HHsearch 1.5 NAME d1q1oa_ FAM FILE d1q1oa_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1q1oa_.a3m DATE Mon Mar 8 16:16:43 2010 LENG 98 match states, 98 columns in multiple alignment FILT 54 out of 58 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.6 EVD 0.4039 -0.5259 SEQ >ss_dssp CCSSCEEEEEEECSSCSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHCSSCCCCCCCEEEECSSSCEEEECSHHHHHHHHHHHHHTTCCEEEEEEC >sa_dssp EEEDBADADACBCEEDEEECEDDDBDCEADDECEBDCABECADDCADEDCEEEDEEBEDABBDCEECEDDEADDEECAEEACEBBEEDECEDBDADBD >ss_pred CCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEEEEC >ss_conf 98860899999535546666673699998489998999999998830046667776037899706898999960257999999985145626999969 >Consensus xpxxxixvrixyxnxxxxxxxxxxxtLvVxxxixfxdLxxkIxrklxxxxxxxxxxxlxlkYxDedgdxvxlxxdxDxxxaxdxxxxxxxxxlxixlx >d1q1oa_ GPLGSILFRISYNNNSNNTSSSEIFTLLVEKVWNFDDLIMAINSKISNTHNNNISPITKIKYQDEDGDFVVLGSDEDWNVAKEMLAENNEKFLNIRLY >UniRef50_Q6CBW7(687-766:769) YALI0C14828p n=1 Tax=Yarrowia lipolytica RepID=Q6CBW7_YARLI E=5e-16 s/c=1.07 id=38% cov=83% ---SNIKVRVQY--------FQDVFTLIVPAKVTYDQLIERVERKVRLC-GKVVPAPLRIKYQDEDGDMVTIHSDEDIAMA---LEQKNLEQLNI--- >UniRef50_Q2R7K5(760-839:858) RWP-RK domain containing protein, expressed n=4 Tax=Oryza sativa RepID=Q2R7K5_ORYSJ E=4e-13 s/c=0.94 id=22% cov=83% ----TVVVKASYKNDTIRFK--------LLPSMKYEQLLEEIAKRLKLSI-----GLFQLKYKDDEGDWVILASDADLQECLEILDTTRLRILKLQV- >UniRef50_A5DJC8(642-713:718) Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DJC8_PICGU E=1e-11 s/c=0.98 id=32% cov=70% -----VLVQLIHQNNDAG-------TLVLPASITFPEVYQKIGNRL--------GDVQRLRYKDEDGDYVVMDSNEDWAIAVDMVEET---------- >UniRef50_B0D0Z3(461-530:546) NADPH oxidase regulator NoxR n=3 Tax=Agaricales RepID=B0D0Z3_LACBS E=0.0002 s/c=0.68 id=24% cov=72% -----IRVKLHYQDDTRG--------MTLTPDTPFADFMDKVTAKFGKQIN-----GLGLKFKDEDGGKVTLRDESDYELAIETARES---------- >UniRef50_A6S9L4(959-1045:1066) Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A6S9L4_BOTFB E=2e-17 s/c=1.03 id=30% cov=81% -PEGDTLLPTQLKVKVN--CDGNYVTLVVAFNITYQSLTDRIDAKVGRFSTNAIARGtMRLRYRDEDGDFVTIESDDDIQIA----------------- >UniRef50_Q4PBU1(1014-1101:1102) Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PBU1_USTMA E=1e-15 s/c=0.95 id=25% cov=82% -PSSAIKLNISF--------AEDRYVVVVLSSTPFSTLLEKVTKKIRLCSGKNLEHTLRMRYIDEDGDAVLISDDDDVQMAFDSARAS---------- >UniRef50_B9HN04(575-657:675) Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HN04_POPTR E=5e-15 s/c=0.99 