HHsearch 1.5 NAME d1r6ta1 FAM FILE d1r6ta1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1r6ta1.a3m DATE Mon Mar 8 16:57:20 2010 LENG 54 match states, 54 columns in multiple alignment FILT 64 out of 68 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.3 EVD 0.4561 1.1731 SEQ >ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHSSSCCCC >sa_dssp EEDEECCDDADEBCEDBDDCEEDECDEEECDEBCEDBEDCDEDBEEECEEECEE >ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >ss_conf 988999999999999999985278898998999999999999999974882469 >Consensus xsxxeLxxxIxxQGxxVRxLKaxkaxkxxixxaVxxLLxLKxxyKxxTGxdxka >d1r6ta1 ASLLELFNSIATQGELVRSLKAGNASKDEIDSAVKXLVSLKXSYKAAAGEDYKA >UniRef50_A8PJX1(789-838:1572) Bifunctional aminoacyl-tRNA synthetase, putative n=1 Tax=Brugia malayi RepID=A8PJX1_BRUMA E=9e-06 s/c=1.03 id=37% cov=85% -NILKLSEQIKEQGDLVRSLKAADPKGVKTKEAIATLLSLKKTFQE-------- >UniRef50_UPI0000D56872(882-923:926) PREDICTED: similar to AAEL014709-PA n=1 Tax=Tribolium castaneum RepID=UPI0000D56872 E=1e-05 s/c=1.22 id=37% cov=80% -----IEDQIAVQGSLVRKMKESGASKPEWQPEVAKLLELKAKLASL------- >UniRef50_B6VBY8(939-991:1841) Putative uncharacterized protein n=1 Tax=Caenorhabditis sp. PS1010 RepID=B6VBY8_9PELO E=1e-13 s/c=1.47 id=37% cov=100% TSPLDVYNDIEKQGNIVRDLKSKDAKSQATKDAIAKLLELKKQYKELTGADHK- >UniRef50_P28668(1121-1169:1714) Prolyl-tRNA synthetase n=125 Tax=Eukaryota RepID=SYEP_DROME E=3e-10 s/c=1.35 id=42% cov=93% ----ELTQEINAQGEKVRAAKGNKAAKEVIDAEVAKLLALKAKYKEVTGTDFP- >UniRef50_B7PKR5(765-813:1502) Glutamyl-tRNA synthetase, cytoplasmic, putative n=4 Tax=Coelomata RepID=B7PKR5_IXOSC E=2e-10 s/c=1.37 id=40% cov=93% ----ELSSKIQQAGDQVRQLKASKAEKSAIDGSVAVLLKLKGEFKKLTGKDWQ- >UniRef50_B4KMR8(898-943:1032) GI20156 n=2 Tax=Drosophila RepID=B4KMR8_DROMO E=9e-08 s/c=1.26 id=34% cov=87% -SVQALEQAVQAQGDKVRQLKASTKDKAVWQPEVNKLLELKKQLEAA------- >UniRef50_D0NMW4(2-54:537) Tryptophanyl-tRNA synthetase n=1 Tax=Phytophthora infestans T30-4 RepID=D0NMW4_PHYIN E=2e-06 s/c=1.02 id=31% cov=89% -----LTDKIVATGNAIRELKAAKdaGNAEAISAKLQELLALKAEFKTLTGADY-- >UniRef50_UPI000180C1BF(852-901:1442) PREDICTED: similar to glutamyl-prolyl-tRNA synthetase n=1 Tax=Ciona intestinalis RepID=UPI000180C1BF E=4e-08 s/c=1.18 id=40% cov=83% ---------VTEQGGKVRKLKSEGASKDAVQAEVQQLLKLKADFKEKFGIEYK- >UniRef50_A9URH0(823-873:1312) Predicted protein (Fragment) n=1 Tax=Monosiga brevicollis RepID=A9URH0_MONBE E=3e-10 s/c=1.30 id=43% cov=91% ----EIEKEIQVQGDKIRDLKASKASKDELKPFIDRLLSLKAEFKQATGRDF-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 