HHsearch 1.5 NAME d1l3ka2 FAM FILE d1l3ka2 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1l3ka2.a3m DATE Tue Mar 9 03:47:07 2010 LENG 79 match states, 79 columns in multiple alignment FILT 105 out of 7749 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 8.5 EVD 0.4315 0.8929 SEQ >ss_dssp CCSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHCSCCEETTEECEEEECC >sa_dssp ECDCABAADAEDEACDDCACDCADEBCEBEDCDCCDDEEEEECECCACACADDDDBACDACEDEEBEBDECEBDCDDBE >ss_pred CCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCEECCEEEEEEECC >ss_conf 9518996688698899999998731123332000136665432215899984069999999848969788799999749 >Consensus txrxifVxnLpxxxtexxlxxxFxxxgxxxxxxxxxxxxxxxxxxxafVxfxxxxxaxxalxxxxxxlxgrxixVxxAx >d1l3ka2 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKAL >UniRef50_Q8MYR4(679-760:918) SD14970p n=15 Tax=Diptera RepID=Q8MYR4_DROME E=4e-05 s/c=0.60 id=13% cov=95% ----LFLRNLNFKTVQETVEKHFRHLGsiHTVEIAKRRDPENPREFKslgYGFIQFKKSSVAEHALKnLQLTHIDGNPVELKRS- >UniRef50_A7TQR2(183-265:333) Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TQR2_VANPO E=3e-05 s/c=0.60 id=16% cov=95% ----VYCGYLPKNTTDADLREHFKDYNPQEIWIFrtraakgPMHLQLHRHYTAALITLNSPETiAKIAEVTSTKKILGKKISVKPA- >UniRef50_B2ASZ7(197-270:602) Predicted CDS Pa_6_11740 n=1 Tax=Podospora anserina RepID=B2ASZ7_PODAN E=9e-06 s/c=0.69 id=18% cov=91% ----IVIKNIPFNVRKEMLTSIMSDLGLPQPYAFNYHFDNGIFRGLAFANFQSPLDTQTVIEqLNGYEVQGRKLRV---- >UniRef50_B3RI83(267-350:759) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RI83_TRIAD E=8e-05 s/c=0.57 id=17% cov=91% ----LWIGGLQHKVRAADLKDKLSEYGKVISATIIISMKSLESKYYGHVQMARHKEAAECIAcLNNTNISGSVVTI---- >UniRef50_Q1HQQ8(181-261:433) Polyadenylate-binding protein-like protein n=2 Tax=Culicini RepID=Q1HQQ8_AEDAE E=0.0003 s/c=0.57 id=18% cov=92% ------VDNVDPKATKTELREYYNHFGTILGVSletndgslILTDKEYQKLSYvCCYIRFSRRSEAKAAREMHEYIFRDRKLRVELA- >UniRef50_Q8T6B9(225-304:637) Poly(U)-binding-splicing factor half pint n=15 Tax=Coelomata RepID=PUF68_DROME E=1e-06 s/c=0.68 id=18% cov=101% SFNRIYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIAsMNLFDLGGQLLRVGRSI >UniRef50_O01159(163-242:452) Probable splicing factor, arginine/serine-rich 7 n=2 Tax=Caenorhabditis elegans RepID=RSP7_CAEEL E=9e-07 s/c=0.68 id=15% cov=99% --RTVYVGNLPKGVDGNEVLELFNMYFGEVMYARMASGPDALPCAYAYVEFSQQASVCNALQNDGFEFKERPLKIqhsRVAI >UniRef50_UPI00017B29C7(7-84:331) UPI00017B29C7 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B29C7 E=1e-05 s/c=0.65 