HHsearch 1.5 NAME d1t3qa1 FAM FILE d1t3qa1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1t3qa1.a3m DATE Tue Mar 9 06:34:12 2010 LENG 81 match states, 81 columns in multiple alignment FILT 105 out of 357 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.6 EVD 0.4271 0.8750 SEQ >ss_dssp CCSSCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHHCSSCCHHHHHHHGGGSCCSSSCSHHHHHHHTCHHHHHHHHTTCC >sa_dssp EEEEECCADDABEDCEADEECECCEDACECAEEBBEECCDBDDEDADEDBEECEBEDCEDECABCAACBEDABDACEDEDC >ss_pred CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC >ss_conf 955448899999981898888780899999999999489999899999825987647885899999999997313320489 >Consensus xgxxlhpiQxAfxxxxxxQCGfCtpGximsxxxllxxxxxpxxxeIrxalsGnlCRCtgYxxIxxAvxxaaxxxxxxxxev >d1t3qa1 QGEKLNALQDSFRRHHALQCGFCTAGMLATARSILAENPAPSRDEVREVMSGNLCRCTGYETIIDAITDPAVAEAARRGEV >UniRef50_B9JM75(139-217:1499) Xanthine dehydrogenase protein n=3 Tax=cellular organisms RepID=B9JM75_AGRRK E=2e-19 s/c=1.23 id=31% cov=99% -GSHVNPVAYSLATNNGSQCGYCSVGFVMNMSEFIANHPQATKKEIEGIFDGNLCRCTGYRPILTAMETWASDWSAADDE- >UniRef50_C6WK13(83-157:167) (2Fe-2S)-binding domain protein n=5 Tax=Actinomycetales RepID=C6WK13_ACTMD E=1e-15 s/c=1.12 id=30% cov=91% --GGLHPMQRAWLDLDVSQCGYCQPGQIMAAVALVRRVAAEGRAVTDADLDGirNVCRCGAYPRVREAIR--AGGEAMR---- >UniRef50_C6IWL7(85-165:165) Xanthine dehydrogenase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWL7_9BACL E=3e-18 s/c=1.15 id=33% cov=96% EGLARHPefreLEQAMQEYGGVQCGFCTPGMMMSTWAWL-QNPDLFGGDIGAALKNNLCRCTGYRGIIEAAEHVLASKGAVR--- >UniRef50_A1SH62(85-162:972) Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=1 Tax=Nocardioides sp. JS614 RepID=A1SH62_NOCSJ E=3e-22 s/c=1.35 id=33% cov=98% --GELHPIQAAFVESGALQSGYSAGAMVLATQALLARDPDPSEWEIRDAFSGILDRETGYVKVVDAVQRAAALLRGEKPE- >UniRef50_A8UJM0(71-140:446) Xanthine dehydrogenase n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UJM0_9FLAO E=8e-17 s/c=1.26 id=34% cov=86% ---KLTTVQEAMKANYATQCGFCTPGFVVALTGFALSNSENNYSNALDAISGNICRCTGYKAIEKAAHQVVV--------- >UniRef50_Q47LQ3(84-150:165) Carbon monoxide dehydrogenase n=1 Tax=Thermobifida fusca YX RepID=Q47LQ3_THEFY E=6e-11 s/c=1.02 id=34% cov=84% -----HSLQKAFRRH-VRRCTRCRPGLVVAAVELLRGCSSPSEQEIHEGLSGVRCPCGSDADIVRAVCEAADA-------- >UniRef50_C8PLX5(82-158:159) Iron-sulfur cluster-binding protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PLX5_9SPIO E=3e-15 s/c=1.08 id=29% cov=96% ---EYNDIIAAFDKEGITLCGFCSAGTILTAHSIVQKHWNPTDEQIRDAYIGIMCRCTDIVSITAALKQVCRSKRSKRHE- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * Q 1 * * * 996 * * 4109 * 2688 * * * * 2141 4086 * * * * * 1 0 * * * * * * 3294 0 0 G 2 3984 * 2721 * * 733 * * * * * 3161 4862 4749 * * * * * * 2 0 * * * * * * 3839 0 0 E 3 6102 * 2297 2168 * 1090 * * * 4849 * * * * * 4499 6542 * * * 3 0 * * * * * * 4370 0 0 K 4 2897 * 6556 2014 * 3607 5094 6339 3037 * * 4693 5971 