HHsearch 1.5 NAME d1khma_ FAM FILE d1khma_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1khma_.a3m DATE Mon Mar 8 15:57:31 2010 LENG 89 match states, 89 columns in multiple alignment FILT 121 out of 1576 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.5 EVD 0.4643 1.3921 SEQ >ss_dssp CCSSSSGGGGSCCEEEEEEEEHHHHHHHHCSSSHHHHHHHHHHCCEEEECCCCTTCSEEEEEEEECHHHHHHHHHHHHHHHTTTTTSCC >sa_dssp EEEEEEDEEECEEEECEDEBDDDDAECABCEEBECBDEAEEEBDAEBEDCECEEEDECCCACADBCEDDBEDADEDAEDADDEDEEEEE >ss_pred CCCCCCCCCCCCEEEEEEEECHHHHCHHCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCC >ss_conf 99754368889757999981936614013897179999999609899983479999862799954989999999999999998743759 >Consensus gxpxxxgxxxxxxxtxxixVpxxxxgxiIGxxGxxIxxIxxxtgaxIxixxxxxxxxxrxixIxGxxxxVxxAxxxIxxxixexxxxxx >d1khma_ GSPNSYGDLGGPIITTQVTIPKDLARSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYSGKFF >UniRef50_A6QW99(245-332:634) Predicted protein n=14 Tax=Leotiomyceta RepID=A6QW99_AJECN E=5e-10 s/c=0.74 id=21% cov=97% -RPPPQGRRPGsmDDNVETISVESSLVGLIIGRQGESLRRIESDTGTRIQfLDNADPSSSVRLCKITGSRVARGDVKAEITRIISETSA--- >UniRef50_C5LK86(93-164:503) Far upstream element-binding protein, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LK86_9ALVE E=1e-05 s/c=0.71 id=17% cov=79% -------------IERRVSLPEDKVGDVIGPRACVLDELKRRSGCRMDVVVKVPPGEMKYARIVGPPEACTIGAFLVNEVIQ------- >UniRef50_A8WP53(797-872:1250) Putative uncharacterized protein n=2 Tax=Caenorhabditis briggsae RepID=A8WP53_CAEBR E=0.0004 s/c=0.61 id=19% cov=87% ----------SETVDIKITVDPKYYKNFLARGAALIKEIQDQNGG-VVISFPKNGSDSNEVSIRGSKQCVEAARARIEDTVEDYEKQ-- >UniRef50_UPI0001925D60(1133-1202:1284) PREDICTED: similar to High density lipoprotein binding protein (vigilin) n=1 Tax=Hydra magnipapillata RepID=UPI0001925D60 E=1e-05 s/c=0.72 id=18% cov=80% -----------DQVSIEVMIDSRIHSRIIGQKGRSVRKIMEKFKVDIRFPRQE---NPNLVVISGDEESCEACKEHLQLLEEEY----- >UniRef50_B5DLY2(307-375:605) GA28855 n=4 Tax=Sophophora RepID=B5DLY2_DROPS E=2e-07 s/c=0.82 id=19% cov=78% -------------VSYEFVFPVSLIGQLYGRKRAFINQIKAKTQANVLLSKNPCTNKLRICVVEGTESEIDAALAMIRQRL-------- >UniRef50_Q4S098(524-603:613) Chromosome undetermined SCAF14784, whole genome shotgun sequence. (Fragment) n=3 Tax=Euteleostomi RepID=Q4S098_TETNG E=3e-05 s/c=0.62 id=19% cov=87% -----FGPKEEVKLETHIKMAAAAAGRVIGKGGKTVNELQNLTAAEVVVPREqtPDENDQVIVKINGHFYASQCAQRKIRDIL-------- >UniRef50_Q6R5A4(283-357:846) Bicaudal-C n=3 Tax=Danio rerio RepID=Q6R5A4_DANRE E=0.0005 s/c=0.61 id=17% cov=84% -------GVNGVMVSTQLDVTSQQHLFLLGQNGANFLTVMHQTHTQIILPDLSSPQHTPSLLIQGTADGVCLARQQLMDCL-------- >UniRef50_Q8SXI7(10-113:417) RE28792p n=5 Tax=Arthropoda RepID=Q8SXI7_DROME E=2e-07 s/c=0.55 id=20% cov=92% --PPADYKPPVTRVSDKVLIPQEQHpdinfvGLLIGPRGNTLKAMEKDTGAKIIIrgkgsvkegkvgrkdgqPLPGEDEPLHAFITAPNPEAVRKAVDKI