id=16% cov=94% --RELFivqVKGLPWSCTADDLLKFFSECRIRDGVKGIHLTVNRMGRPsgRAFIEMEHEEDVNKALEKHRQYLGPRYVEV---- >UniRef50_B7GAF3(251-329:330) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GAF3_PHATR E=8e-07 s/c=0.69 id=16% cov=100% TCTKLFAGNCSYEIDDDAItKFFGNVESEVKAVRWLHHKDSGDFKGCGYVEFWNTEACEKAATLNGKTLLGRPIRLDWA- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * 1966 426 * * * 1 0 * * * * * * 6030 0 0 V 2 4066 4255 * * 5136 4994 * 3066 5135 2913 2604 3607 * * * 4097 3608 2640 * * 2 0 * * * * * * 6923 0 0 K 3 * * 4851 * * * * * 2602 * * 2822 * * 1025 5037 2865 * * * 3 0 * * * * * * 7868 0 0 K 4 * 6332 * 5055 * * 6092 * 1644 * * 5441 * 5235 1621 4403 2315 * * * 4 36 5331 * 2000 415 * * 8152 1728 0 I 5 5593 * * * 5376 * * 1567 * 1523 5178 * * * * * * 2045 * * 5 0 * * * * * * 8516 0 0 F 6 * 6488 * * 1229 6799 6556 4567 * 5580 5602 * * * 6772 * 6691 4642 4757 1462 6 0 * * * * * * 8516 0 0 V 7 4647 6336 * * * * * 1648 * 3262 5517 * * * * * * 993 * * 7 17 6374 * 1585 585 * * 8516 1000 0 G 8 3957 * 5167 5001 5620 1191 * * 3406 * * 4866 * 5695 3302 3135 5656 5381 * 6475 8 19 * 6280 * * * * 8516 0 0 G 9 6491 * 4350 * * 1644 * * 4284 * 6405 1030 * 6693 5096 6772 * * * 5727 9 0 * * * * 0 * 8650 0 1000 I 10 * 5706 * * 6483 * * 1994 * 834 5127 * * * * * * 2955 * * 10 0 * * * * * * 8653 0 0 K 11 4437 5714 3115 6581 * 5762 5685 * 5090 6390 * 4767 1024 6722 * 2669 4860 * * * 11 16 6483 * 0 * * * 8653 1000 0 E 12 4191 * * 3861 3325 * 4720 5111 3646 4104 6762 6860 2697 4981 3411 4107 5516 5764 4225 3032 12 16 6489 * 2000 415 * * 8653 1000 0 D 13 4589 * 2636 3632 6483 4205 5172 5678 3517 6749 * 3067 6425 4676 4935 2694 3109 6902 7050 5755 13 0 * * * * * * 8659 0 0 T 14 4027 4591 * 6399 5154 * * 3029 * 3557 4050 * * * * 5298 2002 2014 5171 4680 14 0 * * * * * * 8659 0 0 E 15 6710 * 2902 4142 * 5305 * * 4294 6587 * 5079 6764 5318 4730 2699 1232 5563 * 6530 15 0 * * * * * * 8659 0 0 E 16 3673 * 2894 1476 * 6535 6611 5732 3998 6587 * 4596 7027 3548 4539 4864 4654 4474 5779 * 16 22 6072 * 2000 415 * * 8659 1000 0 H 17 4225 * 2384 1834 6566 * 5760 6783 3469 * * 4130 * 3196 6582 3506 5343 4725 * 5724 17 0 * * * * * * 8659 0 0 H 18 4314 * 1702 2409 * 6636 4177 * 4235 5629 5307 6646 * 3417 4892 4449 4498 5106 * 4891 18 0 * * * * * * 8659 0 0 L 19 * * * * 5243 * * 1989 * 1025 5017 * * * * * * 2327 * * 19 56 4710 * 846 1173 * * 8659 2416 0 R 20 4629 6971 * 3812 6656 5550 5711 4149 2205 3905 4665 6810 * 4227 2162 5440 4283 4023 * 5109 20 17 * 6431 * * * * 8659 0 0 D 21 4130 * 2525 2323 6570 5000 