3667 3480 5405 3278 * * 6341 4 0 * * * * * * 4560 0 0 L 5 6182 * * * 4311 6510 * 5018 * 596 5011 * 3927 6563 5852 * * 4685 6758 4068 5 33 6160 6805 0 * * * 4655 1000 0 N 6 5416 * 3985 5650 * 5145 965 * 5165 * * 3060 * * * 2415 5831 * * * 6 0 * * * * * 0 4675 0 1000 A 7 3059 * 4562 4998 * 6637 * 4211 4716 4278 * 6580 899 6407 4396 5015 * 5990 * * 7 21 6107 * 2000 415 * 0 4708 1000 1000 L 8 6531 * * * * * * 1707 * 1567 5654 * * 6597 * * * 1666 * * 8 0 * * * * 0 * 4725 0 1000 Q 9 4527 * * 5125 * 7282 5655 5658 4671 * 6749 * * 441 4105 6693 * 5112 * * 9 0 * * * * * * 4725 0 0 D 10 2586 * 4880 2054 * * 6087 * 2969 7071 * 5132 * 2104 3653 6053 6037 6362 * 5274 10 0 * * * * * * 4725 0 0 S 11 486 5242 * * * 4387 * * 5511 6480 7248 * * * 4049 3424 * 5753 * * 11 9 7350 * 2000 415 * * 4741 1000 0 F 12 * * * * 754 * * 5963 * 2666 3081 * * * * * * 4642 3733 * 12 0 * * * * * * 4741 0 0 R 13 2591 * 4493 6200 * * 6823 2980 6060 2334 5976 6321 * 5476 3431 4866 6797 2057 * * 13 0 * * * * * * 4741 0 0 R 14 2995 * 2304 1755 * 5706 6792 * 3780 7115 * 6722 * 3092 3375 6862 5202 6850 * * 14 0 * * * * * * 4741 0 0 H 15 3435 3316 * 2570 4728 4913 2108 * 5690 5443 5989 3364 * 5703 6254 3877 5833 4523 7446 6222 15 41 * 5173 * * * * 4741 0 0 H 16 4668 6539 3168 * 4358 1702 2147 * 6580 5633 * 3763 * 3400 6399 6472 * * * 4851 16 0 * * * * 0 * 4695 0 1000 A 17 1190 * * * * 1492 * 4835 * 7051 * * * * * 6538 * 2709 * * 17 0 * * * * * * 4741 0 0 L 18 3847 * 5697 5600 3120 6684 * 6814 * 2534 4552 * 4526 6725 5173 2639 3202 2436 * 7128 18 0 * * * * * * 4741 0 0 Q 19 * * * * 5839 * * * * 5831 5600 * 5783 154 5173 * * * * * 19 0 * * * * * * 4741 0 0 C 20 * 90 * * * * * * * * * * * * * 4048 * * * * 20 0 * * * * * * 4741 0 0 G 21 * * * 5302 * 79 * * * * * * * * * * 5173 * * * 21 0 * * * * * * 4741 0 0 F 22 * * * * 969 * * 5237 * * 6213 * * * 5173 * * * * 1246 22 0 * * * * * * 4741 0 0 C 23 * 129 * * * * * * * * * 4863 * * * 5260 * 5302 * * 23 0 * * * * * * 4741 0 0 T 24 3744 * 3787 * 6213 5302 * 4198 * 6735 7191 * * 4201 5173 3459 851 5959 * * 24 0 * * * * * * 4741 0 0 A 25 3374 * * * 6568 4725 5506 * * * * 5303 554 * * 3253 6740 6323 * * 25 0 * * * * * * 4741 0 0 G 26 3510 * * 7043 * 203 * * * * * * * * * 6592 * 5302 * * 26 0 * * * * * * 4741 0 0 M 27 4523 * * * 1964 * * 3581 4714 3775 1490 * * 3814 * 5302 5185 5743 * 7158 27 0 * * * * * * 4741 0 0 L 28 3931 5715 * * * * * 1847 * 2635 3499 * * * * 4992 5093 1611 * * 28 0 * * * * * * 4741 0 0 A 29 5634 4986 * * 5600 * 6573 3655 * 2153 1300 5760 * * * * 5766 2556 * * 29 27 7043 6510 2322 322 * * 4741 1000 0 T 30 1797 * * 5981 5596 6898 * 4857 5779 * 6408 4671 * 6717 5508 1698 2433 4690 * * 30 0 * * * * * 0 4729 0 1000 A 31 1320 6069 * * * * * 3057 * 2671 3295 * * * * 4618 2940 4861 * * 31 0 * * * * * 0 4729 0 1000 R 32 2892 * 7694 4693 4490 7051 