KDVIRQ------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 4333 0 0 S 2 1664 * * * 3250 2088 * 4108 * 4599 * * * 3455 3207 4464 * * * * 2 0 * * * * * * 5444 0 0 P 3 3509 * * * * * 4784 * * * * * 513 * 2516 * * * * * 3 0 * * * * * * 6094 0 0 N 4 3316 * * 4738 4937 1971 5170 * * * * 4165 1836 4044 3720 * 4770 * * 4729 4 0 * * * * * * 6208 0 0 S 5 2525 * 2789 3058 4426 4248 * * 5191 * * * 5130 * 5258 1792 4054 4996 * * 5 29 * 5635 * * * * 6496 0 0 Y 6 3275 5073 4540 5691 2467 4199 3896 * * 5432 * * 5085 5254 4331 4031 * 2830 * 2541 6 158 3266 * 477 1828 * 0 6663 2630 1000 G 7 4073 * 5215 5057 * 961 5751 * * * * 5565 * * 5014 3103 4328 4295 * 3604 7 0 * * * * 0 * 6765 0 1000 D 8 3586 * 3643 4981 * 2605 * * 4266 5872 * 2720 2376 * 3455 3702 4078 * * * 8 0 * * * * * * 7248 0 0 L 9 3529 * 4032 4282 4678 5104 * 4823 3694 4515 * 5033 5294 3652 3563 3258 3273 3483 5847 4591 9 0 * * * * * * 7295 0 0 G 10 2979 * 4435 4031 * 1945 5746 * 5630 * * 3167 2278 4318 * 3925 4894 * * * 10 46 5910 6055 1585 585 * * 7335 1000 0 G 11 4784 * 4362 3591 * 2117 * * 3837 5427 5919 6103 2756 5251 5157 2218 6389 4880 * 6140 11 81 4610 6164 1870 461 * 0 7533 2276 1000 P 12 4784 6501 2689 3221 * 3983 * * 6494 * * 2507 2558 3685 5334 3591 4974 4240 * * 12 26 7125 6504 2322 322 0 * 7658 1000 1716 I 13 4900 * 4983 5186 4903 5939 6073 2791 3738 4381 5189 5170 4506 3255 3203 5199 3100 4002 * 4140 13 0 * * * * * 0 7703 0 1000 I 14 4570 5608 * 3272 6384 5163 * 3398 5177 4302 4428 6825 6225 4449 5280 5021 3375 1873 * 3637 14 49 6370 5547 1585 585 0 * 7755 1000 1000 T 15 4893 * 6132 2983 * 6577 5588 4971 3905 * * 5646 6532 * 5746 1884 1704 4095 * 6658 15 0 * * * * 0 * 7734 0 1676 T 16 3919 * 4039 2898 4711 5938 5550 3292 3692 3861 5272 * * 5020 4170 5139 3320 2868 * 4759 16 40 5928 6525 1341 724 * * 7762 1639 0 Q 17 5134 * 4465 2210 * * 4975 4873 2646 6691 7093 5717 * 3867 2762 4607 2858 5368 * 5093 17 12 6965 * 1000 1000 0 * 7800 1000 1000 V 18 * 7147 * * 3618 * 6321 1838 * 2444 3399 * * * * 5720 5462 1869 * 5303 18 26 6572 7147 1585 585 * * 7905 1000 0 T 19 4402 6283 4327 3591 5128 * 5831 4273 3595 2688 4858 4928 4971 4019 4556 3310 3904 3955 * 4805 19 28 6522 6878 0 * * 0 7859 1000 1000 I 20 6472 4752 * * 5055 * * 1467 * 3396 5926 * * * * * 6299 1198 * * 20 42 5541 7173 1619 568 * 0 7822 1758 1634 P 21 4320 * 3550 4138 * 6658 4743 * 6468 6948 * 6650 704 * 6615 4060 4412 * * * 21 15 6631 * 1585 585 554 1650 7822 1000 2073 K 22 2632 * 5978 3586 7229 5351 5494 4867 3239 4651 6652 3672 6441 3428 4182 2952 4714 3909 * 5357 22 10 7112 * 2585 263 0 * 7882 1000 1000 D 23 3953 5774 2770 3000 7278 5297 5313 6684 2969 6827 5875 3986 5627 5228 3862 2512 4729 5303 * 6935 23 0 * * * * * * 