id=27% cov=68% ----------------------------LQPNWGFRDLQREIAKRFEIDDFSRIG----LKYLDNDHESILLTCDADLEECKDLLGFSQSRTIKITLY >UniRef50_A0FEW6(1008-1093:1112) Cdc24 n=2 Tax=Filobasidiella neoformans RepID=A0FEW6_CRYNV E=2e-12 s/c=0.86 id=31% cov=68% ---GSVLVKLRFGNDQ--------FILGVSQGIDFITLYQKIHKKIRLCSSSNRPTnehdKLQIRYVDNDGDEIQVKFDSD------------------- -- >UniRef50_Q92734(8-89:400) Protein TFG n=29 Tax=Deuterostomia RepID=TFG_HUMAN E=3e-06 s/c=0.65 id=27% cov=50% -------------------------------DITYDELVLMMQRVFRGKLLSNDE--VTIKYKDEDGDLITIFDSSDLSFA----------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 P 2 * * * * * * * * * * * * 0 * * * * * * * 2 0 * * * * * * 2360 0 0 L 3 * * 2714 1304 * * * * * 2095 * * * * * 2262 * * * * 3 0 * * * * * * 2360 0 0 G 4 * * * * * 1275 * * * * * 2321 * * * 1371 * * * * 4 0 * * * * * * 3000 0 0 S 5 3376 * 3083 * * * * * * * * 3683 * 3538 * 1667 1705 * * * 5 0 * * * * * * 3287 0 0 I 6 * * * * * * * 1086 * 2986 * * * * * * 3399 1699 * * 6 0 * * * * * * 3699 0 0 L 7 * * * * * * * * 2234 1093 * * * * 2717 * 3467 3717 * * 7 0 * * * * * * 3699 0 0 F 8 * * * * 3369 * * 3987 * 2582 3467 * * * * * * 779 * * 8 0 * * * * * * 3699 0 0 R 9 * * * * * * * * 1564 * * 3793 3399 3872 1229 * * * * * 9 0 * * * * * * 3699 0 0 I 10 3717 * * * * * * 1426 * 2059 * * * * * * 3399 2204 * * 10 0 * * * * * * 3699 0 0 S 11 3987 * * * * * 3522 3872 3662 * * 3941 * 2678 3563 1708 3467 * * * 11 0 * * * * * * 3699 0 0 Y 12 * * * * 2185 * 3872 * * 3399 * * * * * * * * * 697 12 320 * 2331 * * * * 3699 0 0 N 13 * * * 3289 * 3271 * * 2173 * * 1692 * 1928 * * * * * * 13 124 * 3598 * * * 0 3487 0 1904 N 14 * * 3210 2198 * * * * * * * 919 * * * * * 2786 * * 14 153 * 3312 * * * 0 3414 0 2174 N 15 * * 1126 * * * * * 2616 * * 1963 * * * 3034 * * * * 15 0 * * * * * 0 3248 0 2320 S 16 * 3034 3384 * * * * * * * * * * 3032 * 2637 1573 2616 * * 16 404 * 2033 * * * 0 3248 0 2320 N 17 2889 * * * * * * 2965 * * * 1184 * * 2713 * * 2792 * * 17 353 * 2205 * * * 0 2780 0 2751 N 18 * * * * * 1916 * * * * * 1045 * * 1997 * * * * * 18 444 * 1916 * * * 0 2672 0 2944 T 19 * 2421 * * 1508 * * * * * * * * * * * 1115 * * * 19 0 * * * * 2188 357 2252 0 3248 S 20 * 3162 2324 3440 * * * * 1905 * * * * * * 1602 * * * * 20 448 * 1905 * * 2046 400 2573 0 2934 S 21 1740 * 3504 * 2899 * * * * * * * * * * 1730 2499 * * * 21 0 * * * * 2938 202 2631 0 2993 S 22 * * * 2852 * 1030 * * * * * * * 3058 * 1990 * * * * 22 0 * * * * 2648 251 2732 0 2903 E 23 * * 1037 