4574 4265 3047 5140 * 7071 * 4969 5138 3947 2523 3549 5471 3160 32 12 * 6939 * * 0 * 4729 0 1000 S 33 1289 6827 2980 3370 * 3394 4661 * 6208 * * 6737 5951 * * 3084 5348 5799 7230 5809 33 23 * 5989 * * 0 * 4743 0 1000 I 34 4488 6463 * * 3569 6052 * 3998 * 614 4542 * * * * * * 6095 6165 4124 34 16 6503 * 1585 585 0 * 4740 1000 1498 L 35 4729 6555 6997 6655 4329 * 4563 4329 6740 616 7001 * * * 6490 * * 3659 6747 5446 35 57 5831 5555 585 1585 * * 4741 1538 0 A 36 2818 * 2286 3074 * * 5814 * 4657 5406 5238 3896 * 3460 2127 5201 6300 * * * 36 25 5891 * 3345 149 0 * 4721 1555 1567 E 37 4314 6655 3939 3247 * 4043 4540 6726 2728 * 6814 3578 * 3711 2020 4311 4670 * * * 37 73 4339 * 2835 218 * * 4741 2539 0 N 38 5435 4344 3606 4410 * 3375 2714 4497 4342 6332 * 1704 * 4574 5225 6099 5417 5409 * 7278 38 42 5589 6986 1585 585 * * 4741 1000 0 P 39 3045 * 4731 4229 * 4158 5580 6977 4438 * 6839 6813 1187 5887 4968 3618 4509 6909 5827 * 39 53 4798 * 975 1025 * 0 4735 2249 1000 A 40 2952 6472 2614 3921 6793 5091 4175 5444 4585 4811 * 3094 7049 3600 4136 3718 4550 4226 * * 40 52 5252 6721 1904 448 * 0 4735 1759 1000 P 41 3138 7149 6885 4740 6834 6877 * 6670 5804 3797 6971 * 717 * 4457 5927 5901 6232 * 6940 41 19 6293 * 1482 639 939 1064 4734 1564 1524 S 42 5127 * 2435 6101 6168 4225 * * 6792 5423 * 4833 6845 * 6724 1759 1628 * * * 42 16 * 6520 * * 0 * 4735 0 1000 R 43 3619 * 2518 2048 6472 6192 5527 * 5430 5794 4431 6310 5167 5600 2002 6061 * 5044 * 6391 43 12 6866 * 0 * 0 * 4731 1000 1000 D 44 2320 * 2298 1652 * 4727 7049 * 4661 5851 * 7186 7058 4272 5659 4392 5952 * 5249 * 44 27 6734 6802 2322 322 * * 4737 1000 0 E 45 3734 * 2308 1066 * 6557 6969 * 4292 * 5847 6536 * 3693 6317 6046 4999 6498 * * 45 51 4858 * 818 1209 * 0 4735 1659 1000 V 46 3910 * * * 6557 6052 * 772 * 3878 * * 6491 * * * 5179 2214 * * 46 16 6521 * 2000 415 0 * 4735 1000 1000 R 47 4088 * 4035 3070 * 6195 4085 6551 3112 4388 * 6980 * 5917 1182 6802 5470 7211 6506 * 47 0 * * * * * * 4737 0 0 E 48 3497 * 2657 1525 7151 6298 4178 * 3317 6317 * 5186 * 5249 3867 4523 4866 6848 * 6823 48 22 6061 * 0 * * * 4735 1000 0 V 49 820 * 6496 5690 6663 3673 5131 6298 * 5879 6559 5701 * 4863 5113 4672 * 7104 3987 4210 49 16 6504 * 1585 585 * * 4735 1000 0 M 50 * * * * 3180 * * 2861 * 908 3076 * * * * 5498 6061 5315 * 4701 50 30 6483 6786 2322 322 * * 4735 1000 0 S 51 2772 5298 3331 4677 * 3778 * 4640 5002 * * 4909 * 4900 5247 1340 4688 5757 * * 51 11 * 7022 * * 0 * 4727 0 1000 G 52 6263 * 7200 * * 332 * * 4765 * * 6181 5457 * 5478 3773 * 7085 * 6719 52 27 5741 * 1000 1000 0 * 4739 1572 1000 N 53 * * * * * * 3842 4503 * 4235 5830 533 * 6850 * * 4551 3775 * * 53 0 * * * * * * 4735 0 0 L 54 5203 * * * 4853 * * 2398 * 720 4445 * * 5830 5171 * 6708 5079 * 6514 54 0 * * * * * * 4735 0 0 C 55 * 91 5246 * * * * * * * * * * * * 4853 * * * * 