HHsearch 1.5 NAME d1nega_ FAM FILE d1nega_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1nega_.a3m DATE Tue Mar 9 07:23:11 2010 LENG 65 match states, 65 columns in multiple alignment FILT 122 out of 2666 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.0 EVD 0.4652 1.6688 SEQ >ss_dssp CCEEEESSCBCCSSTTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECCTTSCCCCC >sa_dssp EDDABACDDBECEDEEBACBEDDCEACBDDDEDEDDCDADBEEDDBCABCEDBEDCCEEEEDEEE >ss_pred CCEEEECCCCCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCEEEEEECCEEEECCCCCCCCCC >ss_conf 90999822527878967428179889999857898499998996999960219996888778879 >Consensus xxxxxalxxfxxxxxxeLsxxxGdxixvxxxxxxxWxxgxxxgxxGxxPxxyvxxxxxxxxxpxf >d1nega_ KELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLAAAWSHPQF >UniRef50_A8QGV6(83-152:633) Variant SH3 domain containing protein n=1 Tax=Brugia malayi RepID=A8QGV6_BRUMA E=0.0002 s/c=0.68 id=22% cov=97% -RWFVALFDYSHHmspnanaQQEELSFRKHQLIKVFGDVDQDgFYTGQIGHRIGLVPSNMVIEIAKDDLMP-- >UniRef50_B3RPW2(273-332:393) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RPW2_TRIAD E=9e-06 s/c=0.85 id=20% cov=91% -QTLVALYDLDADTQDKLALHEGDNIKTLGQPANGWQYGtnTNTGRSGWFPLTYTGRESPS------ >UniRef50_C3Y473(423-482:1604) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Y473_BRAFL E=2e-05 s/c=0.84 id=17% cov=92% -KYARALFEFEPSVEADIRLVPDQLYRIIRVVDKDWMEVQDEaGQAGVCPASYLHIMDGSY----- >UniRef50_A2AV32(526-588:1800) Novel protein similar to vertebrate SH3 and multiple ankyrin repeat domains 2 (SHANK2) n=1 Tax=Danio rerio RepID=A2AV32_DANRE E=2e-11 s/c=1.12 id=19% cov=98% RHYVVVK-SYQPQAEGEIVLYKNDRVKVLSIGEGGFWEGSARGNVGWFPAECVEEIPSKPNEDR- >UniRef50_Q29CU6(109-173:297) GA13993 n=10 Tax=Neoptera RepID=Q29CU6_DROPS E=5e-10 s/c=1.01 id=22% cov=100% -EKVVGKFDFVGSDQDDLPFQRGEVLTVIRKDEDQWWTARNsSGQVGQIPVPYVQRYEDATDEDGF >UniRef50_A9UY26(10-46:1291) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UY26_MONBE E=0.0005 s/c=1.23 id=23% cov=54% ------------------------IIRISEIVNDEWRKGVLGDEEGIFPISFVEDVPP------- >UniRef50_UPI000180BBDB(9-88:1063) PREDICTED: similar to ABL1 n=1 Tax=Ciona intestinalis RepID=UPI000180BBDB E=1e-06 s/c=0.68 id=21% cov=102% EEFFVVLYPIESAGRNQLSLRKGCQLRVLRYNGtEEWCEAKvlstgdpsdnakcaVVGSVGWVPSNYITPATSLNMHTWY >UniRef50_UPI000186D3BD(184-250:709) serine/threonine-protein kinase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186D3BD E=5e-06 s/c=0.78 id=22% cov=91% -----VIFDFKAVRPDDLHVKTGDHVIIVEHNSKRGYLVKLyyedgfsTGPEGWVPAHCLSPLVENQRKP-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * 2658 * * * * 