3326 * * * * * * * 1681 * * * 3307 * * * * 23 0 * * * * * 0 2979 0 2769 I 24 * * * * 3381 * * 2046 * * * * * * 3350 3335 * 3613 * 1385 24 0 * * * * 1425 672 2966 0 2769 F 25 * * * * 1231 * * 4380 * 3729 3498 * * * * * * 2809 * 2190 25 0 * * * * 1889 454 3322 0 2276 T 26 * * * * * * * 3357 * * * * * * * * 758 1685 * * 26 0 * * * * 1424 673 3377 0 1875 L 27 * * * * * * * 3692 * 532 3566 * * * * * * 2768 * * 27 0 * * * * * 0 3855 0 1435 L 28 * * * * * 3829 * 2323 * 2339 * * * 3692 * * 3566 1433 * * 28 0 * * * * 0 * 3855 0 1435 V 29 * * * * * * * 4111 * 1716 4787 * * * * * * 733 * * 29 0 * * * * * * 4361 0 0 E 30 2670 * 4652 3772 * * 5331 * * 3448 * 4447 3021 2445 * 2293 4143 * * * 30 0 * * * * * * 4361 0 0 K 31 2592 * * * 3462 * 4963 * 3334 * * * 2016 4283 4253 2579 4762 4827 * 5526 31 0 * * * * * * 4368 0 0 V 32 5333 * 1932 4788 * 3482 * 5226 5053 * 5393 1915 * 3764 * 2903 * 4870 * * 32 32 5503 * 0 * * * 4499 1000 0 W 33 * * * * * * * 1303 4826 4198 5210 * * * * 3971 2953 5064 1971 * 33 0 * * * * * * 4486 0 0 N 34 * * 4459 3585 * 1989 * * 5224 5242 5420 3759 3581 * * 2645 2149 * * * 34 0 * * * * * * 4458 0 0 F 35 * * * * 976 * * 4028 * 5383 * * * * * * * * * 1300 35 0 * * * * * * 4476 0 0 D 36 4310 * 2259 2865 * * * 4586 4657 4843 * 4750 5438 2599 2718 4260 4679 5732 * * 36 0 * * * * * * 4476 0 0 D 37 * * 1409 2195 * * 5736 * 5832 * * 3642 * 4221 5402 2851 3780 * * * 37 0 * * * * * * 4476 0 0 L 38 * * * * 4310 * * * * 209 5118 * * * * * * 4170 * * 38 0 * * * * * * 4476 0 0 I 39 * * * * * * * 2243 3674 2242 4310 5123 * 3014 4088 * 4382 3546 * 3269 39 0 * * * * * * 4476 0 0 M 40 5266 * 1772 2479 * * 5428 * * 2656 5050 * * 2147 5318 4679 * * * * 40 0 * * * * * * 4476 0 0 A 41 5050 * * 1969 * * * 4028 1647 * 3371 * * 4843 2306 * * * * * 41 0 * * * * * * 4476 0 0 I 42 * * * * * * * 800 * * 3409 * * * * * 5750 1676 * * 42 0 * * * * * * 4528 0 0 N 43 2420 * 2580 4272 * 3524 4607 4814 4064 * * 3334 * 2999 * 5155 3638 4712 * * 43 0 * * * * * * 4528 0 0 S 44 2236 * * * * * 3803 * 2172 * * 3705 * * 1504 3942 * * * * 44 0 * * * * * * 4528 0 0 K 45 * * * * * * * 5205 1057 * * * * 4814 1506 * * 3899 4739 * 45 0 * * * * * * 4528 0 0 I 46 * * * * 1539 * * 2297 * 1444 * * * * * * * 3558 * * 46 213 * 2863 * * * * 4528 0 0 S 47 3471 * * 5188 * 3122 * 4632 3076 4977 * 3023 * 4789 1910 2722 * * * * 47 0 * * * * * 0 4403 0 2394 N 48 * * * 4825 * 3243 * 3157 3591 1662 * 4887 * * 2545 4400 4632 4181 * * 48 78 * 