1338 * * * * * * * * * * * * * * 1642 1816 * * * 1 0 * * * * * * 2331 0 0 S 2 3685 * 4040 * * * * * * * * 2872 * * * 464 * * * * 2 0 * * * * * * 2917 0 0 L 3 1859 * * * * * * 3636 * 2485 * * 2734 * * * 4163 1948 * * 3 0 * * * * * * 2917 0 0 L 4 3141 * * * * * * * 3936 873 * * * 3403 * 3627 * 3323 * * 4 0 * * * * * * 2944 0 0 E 5 4134 * 1586 1135 * * * * 4693 * * 5547 * 3898 * * * 5179 * * 5 0 * * * * * * 3281 0 0 L 6 * * * * * * * 2340 4845 445 * * * * * * * 4918 * * 6 0 * * * * * * 3418 0 0 F 7 5622 * 4694 2637 4076 * * * 5967 2757 5688 4694 * 4783 * 3100 3478 * * 1964 7 0 * * * * * * 3437 0 0 N 8 2830 * 2405 3179 * 5622 6233 * 2807 * * 2599 * 3432 * 3280 5447 * * * 8 0 * * * * * * 3437 0 0 S 9 3267 4998 6441 2894 * * * * 1925 6474 * * * 1735 4123 3533 * * * * 9 0 * * * * * * 3417 0 0 I 10 5487 * * * * * * 607 * * * * * * * * * 1639 * * 10 0 * * * * * * 3417 0 0 A 11 1939 * 4289 2584 * 5232 5901 * 4108 * * 4656 * 2736 * 6483 2763 3802 * * 11 0 * * * * * * 3417 0 0 T 12 1273 6320 4960 2577 * * * 6004 3507 * * * * 2574 * 5447 5037 4343 * * 12 0 * * * * * * 3417 0 0 Q 13 4298 * * * * * * * * * * * * 141 * * 4572 * * * 13 0 * * * * * * 3412 0 0 G 14 4184 * * * * 123 * * * * * * * * * 5241 * * * * 14 0 * * * * * * 3412 0 0 E 15 4025 * 1496 2030 * 5441 * * * 4013 * 2566 * * * 4462 5241 6203 * * 15 0 * * * * * * 3412 0 0 L 16 3497 * * * * * * 3288 1492 2024 * 6167 * 4878 * * 4227 3232 * * 16 0 * * * * * * 3412 0 0 V 17 * * * * * * * 2855 * * * * * * * * * 215 * * 17 0 * * * * * * 3412 0 0 R 18 * * * * * * * * * * * * * * 0 * * * * * 18 0 * * * * * * 3412 0 0 S 19 4154 * 2651 2029 * 5241 * * 2242 * 5907 5224 * 3466 5656 3114 4949 * * * 19 0 * * * * * * 3412 0 0 L 20 4519 * * * * * * 4427 * 260 4230 * * * * * * 5550 * * 20 0 * * * * * * 3412 0 0 K 21 * * * * * * * * 0 * * * * * * * * * * * 21 18 6357 * 0 * * * 3412 1000 0 A 22 999 * * 5741 * 3073 * * 5229 * 5961 5126 * * * 2160 3904 * * * 22 50 * 4864 * * * * 3412 0 0 G 23 2594 * 4490 2438 * 5795 * * 1994 * * 3816 * 5879 * 2010 * * * * 23 0 * * * * 0 * 3388 0 1184 N 24 * * 2299 * * 4538 * * 938 * * 3396 * 5656 5476 * 3400 * * * 24 84 4146 * 1000 1000 * * 3412 1353 0 A 25 596 * * * * 3219 * * 4050 * * * 3403 * * 4142 * 5677 * * 25 0 * * * * * * 3412 0 0 S 26 2979 * 2249 3998 * * * * 2138 * * 4572 2913 * * 2430 6314 * * * 26 0 * * * * * * 3412 0 0 K 27 3461 * * * * 5160 * * 578 * * * * * * 2436 5229 * * * 