HHsearch 1.5 NAME d1t15a2 FAM FILE d1t15a2 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1t15a2.a3m DATE Tue Mar 9 01:23:05 2010 LENG 102 match states, 102 columns in multiple alignment FILT 114 out of 440 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 8.7 EVD 0.4661 1.3923 SEQ >ss_dssp CCTTTTCEEEECSCCSSSCHHHHHHHHHHTTCEECCSGGGCCCSTTCCEEEEECGGGCSSCGGGGSSTTTCSSCEEEHHHHHHHHHHTSCCCSGGGBCCC CC >sa_dssp EDCAEECBAABCDDCDECEDEDABECADDBDBDCBEEBEDBDEEEECECBAAABCECCEECDDCCCACEEBECDAACBDAACDACEEDEDCECEEBDBEC EE >ss_pred CCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCCCCCCCCC CC >ss_conf 9343896999906898748899999999837999203100124566530131046542103579999973698496499999999828816840004457 98 >Consensus xkiFxgxxixxxGxxxxxxxxxLxxlIxxxGGxxxxxxxxxxxxxxxtxxivxxxxxxxxxxxxxxxaxxxxixiVxxxWixDsixxxxxxpxxxYlixx xx >d1t15a2 RKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFTLGTGVHPIVVVQPDAWTEDNGFHAIGQMCEAPVVTREWVLDSVALYQCQELDTYLIPQ IP >UniRef50_UPI000186DC30(439-551:557) BRCA1-associated RING domain protein, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186DC30 E=9e-05 s/c=0.43 id=9% cov=42% --------------------------------------------------IIYQSEKWNPQPKYN----MSHMKTLPFDWLVSCIYYFELIDPKNF---- -- >UniRef50_D1ZR51(457-546:1016) Whole genome shotgun sequence assembly, scaffold_84 n=1 Tax=Sordaria macrospora RepID=D1ZR51_SORMA E=2e-05 s/c=0.56 id=17% cov=51% --------------------------------------------------VLVAPSMSVIRKQKLEMALRWKVPIVRAEWLWRCITTGFKCPIEDFLFPE L- >UniRef50_Q54PM4(90-188:328) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54PM4_DICDI E=3e-08 s/c=0.60 id=18% cov=94% -KIFEGIKVYFDGLSGEVSTLHLKKLIFLNGGTTSHWFsPTEVTHIVGTHMSLNKFETVKRMGVNTSRIRNGKiIHYVSSDWILDSCRLLKLQNESKY-- ---- >UniRef50_B3L4N0(350-442:598) Pescadillo-like protein n=2 Tax=Plasmodium (Plasmodium) RepID=B3L4N0_PLAKH E=0.0003 s/c=0.50 id=18% cov=78% ---------------TDMPLDILSLIILSSGGAIGWNSPYSPYQREDERITheILEPYGEAKQMGQEKIERMY----VQPQYIFDCLNRKKILPCSDYSV ---- >UniRef50_Q6ATS1(640-743:883) Os03g0811200 protein n=3 Tax=Oryza sativa RepID=Q6ATS1_ORYSJ E=5e-10 s/c=0.63 id=17% cov=97% --LFHGLDFLLTG-FQSHKEKEIEPLIRKFGGYVLSRVPSCPLDKRSKLAELARckppivLSPKKVSTAKFLYGCAINSWILNPSWLFDSIQAGVMLPPG KYFIRQV- >UniRef50_A3LN41(123-219:846) Regulator of Ty1 Transposition n=1 Tax=Pichia stipitis RepID=A3LN41_PICST E=1e-08 s/c=0.62 id=16% cov=96% ---FKDCFVCVADNLPVGDKEAIYAGVKAFGGCYLDVLTKYTTHLIAHDLSNEKSIIASSAINNSADGEGIDIKIVLPHWIDHCITLGRRIDETTYLLPD -- >UniRef50_Q75JA4(432-523:782) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q75JA4_DICDI E=9e-06 s/c=0.56 id=18% cov=88% KDILKGTYIVFSGVYplgTPIQKQPLRWLAEEFGSVVQNDINN----------ETTHVIAQRKGTSKVNKALSKGLKVISPQWLIESTRIWQMADEDDFS LP--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * R 1 * * * 4210 * * * * 1837 * * * * 1886 1338 * * * * * 1 0 * * * * * * 6291 0 0 K 2 * * 5446 * * 5141 * * 785 * * 3955 4396 2937 3807 * 4200 * * * 2 0 * * * * * * 7537 0 0 I 3 * * * * 5930 5742 * 1551 * 1249 * * 4343 * * * 5882 2870 * * 3 0 * * * * * * 8024 0 0 F 4 * * * * 403 * * * * 2284 4696 * * * * * * * * * 4 13 * 6806 * * * * 8449 0 0 R 5 4363 5865 2853 2772 5064 * 4398 * 2544 6457 * 3771 * 4274 3554 2914 5703 6388 * 6034 5 0 * * * * * 0 8451 0 1000 G 6 * * 2603 6227 * 729 * * 6493 * * 2742 * * * 4670 * * * 5724 6 0 * * * * * 0 8451 0 1000 L 7 5039 2700 * * 4218 6477 5197 3508 5726 1541 4187 * * 4709 5353 * 6220 3939 * 3706 7 0 * * * * * 0 8452 0 1000 E 8 * 6020 6143 4221 4253 4673 5473 5309 3128 4840 * 2906 5433 5169 3416 3634 3118 3521 * 3893 8 0 * * * * 0 * 8452 0 1000 I 9 5876 6280 * 5728 1936 * * 1111 * 5319 * * * * * * * 2308 * * 9 15 * 6610 * * * * 8450 0 0 C 10 3392 1358 * * 3865 7215 5456 4405 * 4102 4790 * * * * 4700 4962 5339 * 2476 10 0 * * * * 0 * 8441 0 1000 C 11 6035 3236 * * 2283 * * 2533 * 2103 * * * * * 4538 5057 2547 * 5414 11 27 * 5763 * * * * 8463 0 0 Y 12 4024 4692 4917 * 5420 6144 6427 4462 * 3785 * 3346 6007 * * 1837 2559 3685 6086 4513 12 26 6697 6955 0 * 0 * 8414 1000 1000 G 13 5679 6001 4412 * * 530 * * 5857 * * 6426 * 5026 3896 3650 5730 * * * 13 441 * 1925 * * 0 * 8470 0 1000 P 14 5567 * 4761 3720 5289 4170 5335 3526 4862 3187 * 3771 3294 4914 * 4251 2602 4863 * 3852 14 118 * 3675 * * 172 3151 8193 0 5924 F 15 6259 * 6397 4938 1187 * * 3893 6387 2642 5138 * 4712 * * 4025 4545 * * 3425 15 79 4638 6271 1585 585 949 1053 8358 2020 3877 T 16 4739 * 4449 4585 6051 4256 4386 * 4118 4333 5991 4023 4033 4696 * 2449 1984 5315 * 6080 16 48 4947 * 923 1082 0 * 8431 1699 2844 N 17 4920 5593 3182 3602 * 2830 5165 6420 3041 6041 5280 3319 3126 4240 6372 3703 6817 4453 * * 17 68 * 4436 * * * * 8510 0 0 M 18 4322 * 4016 3638 4746 5321 3882 3463 6086 5348 4170 5567 2490 4144 6353 5270 3559 3422 * 5629 18 54 5354 6318 1585 585 0 * 8475 1650 2545 P 19 5284 * 3144 2689 6822 4561 6135 5276 3573 6325 * 5095 3005 4111 5701 3335 3085 6063 5067 5279 19 32 6415 6572 1585 585 0 * 8497 1000 1000 T 20 4144 5638 5004 4023 * * 6466 * 2059 3040 * * * 4924 1931 3946 4171 5386 * 5765 