5252 6264 2854 * 6373 3362 6632 3960 3615 5071 5078 7076 * 5812 21 13 * 6801 * * 0 * 8639 0 1000 Y 22 3964 5569 5559 5827 1782 * 3567 3377 5042 2119 6608 * * 6670 * * * 4102 * 3928 22 16 6474 * 2000 415 0 * 8654 1000 1000 F 23 5246 6494 * * 598 5303 * 4429 * 3035 4138 * * * * 5817 * 5440 6597 * 23 52 4810 * 2084 388 * * 8659 2799 0 E 24 3805 * 5099 2651 6431 4588 * 5648 3559 5691 6764 3331 * 4270 4266 1879 4613 5227 * 6514 24 30 5622 * 2752 232 * * 8659 1794 0 Q 25 3720 * 4088 3588 6782 3910 5504 * 3029 5210 5162 3800 4167 2687 4011 3558 5100 5036 * 5817 25 15 6587 * 0 * * * 8659 1000 0 Y 26 5556 3699 6740 4749 1991 5124 5705 3766 5727 4192 * * 6819 5695 5578 6483 4492 3466 6604 2300 26 25 5869 * 2798 224 * * 8659 1778 0 G 27 4519 6588 4574 5790 4869 688 6611 * 4718 4994 5714 5124 5123 * 6475 5699 6802 5930 * 5718 27 42 5107 * 1017 984 * * 8659 2365 0 K 28 5773 5365 3410 3588 6779 3873 5470 3698 3486 5796 6573 4375 2968 4732 3567 4193 3414 5144 * 6531 28 27 5749 * 2322 322 * * 8659 1720 0 I 29 5157 4498 5838 3882 * 6618 6749 2373 4645 3146 5632 5178 4010 * 6475 5018 4693 1896 * 5831 29 45 5010 * 1154 861 * * 8659 2409 0 E 30 6140 * 3844 2826 6668 6587 * 3014 3217 3314 6710 5673 * * 4143 3539 4059 2561 * 5517 30 13 6779 * 0 * * * 8659 1000 0 V 31 4607 6483 3254 3332 6641 4755 3854 5642 3963 5719 5618 4136 4784 4300 4031 2672 4820 3872 * 4710 31 15 6614 * 2322 322 * * 8659 1000 0 I 32 4130 3958 6733 4720 4132 4825 5687 2921 * 4896 4101 5552 4660 4758 4509 5655 4791 2345 4436 4188 32 13 6807 * 2322 322 * * 8659 1000 0 E 33 4460 5594 4293 4475 5076 5608 4245 3199 3246 5757 6598 4213 4506 3904 3443 4153 4720 3120 7120 5729 33 10 7124 * 2322 322 * * 8659 1000 0 I 34 5656 * 5614 * 3848 5575 4968 2288 4538 2368 3992 4846 4893 6587 3762 4955 5646 3395 6579 5463 34 28 6857 6522 1585 585 * * 8659 1000 0 M 35 4433 5334 4762 6886 4041 5040 6604 2826 4068 3809 3866 4514 3652 4857 3966 5081 5248 2903 5650 6592 35 27 5767 * 592 1570 0 * 8633 1792 1000 T 36 5001 5270 4176 4056 4577 5276 5721 3750 3281 3809 5107 5879 4606 4775 2703 5226 3678 4085 * 4284 36 41 5699 6822 1379 700 * * 8659 1645 0 D 37 5594 5140 1648 4780 6510 5189 4242 5059 3178 5504 6725 3497 4984 5725 3866 4150 5164 6848 * 4974 37 44 5067 * 2556 269 * 0 8653 2363 1000 R 38 4550 6804 3519 4105 5253 5766 5853 4596 2095 5861 5750 5577 2738 4122 3050 4537 5795 6666 * 6639 38 70 4706 6746 3369 147 * 0 8653 2616 1000 G 39 5113 6675 2949 3381 5660 4329 5240 5188 3159 5584 * 3249 5558 