144 6539 3664 4682 7159 5323 3327 4137 3295 4459 6525 2595 5011 4702 3580 2698 5390 * * * 61 0 * * * * * 0 6544 0 1000 K 62 6505 * 6525 * * 2582 4264 * 1464 5011 * 2906 * 4980 3307 3971 4812 * * * 62 30 5600 * 0 * * 0 6544 1122 1000 K 63 3417 6525 * 5650 * 5702 4471 * 2403 4534 6761 * 6666 3890 1758 3107 4514 4754 * * 63 74 4319 * 790 1245 * 0 6544 1958 1000 T 64 5225 6270 * 5082 * 7403 * 6022 1103 * 4925 6267 * 4426 2665 4140 3485 5363 * 5402 64 17 6393 * 1000 1000 * 0 6544 1000 1000 R 65 5011 5386 * 4137 6144 * * 4723 3756 4160 7118 4923 * * 1594 3649 2393 4700 * 5244 65 0 * * * * * 0 6544 0 1000 I 66 * * * * 5814 * * 663 * 2268 5183 * * * * * * 3113 * * 66 15 * 6572 * * * 0 6542 0 1000 I 67 4324 * * 6506 * 5644 6121 3629 3953 4447 6041 3337 * 3049 5244 2799 1809 5435 * * 67 0 * * * * 615 1526 6573 0 1381 P 68 4170 * * 6560 * 5011 * * 3299 4521 * 6117 1045 6306 4363 4765 5640 5729 * 3038 68 0 * * * * * 0 6548 0 1000 R 69 5880 4978 4324 3019 6988 * 5788 5406 3513 6573 * 5165 5324 3075 2004 2914 5789 5496 5833 5714 69 0 * * * * * 0 6548 0 1000 H 70 * * 1795 * 6536 * 910 6310 4985 4504 5803 5369 * 5235 * * 6373 * * * 70 0 * * * * * 0 6548 0 1000 L 71 * 4985 * * 5395 * * 1572 5235 1320 4276 * * 5833 * * * 3158 * * 71 46 * 4985 * * * 0 6548 0 1000 Q 72 3725 5452 4471 5050 5449 7576 3631 6147 2249 4528 5167 4580 * 3613 4014 2691 4049 5580 * * 72 0 * * * * 0 * 6401 0 1361 L 73 4532 4986 * 3716 * 6579 5055 4889 3839 1947 4641 4722 * 3198 4318 3573 3970 4722 5449 * 73 0 * * * * * * 6548 0 0 A 74 596 3726 * 6470 * 6490 5998 * * * * * 5236 * * 3563 4992 3601 * * 74 0 * * * * * * 6548 0 0 I 75 6201 * * * 6361 4986 * 1362 * 4472 3888 5949 6648 * * 7318 5236 1389 * * 75 0 * * * * * * 6548 0 0 R 76 3556 3475 5276 4381 5577 4547 4402 * 3245 3999 * 5325 * 3706 2115 4328 5101 5563 * 4653 76 7 * 7733 * * * * 6451 0 0 N 77 3743 6356 6683 5839 * 4032 6326 * 3243 * 4303 1489 4978 4692 4365 3156 3867 * * * 77 17 * 6442 * * * 0 6446 0 1000 D 78 * * 1131 4884 * * 5851 5113 6513 * * 2422 * 5565 6164 3259 3453 5535 * 6214 78 16 6476 * 1585 585 645 1471 6399 1000 1336 E 79 4985 * 3195 1413 * 5365 * 6301 3612 4302 5438 4567 3367 4669 5325 * 4267 4803 * * 79 0 * * * * * 0 6284 0 1000 E 80 5218 6668 4786 1432 4560 6692 5061 5185 4125 4984 4767 6617 5410 3345 5087 6249 4650 3433 * 6148 80 0 * * * * * 0 6247 0 1000 L 81 * * * * 1788 * 6723 * * 756 6213 * 7679 * * * 6532 5105 6065 4810 81 0 * * * * * 0 6238 0 1000 N 82 4530 5163 1484 6080 * 5213 2986 * 5114 4974 4528 2785 * 5373 6519 3184 6769 * * * 82 0 * * * * * 0 6152 0 1000 K 83 5960 6498 3328 4773 1397 6096 5851 * 4861 6207 4675 5734 6647 2647 5813 3959 4194 * * 6299 83 0 * * * * * 0 6150 0 1000 L 84 6071 * * * 5412 * * 5983 * 270 4009 * * * * * * 4204 * * 84 32 5515 * 1585 585 * 0 6150 1000 1000 L 85 5661 6492 * * 1754 5504 * 2420 * 2034 5905 * * * 4845 4780 * 3328 * 4962 85 29 * 5639 * * * 0 5974 0 1000 G 86 4435 * 2770 4463 * 3210 4288 * 1735 * * 3021 * 4039 4730 4048 5643 * * * 86 84 6148 4553 0 * 410 2016 5956 1000 1457 K 87 4951 * 2515 * 4863 2603 3985 4287 4043 5559 5549 3347 5800 5200 3180 4715 4079 5312 * * 87 42 * 5111 * * 866 1148 5906 0 2008 V 88 4146 5659 * * * 3797 5364 3026 * 4120 * * * * * * 3436 928 5098 * 88 0 * * * * 916 1089 5717 0 1825 T 89 4110 4336 * * * * 4433 2821 * 5002 * * 2283 * * * 1293 4061 * * 89 55 5425 6136 2322 322 * 0 5509 1000 1380 I 90 * 5641 4882 * 5364 4856 * 811 3974 3482 * * * * 4792 5644 * 3213 * * 90 0 * * * * 1887 455 5441 0 1537 A 91 2072 5418 * 4684 * * 3978 * 4932 * * * 2720 5099 5234 1688 3544 * * * 91 0 * * * * 661 1445 5404 0 1380 Q 92 5176 * * 3163 6602 2912 4485 * * * * 4069 5693 1621 4032 2515 * * * 4930 92 67 4460 * 1000 1000 * 0 5415 1000 1000 G 93 5667 * * * * 275 * * * * * * 4880 4615 6307 4417 * 5653 * * 93 54 * 4768 * * * 0 4869 0 1000 G 94 3976 * 5152 * * 454 * * * * * * * 4032 4539 4225 5596 * * * 94 57 5136 6630 2585 263 * 0 4657 1000 1344 V 95 3526 * * * * 5091 * * * * 4298 4152 * * 4831 * 3302 643 * * 95 0 * * * * 1817 482 4614 0 1601 L 96 * * * * 5545 * * 2175 3491 1748 5142 * 5255 3080 * 4507 5251 2972 * * 96 0 * * * * * 0 4576 0 1408 P 97 * * * * * * * * 5255 * * * 232 * * 3033 * * * * 97 48 4932 * 0 * 1048 953 4576 1000 1408 N 98 * 4990 * 3685 3999 * 2468 4775 3110 * * 2865 4472 * 3132 3775 5108 * * 3370 98 0 * * * * * 0 4070 0 1000 I 99 * * * 6029 * * * 546 * 3224 * * 4926 * * 3920 5000 4000 * * 99 0 * * * * * 0 3988 0 1000 Q 100 3554 * * * * * 961 * * 3886 * 3261 * 2359 4867 * * * * * 100 0 * * * * 0 * 3717 0 1000 A 101 3616 4293 * 4051 * * * * 2206 * * * 1348 4736 3429 4347 5795 * * * 101 0 * * * * * * 3797 0 0 V 102 2158 * * 2518 * * * 4604 4762 * * * 4698 5180 * 1669 * 2808 * * 102 0 * * * * * * 3543 0 0 L 103 * * * * * * * 5079 * 116 4387 * * * * * * * * * 103 0 * * * * * * 3222 0 0 L 104 * * * * 3864 * * * * 103 * * * * * * * * * * 104 0 * * * * * * 2977 0 0 P 105 2082 * * * 3780 * * * 3565 4029 * * 1074 * * 3827 * * * * 105 0 * * * * * * 2615 0 0 K 106 * * * * * * * * 441 * * * * * 1924 * * * * * 106 0 * * 0 * * * 2492 0 0 //