20 46 5009 * 0 * 0 * 8813 1821 1000 D 21 3108 * 2541 2318 * 5384 * 4720 3495 3859 6553 4630 * 3438 6082 3444 5045 6394 * * 21 31 5556 * 0 * * * 8858 1158 0 Q 22 5302 * 3247 2199 6726 6590 2735 5355 3579 * 5419 4371 5372 2428 6560 6825 5328 5213 * 5610 22 20 6174 * 0 * * * 8858 1000 0 L 23 6553 * * * 5477 * * 1927 * 877 3824 * * * * * * 3493 * * 23 0 * * * * * * 9016 0 0 E 24 5928 6835 5910 2457 * 6498 6056 4005 2174 5323 4306 5214 * 4391 3497 3323 5078 3868 * 5089 24 0 * * * * * * 9016 0 0 W 25 4192 * 4743 2598 6395 5139 3839 4508 2061 5940 * 4482 6304 4597 2992 4406 5556 * 4649 * 25 0 * * * * * * 8970 0 0 M 26 5283 5097 6528 5508 6305 5919 6067 3305 4718 1132 3404 6647 * 5521 * 5923 4830 4963 3994 * 26 0 * * * * * * 8987 0 0 V 27 3973 5580 * * * * * 1038 * 3350 5665 * * * * * 5015 1838 * * 27 0 * * * * * * 8987 0 0 Q 28 4614 * * 2105 5466 * 4695 4728 2691 4281 6505 3901 * 4580 3839 4164 3231 3845 * * 28 0 * * * * * * 8987 0 0 L 29 2542 * 4839 3189 6347 6361 6721 4289 4348 2749 6613 4761 * 3484 4542 3247 4064 4814 * 5596 29 0 * * * * * * 8987 0 0 C 30 3909 2773 * 7073 3292 3510 3421 5889 * 3000 4242 2912 * 6647 5012 4071 6445 5119 * 5151 30 0 * * * * * * 8987 0 0 G 31 5543 6341 * * * 90 * * * * * 5823 * 6759 * * * * * * 31 0 * * * * * * 8987 0 0 A 32 2135 * * * 5823 456 * * * * * * * * * 6374 * 6219 * * 32 29 * 5633 * * * * 8987 0 0 S 33 5968 5905 7043 3496 6922 * 5012 4203 2425 * 6836 5180 * 4113 2596 4326 2227 4164 * 6300 33 61 * 4588 * * * 0 8965 0 1635 V 34 * 5567 * 5828 2879 * * 2134 * 4746 * * 5771 * * 5352 5278 1790 * 2304 34 81 6501 4514 1000 1000 * 0 8918 1000 3243 V 35 4820 4450 6383 5159 5400 5867 4612 5971 4565 2510 6641 5495 6209 3871 4766 2659 2912 3208 * 6240 35 39 * 5237 * * 3016 190 8945 0 4341 K 36 3959 * 2894 3313 * 5106 4033 6464 3083 5142 * 3905 4599 5351 3669 2977 4367 * 4575 5372 36 48 * 4920 * * * 0 8860 0 4721 E 37 3705 6316 3147 4369 * * 4402 * 4647 * * 5076 * 3064 2960 2414 3374 4273 6253 4814 37 97 4880 4994 2494 282 2361 312 8833 1664 5018 L 38 6187 * * * 2724 * 6339 3984 4535 1656 4127 * 3360 * 5743 4978 6141 2718 * 5171 38 162 5166 3674 639 1482 1948 433 8838 1696 5181 S 39 5645 * 3806 3274 6285 * 4057 4258 3536 * * 4431 2930 4742 4135 3134 2664 5353 5277 * 39 122 * 3623 * * 3680 117 8910 0 5469 S 40 5222 * 3395 3134 4412 6271 * 5560 2170 4858 6432 3120 6450 4549 4698 2931 5285 5947 * 4870 40 192 * 3008 * * 2868 213 8875 0 6036 F 41 3171 4358 4040 6172 3444 * * * 3352 2268 * 3955 4956 5418 5974 