HHsearch 1.5 NAME d1ogwa_ FAM FILE d1ogwa_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1ogwa_.a3m DATE Mon Mar 8 23:02:59 2010 LENG 74 match states, 74 columns in multiple alignment FILT 103 out of 844 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.6 EVD 0.4409 0.8512 SEQ >ss_dssp CEEEEEBTTSCEEEEECCTTSBHHHHHHHHHHHHCCCGGGEEECBTTBCCTTSBGGGGTCCTTCCCEEECTTCC >sa_dssp CDBCBDCEEEDDBCBEADCECDBEDBBDCADEEDECCCEBADCCCEEDEEDEDCBDECEBEEDCDDBCCDEEDE >ss_pred CEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHEEEEECCEECCCCCHHHCCCCCCCEEEEEEECCC >ss_conf 98999828998999995688848999999998738996776888884865747589849999879999980799 >Consensus mxIxvkxxxgxxxxixvxxxxtVxxlKxxixxxxxixxxxqxLxxxGxlxDxxtLxxxgIxxxsxxlvxrxxgg >d1ogwa_ MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQEDGRTLSDYNIQKESTHLVLRLRGG >UniRef50_Q4PIS6(88-152:170) Putative uncharacterized protein n=1 Tax=Caenorhabditis elegans RepID=Q4PIS6_CAEEL E=0.0004 s/c=0.70 id=20% cov=86% LDLTIR-VNGNVLRNRVSSLLTIRDLKHLVHCQTNYPESIMWIVWNGRRLdrDEWTLYEYHITDDS---------- >UniRef50_UPI000180CF05(15-88:202) PREDICTED: similar to Si:dkey-216e9.4 protein isoform 2 n=2 Tax=Ciona intestinalis RepID=UPI000180CF05 E=0.0002 s/c=0.64 id=22% cov=97% MKITL-TVGATRHPVEIPEDATVKDLMQTVVEKCKITPENQKLIHRGVTissDPEKLLTSCDVKSRSRVMVIGKR-- >UniRef50_Q9DAF3(1-76:408) Protein DDI1 homolog 1 n=14 Tax=Eumetazoa RepID=DDI1_MOUSE E=0.0006 s/c=0.59 id=23% cov=96% MLITVycvrRDLTEVTFSLQVNPDFELSNFRVLCELESGVPAEEAQIVYMEQLLtdDHCSLGSYGLKDGDMVVLLQ---- >UniRef50_Q6NYU6(28-91:509) Midnolin n=8 Tax=Euteleostomi RepID=MIDN_DANRE E=4e-06 s/c=0.82 id=20% cov=88% MNLYIHSTTGTRFELSLPAEETVEGLKRRLSQRLKVPKERLALLHKETRLSSGKLQDLGITDGS---------- >UniRef50_A0EDC0(39-106:575) Chromosome undetermined scaffold_9, whole genome shotgun sequence n=3 Tax=Paramecium tetraurelia RepID=A0EDC0_PARTE E=0.0005 s/c=0.67 id=21% cov=78% --------KGNDFTIKMYSWMKISILKQKIHKTTKLDQADFRILYKNQElsLNNEDLEDYGIKNHVT--------- >UniRef50_Q55BC4(3-71:512) Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Dictyostelium discoideum RepID=Q55BC4_DICDI E=0.0005 s/c=0.66 id=18% cov=92% -KVNVKWNKEK-YEVDVDPSEPVSSFKGQLYSLTMVPIERQKImgFKGGILKDDAQWKDLDLTEGKNLMLM----- >UniRef50_A2G1A3(1-65:343) Ubiquitin family protein n=1 Tax=Trichomonas vaginalis RepID=A2G1A3_TRIVA E=5e-06 s/c=0.80 id=20% cov=88% MLINCEYVKGENHTIYVKKLNSVAECKNVLAQEIDVEPDRINFVYQGKLLiNERTIDSYGVTDGT---------- >UniRef50_A8XF46(166-236:1901) Putative uncharacterized protein n=2 Tax=Caenorhabditis briggsae RepID=A8XF46_CAEBR E=2e-05 s/c=0.71 id=21% cov=95% -QVTVKTLDDREVSVTIGRNQPVQQLIDEARRQLNVTTGNQRIIFGGRVLNSTwTLQNAGITNGqTVHMIDR---- >UniRef50_A0EDR3(1-67:75) Chromosome undetermined scaffold_90, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0EDR3_PARTE E=0.001 s/c=0.67 id=23% cov=89% MKIIICNMMEQHLEFQVNPNDTVLQLKQLFCEKEGSVLANCRLTHGqDELHDNQTIQQANLKEGDI--------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * 5688 * * 1936 * 3208 711 * * * * * * * * * 1 0 * * * * * * 7095 0 0 Q 2 * * 4161 3712 * * 4229 6087 2131 4194 * 6528 6195 2235 2702 3934 5198 5709 * 6113 2 24 5923 * 0 * * * 7375 1000 0 I 3 * * * * 5194 * * 1163 * 2624 * * * * * * * 1521 * 6009 3 0 * * * * * * 7483 0 0 F 4 6693 * * * 2628 * 4870 2603 4015 4068 * 3695 * 6011 3835 4882 1964 4424 * 6837 4 0 * * * * * * 7483 0 0 V 5 5463 4419 * * 4164 * * 1598 * 2872 * * * * * * 6113 1346 * * 5 70 5399 5397 2000 415 * * 7572 1624 0 K 6 * 6239 * 4384 * * 4527 6376 1237 4855 6448 5964 * 6352 1808 4424 4246 * * * 6 21 * 6118 * * 0 * 7554 0 1733 T 7 6469 6534 4334 6582 4275 5286 4244 3897 6682 4580 6037 3935 5331 * 5437 2765 1985 4055 5398 4132 7 96 5498 4561 0 * 0 * 7571 1771 1000 L 8 4563 6058 * 4311 4320 6480 6811 4432 6526 1745 4257 4019 4076 5243 4865 3678 4610 3298 * 6390 8 20 6165 * 1000 1000 0 * 7571 1000 2188 T 9 4750 * 3546 4996 * 3304 4451 * 3528 * 4957 3074 6299 4528 4954 2470 2581 6422 * 6197 9 25 * 5859 * * * * 7739 0 0 G 10 5505 * 2939 3796 * 859 6726 * 5704 * * 4233 6580 4491 5395 4363 6028 * * * 10 61 5246 6038 936 1067 0 * 7867 2288 1700 K 11 6179 * 5026 2826 * 5825 6740 6902 2111 5649 * 3672 6261 3063 3289 3271 3473 5601 * * 11 75 4730 6292 0 * 0 * 7833 2707 1000 T 12 5293 6621 4391 3151 5761 5766 4727 3390 4694 4392 6341 4936 4789 4993 4166 2584 2501 5251 6665 * 12 60 5073 6476 1208 818 0 * 7865 2295 1000 I 13 5691 6487 * 6804 2209 * 3733 2711 4631 2959 5163 6322 * 6411 4890 5782 4723 3976 * 2818 13 14 6738 * 0 * 0 * 7827 1000 1000 T 14 * 6396 4030 2501 5149 6177 * 4152 3392 5029 * 4493 3450 4926 4749 3248 3066 4167 * 4657 14 0 * * * * * * 7799 0 0 L 15 * 6177 * * 3848 * * 2164 * 1788 4966 6317 * * 5658 * 5657 1768 * 5257 15 58 4677 * 620 1518 * * 7799 2778 0 E 16 5812 * 2528 2431 * 6281 4669 6702 4525 * 5707 3956 5120 3216 5021 3662 3081 5032 * 4655 16 0 * * * * * * 7798 0 0 V 17 3863 4600 * * 5848 4960 * 2379 * 2660 4526 5494 6639 * * 6385 6343 1392 * 6752 17 12 6940 * 0 * * * 7798 1000 0 E 18 5698 * 2301 3272 4809 3960 5496 * 3907 6678 * 3085 3373 4307 3549 3634 5191 * * 5833 18 27 5776 * 1585 585 * * 7798 1645 0 P 19 3352 6695 4160 3234 4826 4156 * 6820 4304 3265 * 3961 2306 5745 4846 3192 5357 5529 * * 19 12 6926 * 2585 263 * * 7798 1000 0 S 20 6832 5440 2374 4357 6463 7180 5441 * 3975 4801 6281 2436 6631 4360 5568 2883 2788 * 5165 * 20 0 * * * * * * 7798 0 0 D 21 3206 5481 2667 2254 6395 * 6832 4576 6094 4525 3810 4732 6940 4202 4871 4799 3161 * 5148 * 21 0 * * * * * * 7798 0 0 T 22 * * 4729 5177 6181 5579 * 6708 5530 4561 * 4805 4858 * 6100 2529 815 * * * 22 0 * * * * * * 7798 0 0 I 23 6239 * * * 4461 5613 * 2098 * 4079 6222 * * * * * 5858 743 * * 23 13 6802 * 0 * * * 7798 1000 0 E 24 2787 * 6583 2618 6455 2666 6288 * 3613 2702 * 6722 * 4964 4182 2801 * 6094 * 6661 24 0 * * * * * * 7798 0 0 N 25 4532 * 2840 2442 6094 6271 4869 5870 4274 6322 6387 3938 * 3098 