55 0 * * * * * * 4735 0 0 R 56 * 5202 * * * * * * * * * * 5171 * 101 * * 6288 * * 56 0 * * * * * * 4735 0 0 C 57 * 91 4853 5246 * * * * * * * * * * * * * * * * 57 0 * * * * * * 4735 0 0 T 58 4085 * * * * 2314 * 6514 * * 6617 * * 6477 * 5129 558 * * * 58 0 * * * * * * 4735 0 0 G 59 4183 * 4425 5756 * 592 * * * * * 6288 * * * 3017 3642 * * * 59 0 * * * * * * 4735 0 0 Y 60 * * 5171 * 5595 * 4334 4823 * * * * * * * 5756 * * 4853 298 60 0 * * * * * * 4735 0 0 E 61 3973 * 4890 3028 6309 3958 4951 6786 4871 5275 6015 4555 4023 3161 2328 * 4546 3222 * 5565 61 0 * * * * * * 4735 0 0 T 62 4502 * 4360 5870 * 3355 5374 * 2913 6203 5579 3329 2660 3641 2781 3559 5577 * * 6405 62 0 * * * * * * 4725 0 0 I 63 * * * * 5865 * * 514 * 4454 6857 * 7200 5687 * 6725 * 3210 5719 3926 63 0 * * * * * * 4725 0 0 I 64 5123 * * 5162 4295 * 6452 2442 4991 2582 5082 * * 6610 3862 6725 5813 1810 6924 3850 64 0 * * * * * * 4725 0 0 D 65 2911 * 2264 2438 * * * 6507 4016 * * 4832 * 3698 2399 5072 3999 7068 * * 65 0 * * * * * * 4725 0 0 A 66 280 * * * * 3866 * * * 6257 * * * * * 4357 * 4441 * * 66 16 6543 * 1585 585 * * 4725 1000 0 I 67 3579 5646 * * 5529 5270 * 1846 * 3502 4940 * * * * * 6149 1228 * 6830 67 9 * 7323 * * * * 4716 0 0 T 68 3547 5150 5046 2539 * 5690 5236 7085 2551 4009 5075 * * 3000 2883 5094 6091 4468 6761 6728 68 17 * 6425 * * * 0 4717 0 1000 D 69 4271 * 3583 2694 * 4389 5432 6426 3964 3763 * 4834 * 3513 2559 3159 3857 * 6805 7021 69 37 5672 7482 1738 514 * 0 4696 1587 1566 P 70 1087 * * 6796 3818 5551 * 4771 * 3087 * * 5717 6863 * 6208 5822 2549 6211 5036 70 12 * 6908 * * 580 1595 4700 0 1882 A 71 829 3832 * * * 4650 6484 5871 * 3808 * * * 5569 6665 3425 4634 4299 * 6371 71 37 6687 5980 2000 415 1000 1000 4710 1000 1480 V 72 2411 5528 3942 3054 * 3850 * * 2869 4654 * * * 4757 3164 3227 6875 3398 * * 72 21 6128 * 1000 1000 1000 1000 4706 1000 1494 A 73 2684 * 3105 4460 * 3398 6421 4333 3941 3592 * 3975 5368 4697 3644 3811 4482 4363 * 7039 73 0 * * * * 0 * 4683 0 1000 E 74 4138 * 6326 2636 6058 6836 6504 5531 2747 3437 3510 6329 6294 3582 2529 5020 5047 5525 5672 * 74 0 * * * * * * 4608 0 0 A 75 1759 5237 5032 * 4693 2678 * 5877 4526 4573 * 5931 * 5129 2459 4172 4898 6316 * 5523 75 0 * * * * * * 4410 0 0 A 76 2374 4323 4834 3540 * 2151 5830 5800 4270 * 4152 6595 3588 * * 3841 5097 3740 * * 76 0 * * * * * * 4426 0 0 R 77 3435 * 6374 2318 * 3947 * * 3235 3266 * * * 3338 1887 6090 * 4797 * * 77 0 * * * * * * 4379 0 0 R 78 5681 * 4351 2781 * 4781 * 5642 2698 * 5666 5449 * 4833 1448 3142 * 5795 * * 78 0 * * * * * * 4327 0 0 G 79 2066 * 4657 * * 1023 4209 * 4649 * * 5276 3581 * * 5264 * * * * 79 0 * * * * * * 4124 0 0 E 80 3721 * 2742 707 * 3922 * * * * * * * 3934 5026 * * * * * 80 0 * * * * * * 3947 0 0 V 81 * * * * * * * 3311 * 3092 * * * * * * * 355 * * 81 0 * * 0 * * * 2909 0 0 //