HHsearch 1.5 NAME d1sxma_ FAM FILE d1sxma_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1sxma_.a3m DATE Wed Mar 10 22:58:12 2010 LENG 39 match states, 39 columns in multiple alignment FILT 2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.2 EVD 0.5100 3.5731 SEQ >ss_dssp CBCCCCCSSTTSSTTTHHHHSTTCCCEEEETTEEEECCC >sa_dssp EECEDEBECDEDACEBADEECEEDABCDCEECDACACEE >ss_pred CEEEEEECCHHHCCHHHHHHHCCCCCCCHHCCEEEECCC >ss_conf 947576188355024489873220030000682111159 >Consensus tiixvkctspkqcxxpckxxxgxxagakcmngkckcynn >d1sxma_ TIINVKCTSPKQCSKPCKELYGSSAGAKCMNGKCKCYNN >UniRef50_P59847(1-39:39) Potassium channel toxin alpha-KTx 2.5 n=19 Tax=Buthidae RepID=KAX25_CENLM E=2e-08 s/c=1.55 id=74% cov=97% TVIDVKCTSPKQCLPPCKAQFGIRAGAKCMNGKCKCY-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * * 0 * * * 1 0 * * * * * * 1184 0 0 I 2 * * * * * * * 1000 * * * * * * * * * 1000 * * 2 0 * * * * * * 1184 0 0 I 3 * * * * * * * 0 * * * * * * * * * * * * 3 0 * * * * * * 1184 0 0 N 4 * * 1000 * * * * * * * * 1000 * * * * * * * * 4 0 * * * * * * 1184 0 0 V 5 * * * * * * * * * * * * * * * * * 0 * * 5 0 * * * * * * 1184 0 0 K 6 * * * * * * * * 0 * * * * * * * * * * * 6 0 * * * * * * 1184 0 0 C 7 * 0 * * * * * * * * * * * * * * * * * * 7 0 * * * * * * 1184 0 0 T 8 * * * * * * * * * * * * * * * * 0 * * * 8 0 * * * * * * 1184 0 0 S 9 * * * * * * * * * * * * * * * 0 * * * * 9 0 * * * * * * 1184 0 0 P 10 * * * * * * * * * * * * 0 * * * * * * * 10 0 * * * * * * 1184 0 0 K 11 * * * * * * * * 0 * * * * * * * * * * * 11 0 * * * * * * 1184 0 0 Q 12 * * * * * * * * * * * * * 0 * * * * * * 12 0 * * * * * * 1184 0 0 C 13 * 0 * * * * * * * * * * * * * * * * * * 13 0 * * * * * * 1184 0 0 S 14 * * * * * * * * * 1000 * * * * * 1000 * * * * 14 0 * * * * * * 1184 0 0 K 15 * * * * * * * * 1000 * * * 1000 * * * * * * * 15 0 * * * * * * 1184 0 0 P 16 * * * * * * * * * * * * 0 * * * * * * * 16 0 * * * * * * 1184 0 0 C 17 * 0 * * * * * * * * * * * * * * * * * * 17 0 * * * * * * 1184 0 0 K 18 * * * * * * * * 0 * * * * * * * * * * * 18 0 * * * * * * 1184 0 0 E 19 1000 * * 1000 * * * * * * * * * * * * * * * * 19 0 * * * * * * 1184 0 0 L 20 * * * * * * * * * 1000 * * * 1000 * * * * * * 20 0 * * * * * * 1184 0 0 Y 21 * * * * 1000 * * * * * * * * * * * * * * 1000 21 0 * * * * * * 1184 0 0 G 22 * * * * * 0 * * * * * * * * * * * * * * 22 0 * * * * * * 1184 0 0 S 23 * * * * * * * 1000 * * * * * * * 1000 * * * * 23 0 * * * * * * 1184 0 0 S 24 * * * * * * * * * * * * * * 1000 1000 * * * * 24 0 * * * * * * 1184 0 0 A 25 0 * * * * * * * * * * * * * * * * * * * 25 0 * * * * * * 1184 0 0 G 26 * * * * * 0 * * * * * * * * * * * * * * 26 0 * * * * * * 1184 0 0 A 27 0 * * * * * * * * * * * * * * * * * * * 27 0 * * * * * * 1184 0 0 K 28 * * * * * * * * 0 * * * * * * * * * * * 28 0 * * * * * * 1184 0 0 C 29 * 0 * * * * * * * * * * * * * * * * * * 29 0 * * * * * * 1184 0 0 M 30 * * * * * * * * * * 0 * * * * * * * * * 30 0 * * * * * * 1184 0 0 N 31 * * * * * * * * * * * 0 * * * * * * * * 31 0 * * * * * * 1184 0 0 G 32 * * * * * 0 * * * * * * * * * * * * * * 32 0 * * * * * * 1184 0 0 K 33 * * * * * * * * 0 * * * * * * * * * * * 33 0 * * * * * * 1184 0 0 C 34 * 0 * * * * * * * * * * * * * * * * * * 34 0 * * * * * * 1184 0 0 K 35 * * * * * * * * 0 * * * * * * * * * * * 35 0 * * * * * * 1184 0 0 C 36 * 0 * * * * * * * * * * * * * * * * * * 36 0 * * * * * * 1184 0 0 Y 37 * * * * * * * * * * * * * * * * * * * 0 37 0 * * * * * * 1184 0 0 N 38 * * * * * * * * * * * 0 * * * * * * * * 38 0 * * * * * * 1000 0 0 N 39 * * * * * * * * * * * 0 * * * * * * * * 39 0 * * 0 * * * 1000 0 0 //