HHsearch 1.5 NAME d1mnta_ FAM FILE d1mnta_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1mnta_.a3m DATE Tue Mar 9 00:55:26 2010 LENG 66 match states, 66 columns in multiple alignment FILT 57 out of 61 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.4 EVD 0.4416 1.4276 SEQ >ss_dssp CCSSCCCCCCCCHHHHHHHHHTHHHHTSCTHHHHHHHHHHHHHCCCCSSSCCCSHHHHHHHHHHTC >sa_dssp EEEEEEEEEECEEEDDDECDEEAEDDEDEBEDBCDDCDEDCEEDEDEEEDEEEDDEEDDDEEDEEE >ss_pred CCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC >ss_conf 987885157669899999999999809971399999999972253551033213788635565309 >Consensus sRxdxqfxlRlPxeLrxxixxxAxxnxRSmNaEIVxrLexsxxxxxxxxxxxxxAxxlaxxxxexx >d1mnta_ ARDDPHFNFRMPMEVREKLKFRAEANGRSMNSELLQIVQDALSKPSPVTGYRNDAERLADEQSELV >UniRef50_A9G1L3(6-62:104) Putative uncharacterized protein n=2 Tax=Rhodobacteraceae RepID=A9G1L3_9RHOB E=4e-09 s/c=1.10 id=33% cov=88% AQNQDKFIVRLPDGLRDRIRLAAEANHRSMNAEVVALLEENYPAPVPEK-LEDPAARL-------- >UniRef50_A4TJE2(38-103:179) Phage regulatory protein n=10 Tax=Yersinia pestis RepID=A4TJE2_YERPP E=7e-15 s/c=1.23 id=34% cov=98% SREDPQLRIRLPVELKEKIEGSAKENNRSMNAEIVQRLDASYLSEFPEDGVLSakDALQIANNAKE-- >UniRef50_C6B7L8(2-51:90) Arc domain protein DNA binding domain protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B7L8_RHILS E=1e-09 s/c=1.28 id=30% cov=76% -RGDPHFRLRLPEDLKREIETAARANSRTITSEVVYRLEQSFARSSTYQG---------------- >UniRef50_D2TY02(5-49:79) Putative uncharacterized protein n=1 Tax=Arsenophonus nasoniae RepID=D2TY02_9ENTR E=2e-06 s/c=1.19 id=38% cov=68% --DIAPFGVRMTTELKDRLHEEARRNTRSLNSEIVKRLEDSLSKEN-------------------- >UniRef50_A4V765(12-77:110) Putative transcriptional regulator n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V765_PSEFS E=1e-14 s/c=1.22 id=28% cov=102% SRTADKFVVRLPDGMREQIADIAKVHHRSMNSEIIARLETSLAEESQAAAIQVDASSLTAGEKQLI >UniRef50_B7MGW8(26-81:96) Putative phage regulatory protein n=15 Tax=Enterobacteriaceae RepID=B7MGW8_ECO45 E=5e-09 s/c=1.11 id=38% cov=85% ---------RIPESLREALAVRASKNGRSVNSEIVMILQAAIDEDRSPKSVESFAQQEADKFKE-- >UniRef50_D0SJK8(13-66:121) Predicted protein n=1 Tax=Acinetobacter junii SH205 RepID=D0SJK8_ACIJU E=2e-08 s/c=1.11 id=26% cov=82% --------LRVSPELKQKIAISAKAYNRSMNADMVARLEQSFDNESEYSPLRFSDEELAEK----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 1517 * * * * * * * * * * * * * * 620 * * * * 1 0 * * * * * * 2991 0 0 R 2 * * * * * * * * 2670 * * * * 3405 418 * * * * * 2 0 * * * * * * 3334 0 0 D 3 4782 * 1536 2441 * 4334 * * 2989 * * 5169 * 4792 * 4610 2696 * * * 3 0 * * * * * * 3439 0 0 D 4 3464 * 1031 3610 * * * 3861 5799 5484 4514 4093 * 4550 4571 5407 * * * 5776 4 0 * * * * * * 3487 0 0 P 5 2983 * 1883 5340 * * 5348 * * * * * 1121 * * 5636 4959 4603 * * 5 0 * * * * * * 3521 0 0 H 6 * * * * * * 3596 * 1935 * * * 3543 902 4845 * * * * * 6 0 * * * * * * 3585 0 0 F 7 5154 * * * 670 * * 5272 * 4237 4761 * * * * * * 4532 * 2438 7 0 * * * * * * 3610 0 0 N 8 * * * * 6031 4113 5612 3795 2438 * 3850 1836 5232 4620 4290 5353 * 2666 * * 8 0 * * * * * * 3610 0 0 F 9 * * * * 3399 * * 2679 * 895 * * * * * * * 2242 * * 9 0 * * * * * * 3630 0 0 R 10 * * * * * * * * * 5136 * * * * 83 * * * 5179 * 10 0 * * * * * * 3569 0 0 M 11 * * * * 3291 * * 3250 * 1365 2063 * * * * * * 3731 3476 * 11 0 * * * * * * 3566 0 0 P 12 * * * * * * * * * * * * 149 * * 3733 5440 * * * 12 0 * * * * * * 3566 0 0 M 13 4192 * 2416 2233 * 5435 5927 5145 5311 5680 5581 * 2988 3582 4813 4615 4699 3760 * 6202 13 0 * * * * * * 3566 0 0 E 14 * * 2634 1034 * 1828 6011 * * * * * * * * 5996 5841 * * 5621 14 0 * * * * * * 3566 0 0 V 15 * * * * * * * 4790 * 528 2362 * * * * * * 3718 * * 15 0 * * * * * * 3566 0 0 R 16 * * * * * * 3957 * 1366 4813 * * * * 966 * * * * * 16 0 * * * * * * 3566 0 0 E 17 3293 * 1602 1909 * 5338 * * 5354 * * 3283 * 3628 4122 * 6373 * * * 17 0 * * * * * * 3566 0 0 K 18 2851 * * 3933 * * * 5311 2039 3528 * * * 2531 2064 * * * 5133 * 18 0 * * * * * * 3566 0 0 L 19 * * * * * * * 1203 * 1816 * * * * * * * 1828 * * 19 0 * * * * * * 3566 0 0 K 20 2515 * * 1803 * 6556 4384 5805 2109 * 4727 5841 * 5659 3785 4605 4585 * * * 20 0 * * * * * * 3566 0 0 F 21 2724 * 4154 1717 5581 5156 5435 5578 3714 4651 * 4044 * 3245 5337 5133 4936 5193 * * 21 0 * * * * * * 3566 0 0 R 22 1629 * 6011 2948 * * * 4814 5957 3975 5659 * * 5133 2576 3457 * 3727 * 4887 22 0 * * * * * * 3566 0 0 A 23 40 * * * * * * * * * * * * * * 5200 * * * * 23 0 * * * * * * 3566 0 0 E 24 4613 * 6373 2220 * * * * 1390 4277 * 3799 * 4356 3468 4312 4720 * * * 24 0 * * * * * * 3566 0 0 A 25 1784 * 3591 2739 * * 5957 * 3013 6630 5927 4483 * 4795 2585 4922 * 5064 * * 25 0 * * * * * * 3566 0 0 N 26 * * 4941 4185 * 6039 4692 * * 5859 * 540 * * 4484 3732 6319 * * 5578 26 0 * * * * * * 3566 0 0 G 27 * * * 4941 * 1080 2736 * 3375 * * 2798 * * * 4588 3997 * * * 27 0 * * * * * * 3566 0 0 R 28 * * * * * * * * * * * * * 5462 84 * 4887 * * * 28 0 * * * * * * 3566 0 0 S 29 * * * * * * * * * * * * * * * 72 4364 * * * 29 0 * * * * * * 3566 0 0 M 30 4214 * * * 5330 * * 2814 * 2732 1070 * * 4288 * * * 3308 * * 30 0 * * * * * * 3566 0 0 N 31 * * * * * * 5337 * * * * 236 * * * * 2989 * * * 31 0 * * * * * * 3566 0 0 S 32 957 * * * * 4295 * * * * * 5435 * 4124 * 1646 4887 * * * 32 0 * * * * * * 3566 0 0 E 33 * * 4231 129 * * * * * * * * * * * * * 4941 * * 33 0 * * * * * * 3566 0 0 L 34 5808 * * * 4292 * * 663 * 3634 3762 * * * * * * 2782 * * 34 0 * * * * * * 3566 0 0 L 35 * * * * * * * 2317 * 3050 * * * * * * 5354 693 * 4813 35 0 * * * * * * 3566 0 0 Q 36 1346 * 4775 * 5829 * 3825 4783 4593 5357 4044 5377 * 2786 4828 5826 5345 * * 