3260 3847 4055 4047 5774 6478 5097 39 72 4993 5852 2217 349 * 0 8651 2344 1781 S 40 4711 6542 3917 3880 5624 3698 6987 5718 4204 4922 6413 3940 4269 5829 6752 3171 1656 * * 5529 40 43 5680 6625 2166 364 1008 992 8649 1744 2813 G 41 5708 6398 4741 5690 6920 1904 3908 * 3120 5694 * 3830 5186 5103 2959 3572 4757 5688 6695 5048 41 0 * * * * 0 * 8655 0 2333 K 42 3851 * 5098 5124 * 4090 5056 5705 2339 3500 6637 4480 4746 3996 2863 4101 4740 4294 * 4646 42 31 * 5574 * * * * 8659 0 0 K 43 5214 6818 4132 5065 3718 4280 3808 6612 3856 4760 5587 3566 3091 5032 3750 2572 5362 4566 * * 43 14 * 6645 * * 0 * 8625 0 1839 R 44 * 5101 5564 5225 5634 3971 * 5920 1768 4455 4997 5704 5096 5573 2052 4240 4067 6837 * 5639 44 41 5658 6987 2699 241 * 0 8655 1708 1000 G 45 6520 4140 5827 * 4926 1203 5692 5539 4561 6410 6771 4644 4093 4989 4085 4068 5101 4779 6852 5603 45 67 5282 5648 2369 311 958 1043 8675 2295 1769 F 46 4035 4171 6518 * 1674 5802 4780 4118 6513 5949 6618 * * 4962 * 5738 5525 4383 6372 1850 46 65 4509 * 2945 201 0 * 8654 2771 2376 A 47 1102 3529 * 6865 4701 1844 * * * 6514 6637 * * * * 5597 5276 4202 * * 47 16 6514 * 2585 263 * * 8659 1000 0 F 48 * 5572 * * 1066 * * 4403 * 3460 5086 * * * 6425 * 5883 4418 6489 2016 48 0 * * * * * * 8659 0 0 V 49 4135 4712 * 6743 5784 * * 2440 * 3666 6637 * * 6457 * * 5817 798 * * 49 0 * * * * * * 8659 0 0 T 50 5785 6604 4728 1910 4195 5233 * 5465 3557 4986 6582 4291 * 4246 4705 4308 2418 5145 6857 5628 50 0 * * * * * * 8659 0 0 F 51 * * * 5817 871 * * * * 3712 3964 * * * * 6072 6457 4618 6494 2203 51 14 6740 * 1000 1000 * * 8659 1000 0 D 52 2388 * 3296 2727 * 4858 5913 6757 3558 6819 * 5527 5925 4600 3713 3558 3583 4619 5721 5777 52 27 5741 * 0 * * * 8659 1712 0 D 53 5893 6072 2559 5817 6494 7057 5603 * 4056 6857 * 2680 * 6535 4745 2130 2120 * 6604 * 53 0 * * * * * * 8659 0 0 H 54 3759 5572 3767 2625 5543 * 5816 5220 4224 4704 6909 6598 3144 4607 3093 3899 5085 3217 6637 7057 54 12 6868 * 0 * * * 8659 1000 0 D 55 3758 * 2944 1607 6489 6753 5545 4839 3666 6719 6656 4545 * 3321 4645 3444 5778 * * * 55 13 6783 * 1585 585 * * 8659 1000 0 S 56 2523 5075 2510 2982 6483 3481 4117 5116 5473 5622 6431 5669 * 4436 * 2909 5789 4814 * * 56 0 * * * * * * 8659 0 0 V 57 982 4491 6457 4796 5228 6909 * 6819 6811 4086 4821 * * 5454 5926 6721 4458 2734 * 6582 57 0 * * * * * * 8659 0 0 D 58 3813 6535 3190 2864 6902 6475 5668 3974 3265 4171 6706 4331 6806 3241 3304 5089 5256 4648 5801 5639 58 0 * * * * * * 8659 0 0 K 59 