4033 4714 4218 * 3660 41 44 * 5050 * * 3037 187 8792 0 6550 T 42 4101 5841 3282 4559 6338 4922 * 5236 6414 4104 5844 5860 3875 3241 6050 3345 2568 3240 * 4621 42 82 * 4184 * * 2288 330 8796 0 6246 L 43 4194 * 5811 4944 6990 3370 4170 5441 4459 4354 * 3139 6121 5875 * 2440 2651 3882 * 4026 43 106 * 3821 * * 1962 428 8769 0 6083 G 44 4556 6531 2542 4038 * 5925 2903 * 3484 6182 5184 * 4455 3988 4140 3233 5612 3631 * 4049 44 16 * 6534 * * 2140 371 8726 0 6049 T 45 4131 * * 5055 4900 5118 5708 3796 3249 2953 * 4780 3920 4048 3107 4307 3539 3402 * 6067 45 15 * 6595 * * 1440 663 8827 0 5677 G 46 6264 * 4601 3275 * 3826 * 4072 3113 6119 * 3630 5034 4941 3930 3478 2961 2947 * 5306 46 74 5352 5302 1169 849 2220 349 8766 1624 4739 V 47 3833 3079 3945 4709 * 4050 6299 4072 4971 3423 * 4981 5387 3800 6792 3200 3684 2970 * * 47 61 6299 5117 1585 585 2061 395 8777 1000 4811 H 48 5435 * 5251 4422 * * 4014 4807 2895 * * * 5071 6791 * 4400 964 5289 * 4395 48 70 6124 4916 0 * * 0 8710 1000 4938 P 49 4422 3865 4871 5378 6687 6383 1594 4321 3538 4047 * 5988 4258 5873 4295 3470 5157 5857 * 7543 49 87 4090 * 2991 194 2136 372 8651 2943 5292 I 50 6103 4887 * 4715 5089 * 6820 2902 6883 1531 4494 5288 4907 * * 3941 5117 3205 * 3617 50 34 * 5409 * * 1371 705 8678 0 4697 V 51 5440 5429 6201 4083 3710 * * 1723 * 3463 4517 * 6186 * * 3900 4742 2004 * * 51 43 5923 6303 1000 1000 1535 611 8821 1000 4037 V 52 3246 4143 * * 5760 5945 * 2186 * 2832 5548 4751 * * * 6076 4224 1660 * * 52 34 * 5422 * * * 0 9170 0 3508 V 53 3083 4459 4433 4694 4234 4369 * 3080 4963 5033 * 4169 5998 5654 5494 3692 3297 3486 * 3514 53 31 6232 6943 3170 170 * 0 9130 1000 4135 Q 54 3470 6193 3189 4426 * 4019 3084 * 3221 * * 4520 6256 3707 4190 2906 3538 5061 * 5997 54 54 5079 7087 2209 352 2999 193 9128 1665 4375 P 55 4405 * 3798 4113 4652 3862 * 5086 2963 3535 7119 4234 2281 6282 4908 3591 4903 5213 * 6065 55 34 6181 6767 0 * 1999 415 9166 1000 4118 D 56 5319 * 3132 2206 5739 3307 5115 4576 5018 3250 * 4620 4726 4670 * 3712 3957 5129 * 5033 56 24 * 5931 * * 1197 827 9158 0 3670 A 57 2887 6375 4913 4396 4686 3442 5103 4635 5598 5327 * 3679 3719 5523 6263 2518 4282 3999 * 4352 57 15 * 6640 * * 1436 665 9162 0 3347 W 58 3652 4337 2957 3485 6759 3756 * 6190 4166 4683 6637 5093 3898 4840 4336 4206 5106 3774 3923 4373 58 12 * 6905 * * 1272 771 9176 0 2827 T 59 4336 * * 4518 6559 * * 3713 1730 * 5872 4665 * 4720 2565 2989 3771 4958 5403 * 59 86 5118 5089 2919 205 525 1713 9304 1666 2666 E 60 3676 * 3356 4086 * 3916 5623 5134 2142 4735 6214 4937 4510 6673 3804 3992 3707 4493 6931 5472 60 89 4825 5358 3696 116 * 0 9230 2363 3109 D 61 4621 5987 4143 2975 5264 4054 5519 5067 4039 4143 4832 4439 4748 2814 3929 3632 4027 5173 * 6885 61 62 6149 5166 0 * * 0 9230 1000 3934 N 62 3329 * 5472 3688 5583 3845 5319 5674 2451 4958 4787 3390 5327 4727 4706 3750 3285 6484 * 5083 62 94 6087 4374 4954 47 3231 162 9196 1000 4451 G 63 3563 5963 3860 2740 3776 5196 6055 4912 3538 2877 * 4179 * 6463 * 3833 4347 4320 * 3754 63 91 * 4033 * * 2241 343 9186 0 5126 F 64 3686 5365 4828 4838 4194 5223 4812 3549 2266 4365 6483 4229 * 5955 4017 4944 5394 4246 * 3088 64 82 5970 4673 3700 115 3202 166 9192 1000 5373 H 65 4864 * * 4643 4604 5568 6435 3699 2406 3219 6250 4098 4234 3041 3526 5547 4948 5408 * 3870 65 68 * 4435 * * 2229 346 9057 0 5587 A 66 2566 5955 6562 2726 * 6418 * * 2982 5260 * 4217 * 3801 3231 3270 3744 5406 6048 4646 66 52 * 4812 * * 1638 559 9091 0 5533 I 67 2857 5702 5560 4530 5596 5868 3483 3010 3779 3083 5974 * * 6615 3937 * 4131 3455 * 3375 67 49 5906 5915 1000 1000 1364 709 9022 1000 5290 G 68 1016 * * 4263 * 3978 6418 3451 4356 * * 5850 6242 * 5127 4287 5271 3903 * 4838 68 49 * 4914 * * 2143 370 9139 0 4635 Q 69 4104 6457 5115 4033 5797 * * 5095 2146 3291 5404 4347 6166 4205 2145 4582 5042 5265 * * 69 39 * 5226 * * 2140 371 9140 0 4656 M 70 4050 * 3657 3393 5508 3843 6218 6783 3301 4095 4327 4129 4793 3986 2960 3611 6330 5092 6688 5443 70 57 * 4680 * * 1218 811 9129 0 4553 C 71 4183 4697 4690 6209 5889 3278 6764 4702 3075 3852 5189 3908 3932 5385 6422 4856 5397 5966 2974 3293 71 72 6663 4686 1585 585 1179 841 9121 1000 4453 E 72 6475 * 4313 4579 7010 1777 3875 * 2471 * 7013 2146 * 6719 4697 5343 6149 5146 * * 72 29 5630 * 0 * 3161 171 9055 1084 4141 A 73 3564 4364 * * 6518 7001 6210 1810 3830 2529 6421 * * * 6488 4696 * 2263 * 4790 73 0 * * * * 2962 198 9064 0 3976 P 74 5853 * 4225 4079 5468 * 4120 4766 2329 5185 * 6614 1924 4012 4234 5902 4297 * 4490 5282 74 0 * * * * 948 1054 9088 0 3790 V 75 4220 3063 * * 4650 * * 1720 5999 4600 5330 * 6320 * * 6281 4155 1770 * 5219 75 0 * * * * 371 2142 9136 0 2444 V 76 4074 * * * 6069 * * 2979 * 2662 * * * * * * * 642 * * 76 0 * * * * 0 * 9188 0 1000 T 77 6786 * 5154 6282 * 4582 5001 5006 3139 5041 5765 3496 4342 5066 4135 1906 2475 * * 6344 77 0 * * * * * * 9178 0 0 R 78 3925 * * 3437 4334 5446 4199 5679 * 3555 6129 5215 1747 5853 5089 3070 5719 3960 6268 6780 78 0 * * * * * * 9178 0 0 E 