2762 * * * * 1678 1390 * * * * * 1 0 * * * * * * 5434 0 0 E 2 4926 * 3177 2090 * * 5874 * 2194 * * 4714 4972 3159 2566 * 4823 * * * 2 0 * * * * * * 6325 0 0 L 3 * 5121 * * 3393 * * 2962 6170 2684 4078 * 5890 5436 5148 * 3771 2480 5900 2461 3 0 * * * * * * 6652 0 0 V 4 2699 4273 * * 2761 5421 * 5049 * 3845 5355 * * * * * * 1314 * 3366 4 0 * * * * * * 6752 0 0 L 5 * * * 3930 * * * 2645 4087 4759 * * * 3724 1911 * 4573 1869 * 5555 5 0 * * * * * * 6953 0 0 A 6 653 4549 * * * 5778 * 5639 * 6627 * * * * * 4529 5188 2305 * * 6 11 * 7066 * * * * 7000 0 0 L 7 5654 * * 4701 5866 * * 2463 3310 1330 3947 5200 * 6532 6013 6739 7009 3195 * * 7 11 * 7053 * * 0 * 7008 0 1000 Y 8 4071 * 5786 4316 2333 6607 3072 6407 4413 6615 5824 6205 * 5123 5441 5028 5556 5869 5028 1771 8 16 6475 * 2000 415 0 * 7011 1000 1000 D 9 3457 * 1376 3626 * * 6309 * 6115 * * 3584 3488 5899 6677 2481 4740 * * * 9 0 * * * * * * 7022 0 0 Y 10 * 6776 * 6373 1188 * 3778 6636 * * * 5759 * * * * * * 5790 1250 10 38 5268 * 1003 997 * * 7045 2153 0 Q 11 5042 * 3320 2538 * 6465 * 5463 3858 5372 6718 4569 5478 3824 5010 3133 2778 3344 6723 5221 11 9 7267 * 1000 1000 * * 7045 1000 0 E 12 1554 * * 7379 * 3166 6402 * 4769 6617 * 5747 2360 5444 5445 2794 4585 5979 * 5497 12 31 5556 * 2086 388 * * 7045 2137 0 K 13 4167 * 3416 3362 * 4989 4603 * 3356 7054 5486 5310 5551 2707 3065 3060 3930 4658 * 6820 13 81 4195 * 2294 329 * * 7045 3249 0 S 14 3223 5638 2266 3648 * 3273 5534 6185 5960 6397 6215 2990 5036 4352 4849 3199 6718 5200 * 5677 14 9 7282 * 0 * * * 7045 1000 0 P 15 4194 * 2419 3025 5114 3770 5647 4852 4243 * * 5139 2434 4040 5909 3771 4469 5909 * * 15 28 5702 * 1000 1000 * * 7045 1085 0 R 16 4980 5800 1714 2859 * 2623 4537 * 5935 * 6691 3639 6727 5184 4623 4396 4601 5067 * * 16 16 6525 * 1000 1000 * * 7045 1000 0 E 17 5858 4742 2571 877 6959 5515 5611 * 6877 5001 * * * 3542 5568 * 5746 5883 * * 17 74 4317 * 1755 507 * * 7045 2993 0 V 18 6650 * * * * * * 2681 * 501 3924 * * * * * * 4023 * * 18 0 * * * * * * 7049 0 0 T 19 4137 6696 4527 4788 7139 4708 5933 * 6463 6791 5118 4126 3466 5978 5466 1329 2721 7147 * * 19 0 * * * * * * 7049 0 0 M 20 4812 5916 * * 1317 * * 3190 * 1946 4661 * * * * 6691 * 2965 * * 20 0 * * * * * * 7049 0 0 K 21 4174 * 5364 3873 5892 7294 5014 5614 2205 4353 6294 4810 4537 2810 2678 5333 5126 4039 * 7147 21 0 * * * * * * 7049 0 0 K 22 3161 5300 5927 2509 * * 7084 4821 1769 6525 6608 * 4045 4005 3481 6258 4921 4184 * * 22 0 * * * * * * 7049 0 0 G 23 6608 * 3265 * * 432 5838 * 6567 * * 3201 * * * * * * * 7004 23 