7881 0 0 L 24 4448 5517 4812 5028 4099 * 5015 4502 3385 2724 4813 5041 * 3484 4508 5014 4621 3516 5133 3339 24 13 6749 * 1000 1000 * * 7881 1000 0 A 25 2834 4756 * * 6318 * 2774 2543 * 4175 4075 * * * 4841 5777 * 1900 * 4140 25 18 6306 * 1999 415 * * 7881 1581 0 R 26 4327 * 6655 5002 * 1055 6895 * 3767 6142 6402 4719 4468 6445 3370 3409 5759 5958 * * 26 0 * * * * * * 7881 0 0 S 27 2844 4597 4840 6701 3265 4992 4609 * 3561 2954 7125 5159 * 5227 3066 3552 5386 5370 * 3834 27 0 * * * * * * 7881 0 0 I 28 6406 * * * 4068 * * 1790 * 1883 4380 * * * * * * 1643 * * 28 0 * * * * * * 7881 0 0 I 29 5861 6684 * * * * 6701 639 6572 3198 4652 * * * 6445 * 5454 3309 * 5216 29 11 6979 * 1000 1000 * * 7881 1000 0 G 30 6444 * 6321 * * 69 * * 6628 * * 6325 * * * * * * * * 30 0 * * * * * * 7881 0 0 K 31 3949 * 5782 4796 7102 6433 6089 5733 1942 6291 6847 5580 3173 3910 2239 4984 3757 5000 * * 31 0 * * * * * * 7881 0 0 G 32 4999 5599 6445 4571 * 1770 5264 * 2106 * * 3589 * 3053 3217 4974 * * * * 32 0 * * * * * * 7881 0 0 G 33 5130 * 6406 6325 * 170 * * 5717 * * 6684 * * 5837 * * * * 6369 33 0 * * * * * * 7881 0 0 Q 34 2304 5176 5358 3511 7123 4772 * * 3398 6375 * 3751 * 4188 3737 2419 4041 4459 * 6683 34 0 * * * * * * 7881 0 0 R 35 5441 6655 * 6319 4570 6445 5128 3756 4266 4567 5801 2110 * 5433 3250 5408 2186 3771 * 6678 35 0 * * * * * * 7881 0 0 I 36 * 6780 * * 6142 * * 970 6616 2104 5231 * * 6572 5474 * * 2610 * * 36 0 * * * * * * 7881 0 0 K 37 4107 * 5174 5178 * 6444 4944 6732 1698 6142 * 2841 6318 3377 2474 4320 5441 * 6728 * 37 0 * * * * * * 7881 0 0 Q 38 3160 * 3840 2653 6149 5022 5366 * 3036 5669 6644 4214 * 2788 3049 4039 4835 7526 * 5804 38 0 * * * * * * 7881 0 0 I 39 * * * * 5869 * * 815 * 1685 4906 * * * * * * 3831 * * 39 0 * * * * * * 7881 0 0 R 40 6850 * * 2563 7124 * * 3946 3520 * 3697 6149 * 2557 1992 3934 3770 6433 * * 40 0 * * * * * * 7881 0 0 H 41 3319 * 2981 2364 * 5208 5213 * 3885 5087 5654 4239 * 3254 3343 3503 6780 4481 * 6732 41 0 * * * * * * 7881 0 0 E 42 3814 * 3388 2367 7008 * * 5560 3103 3997 5358 4129 * 3357 3378 5017 3891 4356 * 6776 42 13 * 6851 * * * * 7881 0 0 S 43 3768 4455 6058 * 5562 * 6829 * * 5650 * 5592 * * * 1731 1195 6959 * 4340 43 20 * 6183 * * * 0 7875 0 1000 G 44 4466 * 4714 5236 * 797 5347 * 3545 5871 7075 4068 * 4591 4427 5366 * * * 6943 44 53 5441 6287 1807 486 0 * 7793 1738 1744 A 45 1361 3057 * * 6843 5086 * 5750 * * * * 6195 * * 5010 2254 2478 * * 45 75 4975 5743 988 1012 0 * 7869 2226 1000 S 46 5391 5535 3977 4857 5302 * 4000 6630 2244 6205 6505 4040 * 3695 2485 3457 4303 5250 6858 5068 46 8 * 7439 * * 0 * 7822 0 1647 I 47 * 6681 * * * * * 866 6569 3163 5234 6163 * * 5602 * 5514 2079 * * 47 0 * * * * 0 * 7829 0 1000 K 48 4727 * 4326 