79 3560 * 2435 2314 * 4790 4787 * 3689 4223 6514 3946 * 3541 4901 3672 4653 6342 * * 79 0 * * * * * * 9178 0 0 W 80 * * * * 3974 * * * * * * * * * 5765 5765 * * 195 5265 80 0 * * * * * * 9178 0 0 V 81 6214 * * * 3701 * * 1633 * 1405 * * * * * * * 2255 * * 81 0 * * * * * * 9178 0 0 L 82 6581 * 4992 3266 2589 * 5205 3473 6847 2401 4785 5594 * 4645 5668 * 4172 3701 3594 4609 82 0 * * * * * * 9178 0 0 D 83 4121 * 777 2910 * * 5751 5724 4958 * * 4746 * 4019 6773 4844 6228 * * * 83 0 * * * * * * 9178 0 0 S 84 4276 1132 * * * * * 5872 * * * * * * * 1164 6108 6136 * * 84 0 * * * * * * 9178 0 0 V 85 4102 5774 * * 5484 6643 4945 1276 * 2878 6489 * * * 6896 5111 6606 2446 4964 4820 85 0 * * * * * * 9198 0 0 A 86 2476 * 3941 4396 6798 5456 7061 6307 2819 6596 4817 3969 * 3905 3622 3232 3580 4673 * 5199 86 0 * * * * * * 8927 0 0 L 87 2515 * * 3646 * * 5853 6253 3428 3254 5507 4760 * 2772 3811 2877 4536 4798 * 5305 87 0 * * * * * * 8927 0 0 Y 88 4200 5455 7903 5271 3915 1828 4330 * 3067 4763 6440 4044 5971 4752 3983 5813 * * 3890 3938 88 0 * * * * * * 8893 0 0 Q 89 4266 6220 * 2768 6758 * * 5849 1955 5663 4825 * * 3488 2769 3816 3627 4790 * 5360 89 0 * * * * * * 8884 0 0 C 90 4227 3694 * * * * * 2711 4180 1603 4737 * * * 2698 5163 6408 3309 * * 90 0 * * * * * * 8884 0 0 Q 91 4184 6097 * 6278 5291 * 6121 4306 5279 1340 4741 * * 2297 4551 * 6020 3221 * * 91 0 * * * * * * 8513 0 0 E 92 5821 6114 1987 4924 * * * * 5976 6255 * 3740 1043 * * 3852 5359 * * * 92 0 * * * * * * 8513 0 0 L 93 5471 4657 * 1979 2618 * 4744 4195 6084 3507 4765 * 4257 * 6063 * 3432 4165 4931 4594 93 0 * * * * * * 8518 0 0 D 94 5064 * 2455 2898 * 6047 * * 2620 6415 * 4696 * 3476 3813 2938 3304 4928 * * 94 0 * * * * * * 8478 0 0 T 95 4189 6587 2694 3882 * 3946 * * 3183 4241 * 2603 2921 4870 4363 6201 4027 5045 * * 95 0 * * * * * * 8419 0 0 Y 96 * * * * 3473 * * 5585 * * * * * * * * * * * 170 96 76 4285 * 302 2406 * * 8389 2136 0 L 97 5790 5695 5937 6326 4761 * 5839 4022 6617 884 6144 * 5469 5151 5540 4069 4801 3573 * * 97 0 * * * * * * 7965 0 0 I 98 * * * * 4665 * 5300 1569 * 1595 * * * * * * * 1905 * * 98 0 * * * * * * 8062 0 0 P 99 * * * 3322 * 3821 5653 * 4844 * * * 1079 4906 4350 2458 4764 * * * 99 0 * * * * * * 7489 0 0 Q 100 * * 2744 2697 * * * * 3164 * * 2784 * 2006 3787 3081 * * * * 100 0 * * * * * * 6659 0 0 I 101 * * * * * * * 1998 * 1607 * 3443 * * * 3797 * 1958 * * 101 0 * * * * * * 5058 0 0 P 102 * * * * * * * * * * * * 0 * * * * * * * 102 0 * * 0 * * * 3466 0 0 //