3781 36 0 * * * * * * 3565 0 0 I 37 2895 * * * * * * 2880 * 3631 5902 * * * 784 * 5926 4828 * * 37 0 * * * * * * 3565 0 0 V 38 * * * * * * * 2668 * 382 * * * * * * * 3732 * * 38 0 * * * * * * 3565 0 0 Q 39 5064 * 6318 641 * * * * 6032 5646 4843 5931 * 2487 4279 * * * * * 39 0 * * * * * * 3565 0 0 D 40 3034 * 2276 2019 * * 5069 * 4009 * * 4702 * 3418 3293 4979 5196 5199 * 6297 40 0 * * * * * * 3553 0 0 A 41 2454 5862 * 3681 * * * * 5811 * * 6109 * * * 804 3655 * * 4727 41 0 * * * * * * 3556 0 0 L 42 * * * * 1476 * * 3907 4651 1579 * * * * * * * 3215 * 3446 42 0 * * * * * * 3547 0 0 S 43 2257 * 3060 3914 * * 3571 * 3401 3607 * * 3041 * 3840 2913 5680 * * * 43 0 * * * * * * 3563 0 0 K 44 3075 * * 2563 4796 3745 * 4232 1928 * * 4418 5185 * 2947 3614 * * * * 44 0 * * * * * * 3582 0 0 P 45 * * 3735 1775 * * * * 4989 * * * 2280 2289 5344 4283 4426 3877 * * 45 0 * * * * * * 3471 0 0 S 46 3699 * 4286 4060 4818 * * * 5021 4794 * 3805 5081 5248 4660 1321 4426 4859 4028 * 46 0 * * * * * * 3475 0 0 P 47 * * 4719 3837 4734 * * * * * * 3600 1468 2680 * 2691 3328 * * * 47 0 * * * * * * 3525 0 0 V 48 2064 * * 2528 * 4505 * 4441 * 3555 * * 4241 * * * * 2271 * 2716 48 0 * * * * * * 3430 0 0 T 49 2879 * 3406 * * * 4472 * 3215 4096 * * * 3632 * 2471 1749 * * * 49 102 * 3872 * * * * 3348 0 0 G 50 3554 * * 2770 * 1252 * * * * * * 3333 * * 3474 * 2653 * * 50 0 * * * * 0 * 3109 0 1000 Y 51 * * * * 3622 * * 2386 * 2257 * * * * * * * 1855 * 2048 51 122 3622 * 0 * * * 3119 1000 0 R 52 * * * 2395 * * * 2507 * 2559 * * * 2386 1873 * * * * * 52 0 * * * * * * 3119 0 0 N 53 3388 * 1584 * 3000 * 3606 * * * * 3763 * * * 2363 * 3385 * * 53 134 3498 * 1000 1000 * * 3119 1000 0 D 54 * * 1208 3749 3240 * * * * 2493 * * 3569 * * 3000 * * * * 54 0 * * * * * * 3119 0 0 A 55 193 * 3000 * * * * * * * * * * * * * * * * * 55 0 * * * * * * 3119 0 0 E 56 3569 * * 1447 * 3606 * * 3622 3498 * * * 3240 * 3385 3388 * * * 56 0 * * * * * * 3119 0 0 R 57 * * * 3000 * * * * * 3606 * * * 2363 992 3385 * * * * 57 0 * * * * * * 3119 0 0 L 58 * * * 3240 * * * 3498 * 902 2401 * * * * 3622 * * * * 58 0 * * * * * * 3119 0 0 A 59 388 * * * * 3223 * * * * * * * * * * 2957 * * * 59 0 * * * * * * 2971 0 0 D 60 2957 * 1289 2008 * 3223 * * * * * 3236 * * * * * * * * 60 0 * * * * * * 2971 0 0 E 61 * * 3151 3547 * 2957 * * 1922 * * 3236 * 2351 * * * 3223 * * 61 0 * * * * * * 2971 0 0 Q 62 2774 * * 2531 2594 * * * * * * * * 957 * * * * * * 62 0 * * * * * * 2639 0 0 S 63 3095 * * * * * * * 1045 * * * * * * 1329 * * * * 63 0 * * * * * * 2639 0 0 E 64 * * 2559 663 * * * * * * * * * 2333 * * * * * * 64 0 * * * * * * 2514 0 0 L 65 * * * * * * * * * 546 1666 * * * * * * * * * 65 0 * * * * * * 1949 0 0 V 66 * * * * * * * 1513 * * * * * * * * * 622 * * 66 0 * * 0 * * * 1949 0 0 //