27 64 6357 5013 0 * * * 3412 1000 0 D 28 2299 * 2145 2736 * * * * 4486 * * 5079 3705 2524 * 4207 6201 5148 * * 28 0 * * * * * 0 3365 0 1000 E 29 2686 * 3256 1749 * * * 5696 4139 4351 * * * 3232 * * 5434 2413 * * 29 30 5626 * 0 * * 0 3365 1000 1000 I 30 4925 * * * * * * 1532 * 4115 * * * * * 4952 2718 1924 3110 * 30 0 * * * * 0 * 3365 0 1000 D 31 4380 * 1462 3908 * 6053 * * 1789 * * 6129 * 3089 * 4572 6241 5013 * * 31 0 * * * * * * 3412 0 0 S 32 1447 * 2738 2906 * 5369 * 6264 6009 * * * 2452 5492 * 4031 * 5016 * * 32 0 * * * * * * 3412 0 0 A 33 778 * * 1600 5602 * * * 4572 * * * * * * 5369 * * * * 33 0 * * * * * * 3412 0 0 V 34 * * * * * * * 1776 * 4572 * * * * * * * 587 * * 34 0 * * * * * * 3412 0 0 K 35 1700 * 4626 3957 * * * * 1732 * * 3776 * 2695 * 6253 4452 * * * 35 0 * * * * * * 3412 0 0 X 36 4378 5166 * 2673 * * * 4379 1672 3821 * * * 3574 4844 * 3216 3209 * * 36 0 * * * * * * 3405 0 0 L 37 * * * * * * * * * 0 * * * * * * * * * * 37 0 * * * * * * 3412 0 0 V 38 * * * * * * * 5380 * 127 * 5476 * * * * * 4728 * * 38 0 * * * * * * 3412 0 0 S 39 1941 * 2723 2527 * 5646 * * 3850 * * 4788 * 3299 4435 2823 * * * * 39 0 * * * * * * 3412 0 0 L 40 * * * * * * * * * 86 5013 * * * 5229 * * * * * 40 0 * * * * * * 3412 0 0 K 41 * * * * * * * * 0 * * * * * * * * * * * 41 0 * * * * * * 3412 0 0 X 42 1288 * * * * 4741 * * 1825 4041 * 4484 * 4379 5539 * 3723 5628 * * 42 0 * * * * * * 3417 0 0 S 43 5636 * 2747 1951 * * * * 3801 * * 3809 * 1537 6168 4606 5074 * * * 43 0 * * * * * * 3417 0 0 Y 44 * 5283 * * 2036 * * * * 2599 * * * * * * * * * 823 44 0 * * * * * * 3400 0 0 K 45 3159 * * 4234 * * * * 313 * * * * 5068 * * * * * * 45 0 * * * * * * 3400 0 0 A 46 2998 * 3458 1685 * * * 5398 3649 * * * * 4755 4729 2445 3694 4889 * * 46 0 * * * * * * 3340 0 0 A 47 1795 * * 5901 * * * 4376 3787 1522 * * * * 5815 4877 * 2518 * * 47 0 * * * * * * 3302 0 0 A 48 4560 * * 5404 4785 * * 5696 4932 * * * * * * 3350 420 * * * 48 0 * * * * * * 3210 0 0 G 49 * * * * * 0 * * * * * * * * * * * * * * 49 0 * * * * * * 3210 0 0 E 50 4127 * * 2404 5074 * * 4840 2366 5205 * * * 2773 5377 2934 3126 4257 * * 50 0 * * * * * * 3210 0 0 D 51 * * 426 1967 * * * * * * * * * * * * * * * * 51 0 * * * * * * 3131 0 0 Y 52 * * * * 2649 * 3239 * * 4899 * * * * * * * * 2071 1110 52 0 * * * * * * 3058 0 0 K 53 * * * * * * * * 424 * * * 2716 4310 * * 4270 * * * 53 0 * * * * * * 2939 0 0 A 54 0 * * * * * * * * * * * * * * * * * * * 54 0 * * 0 * * * 2127 0 0 //