0 * * * * * * 7049 0 0 D 24 4845 5928 911 1874 * * * * 5974 7068 * * * 3263 * 7169 * 6700 * * 24 21 6094 * 0 * * * 7049 1718 0 I 25 3901 6556 * 3866 5692 6747 5428 2591 4169 3431 5964 * 5425 4431 3492 6950 4372 2233 * 4501 25 0 * * * * * * 7048 0 0 L 26 5745 * * * 3870 * * 1616 * 1876 4786 * * * * * * 2163 6571 4496 26 0 * * * * * * 7048 0 0 T 27 6019 5111 5358 2977 4635 6698 4868 3302 3229 3845 5822 * * 3569 3349 6062 3015 4299 * 4240 27 0 * * * * * * 7048 0 0 L 28 4895 5316 * 5713 * * * 2027 * 2070 * * * * * * 7095 1253 * 6392 28 55 4753 * 2565 267 * * 7048 2862 0 L 29 4925 6528 5401 5351 4442 * 5218 2754 5546 1428 6571 5929 * 6967 5463 5555 3609 3073 * 6122 29 108 3791 * 666 1435 * * 7048 3787 0 N 30 5324 * 2643 1930 6404 3413 5927 * 2934 5921 * 4205 6073 4907 3937 3809 7104 5208 * 6693 30 56 4726 * 780 1259 * * 7048 3034 0 S 31 5371 5932 3241 3000 * 4555 4113 4036 2810 5798 5664 4420 6927 3502 3982 4449 3992 5292 * 4428 31 37 5314 * 2385 307 * * 7048 2287 0 T 32 4636 * 3273 4570 5919 4310 4901 3927 4725 3761 * 3942 4493 5696 4970 2691 3880 3192 7041 4790 32 94 4527 5672 1188 833 * * 7048 3083 0 N 33 6935 5175 1965 2796 * 3687 6673 6527 4823 6738 6861 2585 4646 5882 4853 3327 4433 6914 * * 33 112 4130 5836 683 1407 0 * 7035 3308 1821 K 34 4426 7473 2190 2948 * 3363 6000 6510 3331 * 6699 3018 3734 4497 6089 3607 6048 6450 * * 34 50 4869 * 1924 441 0 * 7032 2991 1682 D 35 * * 2328 3015 * 1236 4630 * 6026 5715 * 3736 * 6009 4798 5513 * * * 5088 35 28 5704 * 0 * * * 7048 1688 0 W 36 * * * * 4698 5636 * 6512 * * 6688 * * * 4979 * 4922 * 224 * 36 45 5535 6763 610 1536 * * 7048 1715 0 W 37 4862 4517 * * 3798 * 5829 4124 * 3396 3807 * * 6953 7821 5190 5334 5480 1279 3192 37 0 * * * * 0 * 7035 0 1000 K 38 6512 * 5450 3065 4921 * 5822 4190 2855 2855 4687 7114 7057 4600 3531 6270 4638 3906 4167 3212 38 0 * * * * * * 7048 0 0 V 39 2606 4047 * * * 1143 * 5326 * 6533 * * * * 5450 * * 1922 * * 39 111 3753 * 1403 686 * * 7048 3976 0 E 40 6853 5247 5696 2117 6201 * 4467 5681 3003 5290 6168 7023 * 3335 2217 4329 5249 4306 * 5367 40 140 3431 * 1804 487 * * 7048 4343 0 V 41 4509 3952 3871 5782 4265 7225 4955 3750 3916 2788 7144 2464 6688 * 3982 5045 7148 3518 * 4546 41 394 2064 * 1420 675 * * 7048 5691 0 N 42 4342 * 3162 4549 6693 2800 5112 7043 4444 5207 * 2617 * 4648 4161 4232 2242 6645 * * 42 160 3256 * 1187 835 * * 7048 4819 0 D 43 6221 * 3323 3907 * 917 6590 * 4947 6129 * 3373 6853 4487 5506 4523 5786 * * * 43 70 4409 * 1809 485 * * 7048 3317 0 R 44 4263 4580 5309 3002 * * 6798 5705 2483 5465 * 4253 6746 2567 2604 3706 4831 5667 * * 44 34 5434 * 1706 528 * * 7048 2150 0 Q 45 3780 * * 3045 5456 * * 3432 3600 6569 6003 5662 5244 3657 2629 3561 3961 2945 * 5949 45 9 7367 * 0 * * * 7048 1000 0 G 46 6584 6530 * * 4960 79 * * * * * * * * * * * * * * 46 0 * * * * * * 7048 0 0 F 47 6145 * 6748 * 2807 6823 * 3354 7164 1914 6727 7070 * 6856 5119 6465 5489 5373 2584 2507 47 0 * * * * * * 7048 0 0 V 48 4639 5337 * * 1542 * * 2573 * 3646 * * * * * * * 1598 * 6221 48 0 * * * * * * 7048 0 0 P 49 * * 6382 * 6404 6774 * * 5622 5707 * * 159 6581 6479 * * 6635 * * 49 9 7389 * 1585 585 * * 7048 1000 0 A 50 1973 6184 * 4680 4379 3982 * 4539 3384 5459 5697 4967 6633 * 3571 2413 4351 4746 * * 50 0 * * * * * * 7048 0 0 A 51 4127 5394 4031 4266 6700 5982 6746 * 6845 7012 6771 2018 6856 4628 4658 1834 3510 5338 7049 6747 51 13 * 6823 * * * * 7048 0 0 Y 52 6026 3706 * * 2497 6692 3145 5361 6396 5720 4916 * * * 5389 * 6020 5780 * 1113 52 24 5932 * 2426 297 0 * 7045 1723 1000 V 53 5346 4794 * * 5801 * * 3207 * 2350 5555 * * * * * 3749 940 * * 53 48 4935 * 2203 353 * * 7048 2662 0 K 54 4228 6056 4164 1866 6809 4898 6174 6580 2623 * 5201 * * 3450 2960 4264 4857 5088 * 6735 54 22 6901 7250 2322 322 * * 7030 1000 0 K 55 5073 * 4979 2738 5847 * 6636 2530 3315 3686 5617 * 2752 5283 3925 5362 6367 3143 * * 55 17 6382 * 2000 415 0 * 7026 1000 1000 L 56 3590 6889 * 6045 6789 7149 6940 2196 5952 2411 4946 5937 * 4812 4545 5403 4444 2182 * 5077 56 27 5775 * 1585 585 * * 7137 1669 0 A 57 3579 * 3179 3331 * 3368 5458 6728 4143 6267 5189 5033 3142 4922 * 2962 3145 4002 * * 57 27 5773 * 1585 585 * * 7146 1670 0 A 58 3212 * 3982 2460 6202 3612 4926 5467 4988 5654 * 4028 2873 4820 4811 3305 3947 * * 6653 58 18 6309 * 1000 1000 * * 7146 1000 0 A 59 3116 * 3782 4473 6477 4525 * 4687 4035 2648 5776 4627 3610 5533 4235 3030 3508 6281 6124 * 59 0 * * * * * * 7148 0 0 W 60 * 6411 3720 2819 6275 4754 6259 6397 6557 4066 * 6213 2311 4423 5559 3396 3203 4877 4006 4545 60 29 6668 6636 0 * * * 7174 1000 0 S 61 3431 * 3045 3344 * 4899 * * 5127 4236 4575 4428 * 4626 4718 1873 3581 4755 * 6381 61 0 * * * * 0 * 7056 0 1000 H 62 3864 * 4768 2713 * 5980 3321 4126 3962 4973 6009 4572 2778 3779 3320 4655 4820 * * 5538 62 31 5569 * 2322 322 * * 7039 1000 0 P 63 3922 * 3529 4797 * * * 5819 * * * * 598 6088 6319 4181 4875 5911 * * 63 0 * * * * * * 6815 0 0 Q 64 * * * 2955 * 5395 * 5482 4351 5567 * * * 1486 2938 4544 4486 * 2980 4235 64 0 * * * * * * 6393 0 0 F 65 * * * * 718 * * * * * * * * * * * * * * 1350 65 0 * * 0 * * * 5218 0 0 //