2591 6277 4886 3364 * * * 4762 2513 4108 6530 2999 * 4708 3308 3997 3990 6821 * 6573 59 0 * * * * * * 8659 0 0 I 60 779 3087 * * 5116 * * 3631 * 4458 * * * * * 5553 6598 3290 6573 * 60 15 6637 * 0 * * * 8659 1000 0 V 61 4357 5110 * 5761 * 6531 * 2375 4360 1554 3615 6277 6487 * 4695 5230 * 2948 * 6587 61 205 2986 7401 216 2848 * * 8659 5007 0 I 62 3216 6582 4869 2327 * 5080 5157 7041 2647 4371 5716 4242 * 3745 3865 3272 4143 * * * 62 257 2614 * 320 2330 0 * 8689 5716 1000 Q 63 4143 6744 4988 4260 4637 4609 5479 * 3586 1650 3091 4365 * 4397 5507 3853 6497 * * 5097 63 154 3441 6746 0 * * * 8530 4600 0 K 64 5662 5528 2817 5861 5617 4946 4078 * 4347 5059 5379 1917 4554 3710 3556 3398 5601 * * * 64 18 6356 * 1000 1000 * 0 8509 1000 1000 Y 65 4957 * 4478 4760 6329 1358 4834 6458 5263 6750 4742 3186 4238 5081 4052 5619 4793 6631 6263 4964 65 33 5451 * 1811 484 0 * 8509 1690 1000 H 66 4664 5591 6451 6792 4027 4691 2674 4134 2932 5075 5962 * 5419 3688 3669 3836 3438 4477 * 4568 66 30 5587 * 625 1508 * * 8515 1872 0 T 67 5406 * 4529 2621 4095 * 5077 3317 3643 4226 5715 4335 5727 5095 5619 3781 3451 3258 5631 5473 67 46 4993 * 0 * * * 8515 2484 0 V 68 5631 * * 6342 2441 6193 * 1854 6610 1477 5452 * 6432 * * * * 3821 6722 6777 68 30 5598 * 593 1570 * * 8520 1771 0 N 69 6535 4330 2476 4298 5215 2786 4132 * 2969 3879 4555 2966 6564 5660 4222 6962 * * * 5516 69 0 * * * * * * 8514 0 0 G 70 6302 * 3288 4870 * 623 6733 * 5559 * * 3347 * * * 4564 5680 * * 6552 70 52 4829 * 718 1352 * * 8514 2330 0 H 71 5707 5664 * 5425 * 5753 4265 * 2378 * * 4218 * 3824 1334 3517 6486 5363 6183 5860 71 28 5680 * 0 * * * 8507 1782 0 N 72 5706 * * 2997 * * 5213 4593 2239 4214 4951 4237 3109 4183 2883 4631 4684 4608 * 6747 72 14 6704 * 1000 1000 * * 8507 1000 0 C 73 6295 4671 * * 6430 * * 1504 * 1751 3743 * * * * * * 2239 * * 73 14 6651 * 0 * * * 8487 1000 0 E 74 6468 * 4312 3083 5483 * 3538 6328 3115 4697 * 4626 * 5464 2032 3604 3809 3792 * 6369 74 0 * * * * * * 8482 0 0 V 75 6449 4437 * * * 6315 * 1898 * 4322 5340 * 6266 * * * * 801 * * 75 21 6132 * 1585 585 * * 8466 1000 0 R 76 5236 * 3479 4337 * 4722 6240 * 1639 * * 4048 * 3929 2226 3417 5120 * * * 76 23 5992 * 1000 1000 * * 8259 1000 0 K 77 4505 * 4998 3815 4558 * * 4165 2656 3348 5052 * 5871 * 1916 * * 3718 4611 3848 77 0 * * * * * * 8200 0 0 A 78 296 * * * * 5891 * * * * * * * * * 2929 5856 5628 * * 78 0 * * * * * * 7831 0 0 L 79 * * * * * * * 2526 * 1321 3473 * * * * * * 1573 * * 79 0 * * 0 * * * 6266 0 0 //