5840 2704 3898 4495 * 6201 25 0 * * * * * * 7798 0 0 V 26 5899 6824 * * 2874 6590 * 3346 * 784 6455 * * * * * * 2864 * * 26 0 * * * * * * 7798 0 0 K 27 6519 * * * * * * 4580 338 5221 4743 6689 * 5942 3917 * * * * * 27 0 * * * * * * 7798 0 0 A 28 3385 * 3709 2527 6377 6352 5543 4905 3127 * 5532 4093 * 2909 2771 4437 4911 5538 * * 28 0 * * * * * * 7798 0 0 K 29 4585 6354 * 3849 5681 * * 3939 2171 3112 3454 6032 * 2991 2883 5501 6734 4778 * 5748 29 0 * * * * * * 7798 0 0 I 30 4729 5647 * * 4643 6547 5531 1441 * 1945 6631 6574 * * * * 6100 2358 * 6405 30 18 6322 * 0 * * * 7798 1000 0 Q 31 2834 4457 5591 2196 3745 5490 3428 * 4288 6338 * * * 3495 4193 2926 * 5995 * 4999 31 12 * 6896 * * * * 7798 0 0 D 32 3294 5293 3600 2774 6891 5145 6783 5295 2921 4278 6385 4841 * 3432 3832 3669 4156 5004 * 6218 32 17 6377 * 1000 1000 0 * 7799 1000 1000 K 33 4757 * * 2515 6583 6653 5498 4125 2989 3066 4671 5407 6400 3195 3150 5504 4047 4251 * 6463 33 41 5173 * 666 1435 * * 7798 2137 0 E 34 6100 4728 6322 3625 3697 6201 5070 4634 3976 2677 4074 6385 * 4429 6590 3627 2509 4785 6875 4512 34 36 5347 * 431 1953 * * 7798 2109 0 G 35 6637 * 3554 4806 * 1750 4361 * 3143 4952 6349 2642 5789 4212 4464 4130 5844 6236 * * 35 43 5097 * 1173 846 * * 7795 2207 0 I 36 4974 4297 6239 * 4272 * 6916 1849 6100 3226 4987 * 5753 5108 5667 4320 4051 2301 * 4927 36 41 5891 6453 0 * * * 7798 1219 0 P 37 4360 * 3119 3081 * 6172 5893 * 4779 4680 * 6492 1362 3964 * 3643 4808 5494 6691 * 37 0 * * * * * 0 7778 0 1000 P 38 3210 * 6888 5243 6479 * 4922 3585 5455 5719 4790 6746 1787 4688 4949 3934 3735 2968 * 6250 38 0 * * * * 0 * 7778 0 1000 D 39 3963 * 3017 2194 6695 3626 6226 * 3599 6519 * 2813 * 5838 5541 2571 5260 6909 * 6322 39 14 6678 * 1000 1000 * * 7798 1000 0 Q 40 4523 * 2792 3300 4988 5523 5753 5489 3072 3841 * 3316 * 3683 2821 4218 4759 5850 * * 40 0 * * * * * * 7798 0 0 Q 41 6395 5482 * * 4652 * 6181 3103 * 3220 3383 * * 1102 * 4265 * 4038 * 6179 41 14 6695 * 1585 585 * * 7798 1000 0 R 42 6271 6100 6821 4946 5364 7079 4620 4107 2353 5164 5954 5736 * 4904 1632 5356 4769 3323 5302 * 42 12 6926 * 2000 415 * * 7798 1000 0 L 43 * * * * 3979 * * 2329 * 681 5944 * * * * * * 4140 5121 6379 43 18 6352 * 1000 1000 * * 7798 1000 0 I 44 6607 5681 * * 2786 * 6702 2183 6708 2773 4814 6385 * 6482 6281 5650 4345 2348 * 3286 44 0 * * * * * * 7798 0 0 F 45 6547 5432 * * 1988 6405 3227 5850 4969 3445 * 6909 * * * 5587 5708 6377 5028 1461 45 50 4867 * 1527 615 * * 7798 2759 0 A 46 3594 * 3536 5588 * 3253 6281 * 2403 5941 5366 2388 * 3345 3552 3698 * 6499 * * 46 36 5351 * 0 * * * 7798 1775 0 G 47 5898 * 3518 4864 * 520 * * 4742 * 6639 4560 6802 6379 5647 5374 * * * 6695 47 122 3624 * 604 1548 * * 7798 3991 0 K 48 6405 * * 5706 * 6400 5035 3774 1629 4519 5809 4881 * 3142 2538 5322 3865 4167 * * 48 600 1555 * 351 2213 * * 7798 6596 0 Q 49 * * * 2967 6583 * * 5494 * 841 5146 6797 6453 4419 