4245 * * * 0 4403 0 2394 T 49 4711 2160 4929 * 2624 * * * 2932 * * 5218 * 3996 * 2282 3516 5089 * * 49 231 3613 3921 1642 557 * 0 4379 1580 2451 H 50 * * 2722 * * 3483 4736 2870 4277 3081 4203 4526 * 4813 * 3116 2588 * * * 50 166 3696 4976 498 1777 1066 937 4311 1571 2944 N 51 * * 3522 3592 5009 4032 * * 5071 5358 4479 1875 3698 * * 2999 3362 3903 * * 51 82 * 4173 * * 2240 343 4423 0 2521 N 52 3825 * * 3686 * 4865 * 3761 3993 * * 3252 * 5056 3371 1628 3528 4682 * * 52 34 * 5438 * * 1786 494 4304 0 2544 N 53 4266 * 2221 * * 3569 4085 * * * * 1915 5241 4881 3754 2620 * 5155 * * 53 0 * * * * * 0 4312 0 2417 I 54 * * 1836 5084 * 4684 * 1897 * 3079 * * * * 4436 * 3687 2828 * * 54 78 5253 5237 0 * 1353 717 4312 1000 2417 S 55 5364 * 3011 3442 5237 1775 * 4042 * 5373 * * 2921 * * 3369 4643 3519 * * 55 316 5490 2520 0 * 2114 379 4337 1000 2052 P 56 5017 5384 4054 * 5015 3232 3917 4853 3002 4739 * 2902 4780 * 5211 3337 2884 4237 * * 56 129 4250 4918 2000 415 1883 456 4274 1000 2777 I 57 4875 * * * * 2031 * 2514 2557 5041 * * 3707 * 3249 4265 4774 3726 * * 57 241 3287 4287 0 * 950 1052 4372 1403 2676 T 58 5246 * * * 2961 * * 3344 * 1480 3523 5942 * 4051 * 3152 4844 3695 * * 58 53 4804 * 0 * 2611 258 4366 1000 2128 K 59 * * 3150 * * 4203 5447 * 2630 * * * * 2578 1414 * 3876 * * 4733 59 0 * * * * 0 * 3182 0 2072 I 60 * * * * 4174 * * 2199 * 780 4472 * * * * * * 3329 * * 60 0 * * * * * * 3197 0 0 K 61 * * * * * * * * 504 * * 4415 * * 2011 * * * * * 61 0 * * * * * * 3197 0 0 Y 62 * * * * 3611 * * * * * * * * * * * * 5110 * 169 62 0 * * * * * * 3197 0 0 Q 63 5841 * * * * * * 5129 1595 1745 3914 * * 3565 3288 * * 3808 * * 63 0 * * * * * * 3197 0 0 D 64 * * 0 * * * * * * * * * * * * * * * * * 64 44 5044 * 0 * * * 3197 1000 0 E 65 * * 1569 957 * * * 5416 * * * 3991 * * * 4024 * * * * 65 0 * * * * * * 3197 0 0 D 66 * * 361 2805 * * * * * * * 4415 * * * * 4979 * * * 66 0 * * * * * * 3197 0 0 G 67 * * 3655 3328 * 614 4562 * * 4860 * 4529 * 6104 * 4928 * * * * 67 0 * * * * * * 3197 0 0 D 68 * * 859 1413 * 4541 * * * * * * * * * * 5044 * * * 68 0 * * * * * * 3197 0 0 F 69 5129 * * 4507 2624 * * * 4541 3045 4842 * * * * 4223 * * 1412 2867 69 0 * * * * * * 3197 0 0 V 70 * 4179 * * * * * 2368 * * 5454 * * * * * * 457 * * 70 0 * * * * * * 3197 0 0 V 71 4732 * * * * * * 5137 * 2414 3551 5969 * 4507 3124 3922 1591 3499 * * 71 0 * * * * * * 3197 0 0 L 72 * * * * 4685 * * 1744 * 993 3426 * * * * * * 3901 * * 72 0 * * * * * * 3197 0 0 G 73 3273 * 3628 3483 3426 3680 5964 * 4507 * * 3643 * 3853 4541 4649 2198 4471 * * 73 0 * * * * * * 3197 0 0 S 74 * 1894 2270 * 4507 3850 * * * * * 4974 * * 5683 1554 5759 * * * 74 0 * * * * * * 3197 0 0 D 75 * * 584 3855 * 5582 * * * * * 4893 * * * 2525 4810 * * * 75 0 * * * * * * 3197 0 0 E 76 2134 * 2063 2470 * 4087 * * * * * 5004 * 5445 * 2062 * * * * 76 0 * * * * * * 3197 0 0 D 77 4404 * 70 * * * * * * * * * * * * * * * * * 77 0 * * * * * * 3197 0 0 W 78 * * * * 4730 * * 3058 * 1119 * * * * * * * 2947 2314 4296 78 0 * * * * * * 3229 0 0 N 79 4557 * * 1965 * 5049 5350 * * 4466 4966 3587 * 1686 * 2922 * 4523 * * 79 0 * * * * * * 3229 0 0 V 80 * * * 1501 2585 * * 2823 * 2560 3299 * * * * * * 3887 * * 80 0 * * * * * * 3229 0 0 A 81 758 1501 * * * * * * * * * * * * * * * 4171 * * 81 37 * 5320 * * * * 3229 0 0 K 82 * * * * 2399 * * 2231 1527 3164 5165 * * * 5638 * * 3459 * * 82 0 * * * * * 0 3389 0 1000 E 83 * * 1172 1606 * * * * * * 3849 * * 3574 * 3749 * * * * 83 0 * * * * * 0 3389 0 1000 M 84 * * 4916 3676 * * * 2047 * 2608 2097 * * * * 4320 3600 3104 * * 84 61 * 4600 * * 0 * 3422 0 1000 L 85 2554 5089 * * * * 3665 * * 1350 4843 * 5398 * * * * 3903 3102 3519 85 0 * * * * * 0 3461 0 1000 A 86 4930 * 3433 2108 * 3993 * * 2575 * * * * * 1490 4986 5345 * * * 86 0 * * * * * 0 3507 0 1000 E 87 4262 * 3342 1275 3818 * * * * 3692 * * * 4647 * 2646 5172 4766 * 5411 87 0 * * * * * 0 3507 0 1000 N 88 * 3973 3750 * * * * 3380 4503 * * 3784 * 3363 * 1183 3689 4870 * * 88 0 * * * * * 0 3495 0 1000 N 89 * * * 4051 * 2573 2881 * 4811 * * 2766 * 2194 3755 2639 * * * * 89 0 * * * * 0 * 3568 0 1000 E 90 * * 3722 2974 * * * 4916 * 3461 4717 3710 * 3992 2843 1778 3947 * * * 90 0 * * * * * * 3604 0 0 K 91 * * 3973 2949 * * 3749 * 2436 * * 2787 * 4831 1444 * * * * * 91 0 * * * * * * 3604 0 0 F 92 4545 * * * 2921 * * 1785 * 3985 3834 * * 4032 * * 1752 4519 * * 92 0 * * * * * * 3443 0 0 L 93 * * * * * * * 1730 * 924 * * * * * * * 2543 * * 93 112 3740 * 2585 263 * * 3443 1000 0 N 94 * * * 3191 * * * 4515 1200 * * 2173 * * 2398 * * * * * 94 0 * * * * * * 3411 0 0 I 95 * * * * * * * 976 * 1531 4812 * * * * * * 3185 * * 95 0 * * * * * * 3411 0 0 R 96 3966 * * * * * * * 3180 4234 * * * 2058 3446 1638 3065 * * * 96 0 * * * * * * 3224 0 0 L 97 * * * * * * * 2849 * 784 * * * * * * * 1835 * * 97 0 * * * * * * 3224 0 0 Y 98 * * * * 2137 * 1429 * * * * * * * * * * * * 1317 98 0 * * 0 * * * 2884 0 0 //