3998 6653 5930 3501 6876 * 49 154 3306 * 944 1058 * * 7798 4212 0 E 50 6875 * 3281 2913 * 6988 6662 5501 2769 1562 5750 5392 * 3570 4151 * 5545 6201 * 6281 50 204 2924 * 761 1287 * * 7798 5028 0 D 51 6094 * 694 4362 * * * * 5449 * 6181 2563 5155 6354 * 4085 6226 * * * 51 63 4552 * 277 2518 * * 7798 2812 0 G 52 4522 * 1883 2969 * 3650 4253 * 4737 * * 2988 6722 6499 5763 2503 5279 5579 * * 52 128 3561 * 168 3185 * * 7798 4135 0 R 53 4069 6395 3497 4822 4855 4507 4973 6094 1816 4899 4352 4490 * 3722 4549 3681 4606 5759 6324 * 53 38 5283 * 0 * * * 7798 2343 0 T 54 5943 6804 5122 6377 * * 6697 5020 3685 3935 5776 4987 4211 5369 6201 2810 1199 5502 * 6835 54 81 4189 * 215 2850 * * 7798 3423 0 L 55 * * * * 4709 * * 2533 * 579 4502 * * * * 6222 * 4324 6352 * 55 19 * 6288 * * * * 7798 0 0 S 56 3012 6382 4440 3019 6336 3826 5187 6198 3397 * * 4678 6460 3473 4164 2378 4418 6976 * 4952 56 13 6836 * 0 * 0 * 7771 1000 1000 D 57 3695 * 1973 2221 4971 6387 5862 6734 5514 * 4352 6821 * 3634 * 2426 6226 * * 5418 57 20 * 6201 * * * * 7798 0 0 Y 58 4702 2428 * 5653 4921 * 5171 5115 * 2648 6443 4778 * 4477 5400 6674 * 4618 * 1558 58 14 6665 * 2322 322 0 * 7763 1000 1000 N 59 5168 * 3326 5814 * 1178 5551 * 2968 6354 * 2552 * 4333 6122 5886 * * * * 59 13 6856 * 0 * * * 7798 1000 0 I 60 5079 * * * 5145 * * 1200 * 2141 * * * * * * * 1835 * * 60 12 * 6879 * * * * 7781 0 0 Q 61 4774 5273 6801 3634 6536 4342 5254 5631 2173 5551 6236 5589 5385 3076 3873 3584 2824 5102 * * 61 27 6881 6649 0 * 0 * 7781 1000 1000 K 62 6775 * 1541 2507 5245 5925 5238 * 4605 * * 3085 3210 5404 5183 3578 * * * * 62 20 6218 * 2585 263 * 0 7773 1000 1000 E 63 * * 2597 5990 * 1212 4152 * 4447 6369 5496 2861 * 5157 4375 5946 5583 * * * 63 60 4609 * 0 * 0 * 7755 2413 1000 S 64 3300 3947 2420 5466 * 6675 5543 * 6273 * * 5856 * * * 1274 2946 5687 * * 64 198 3085 6575 313 2357 * * 7708 3846 0 T 65 6478 * * 6368 4439 * * 2569 3942 3347 5251 5307 * * 4908 5093 2008 2164 * 6274 65 169 4257 4099 0 * 0 * 7531 2103 1000 H 66 * * * * 2842 * 2406 3360 * 2197 5916 5869 * 5845 * * 5711 2187 * 3908 66 101 3886 * 0 * 544 1671 7108 2727 2297 L 67 6026 * 5996 * 6261 * 3680 2685 * 1368 3504 * * * * 6153 4815 2620 * 4858 67 22 6057 * 2000 415 * 0 7164 1000 1000 V 68 4757 5354 * * 5985 * 5748 3433 * 2288 * * * 4770 * 5630 4593 1096 * 4616 68 0 * * * * 0 * 7164 0 1000 L 69 5559 * 4774 4936 * 5221 * 2045 * 1670 3624 * * 5917 * 5677 * 2390 * 5784 69 0 * * * * * * 7027 0 0 R 70 4727 * * 4062 * 5358 5388 5457 2655 * 5312 4031 4193 4508 1125 5105 * * * * 70 0 * * * * * * 6718 0 0 L 71 * * * 3015 * 4573 * 4348 4508 1118 3512 * * * * 3105 * 3708 * * 71 0 * * * * * * 6168 0 0 R 72 * * * * 3959 * * * 2236 3006 * * 4027 * 1044 * * 4251 * * 72 0 * * * * * * 5630 0 0 G 73 * * * * * 261 * * * * * 3652 * 3541 * * * * * * 73 0 * * * * * * 4437 0 0 G 74 * * * * * 0 * * * * * * * * * * * * * * 74 0 * * 0 * * * 4255 0 0 //