3867 6597 5725 3746 3857 3660 5038 4681 3473 * 3138 3680 3212 5079 3273 * * 48 60 5290 6063 0 * * * 7881 2293 0 I 49 6577 6469 * * 3405 * 5799 1547 * 2876 5268 * * * 6187 6504 6425 1672 * 6468 49 161 3725 5050 2562 268 * 0 7815 4110 1636 D 50 3768 * 3609 4016 5585 5714 4572 4938 3597 4650 6437 3938 2378 3750 5414 3123 5875 5290 * 5542 50 58 4669 * 1154 861 1919 443 7789 2740 3042 E 51 4853 * 2219 2999 4014 6188 * 6525 3929 4763 * 3959 3551 3977 3265 3303 * 5785 * * 51 57 4681 * 1510 624 * 0 7797 3097 2570 P 52 4418 * 3492 3280 6490 5300 5054 5760 3837 5040 5612 3854 2126 4793 3624 3891 4960 4919 * 7070 52 37 5292 * 736 1323 1921 442 7797 2368 2570 L 53 4572 7068 2691 3506 6315 3807 5286 5630 3837 4318 5574 3406 3514 5014 4657 4081 5117 3727 * 5586 53 128 4249 4939 1696 532 0 * 7791 3279 2158 E 54 3768 6917 2545 3622 * 3595 6913 * 4284 5763 * 4285 2033 5261 4562 3446 5719 6650 * 5630 54 49 5193 7324 2413 300 * 0 7822 2578 3191 G 55 4288 * 2968 3093 6822 2208 6333 6359 3798 5012 5844 3691 4995 5441 5810 3410 4267 4716 * * 55 41 6890 5686 2000 415 * 0 7824 1000 3354 S 56 3615 4956 4041 3500 6596 4090 5203 * 4789 4164 * 4110 3724 5437 5936 2121 3451 4197 * * 56 43 5445 7325 2389 306 881 1130 7806 2127 3800 E 57 4406 * 3166 3198 * 2975 6105 5123 3509 5747 5472 2983 3710 4981 * 3306 3873 5107 * * 57 104 4778 4908 1759 505 * 0 7835 2808 2935 D 58 * * 2467 1464 5947 7205 4779 * 4835 3936 5805 4228 6070 6171 5201 4141 4260 4296 * 6655 58 147 4036 4807 1956 430 1133 878 7806 3390 4160 R 59 4928 5096 4598 4609 6417 * 5377 6730 3255 * * 3962 5170 3766 1366 4724 4058 4197 * * 59 58 4660 * 2234 345 338 2260 7863 2620 3956 I 60 3893 5479 5558 4505 5802 * 6206 2364 3424 3582 5756 5904 5561 5699 5154 4635 3408 2517 * 5070 60 39 5225 * 1725 520 0 * 7818 2528 1559 I 61 4366 3197 * * 3872 * 6499 1815 * 3076 7144 * * * 6149 6683 6792 1642 * * 61 11 * 6979 * * * * 7881 0 0 T 62 4901 * 6612 3217 6942 * 6897 3457 3890 4437 5135 6805 * 4243 4632 3110 2401 2454 * 6745 62 25 5859 * 1044 958 * 0 7883 1754 1000 I 63 4965 6773 * * 4937 * * 1132 * 2472 5950 * * * 6786 7112 7059 2001 * * 63 32 6570 6493 1000 1000 * 0 7883 1000 1000 T 64 3596 * * 3687 5158 5063 6057 3788 3557 6876 6286 5031 * 4006 3538 2806 2641 3781 7068 5279 64 10 * 7221 * * 0 * 7816 0 1655 G 65 5856 * * 6382 * 168 * * 6571 * * 6675 5356 * 6576 5287 * * * * 65 60 5059 6575 1281 765 0 * 7881 2649 1000 T 66 5535 * 3283 4229 * 6129 5311 6011 5186 4818 5229 3213 3244 5857 5577 2310 2291 6584 * 6672 66 15 * 6553 * * 0 * 7871 0 1000 Q 67 3128 * 6735 4104 5959 6405 6834 4873 3584 5535 6316 6957 2266 3858 3790 2882 4064 3850 * 7009 67 0 * * * * 0 * 7875 0 1000 D 68 4390 * 2478 1706 6609 5921 * 5290 4737 4752 6377 5564 5817 3470 6128 3154 6220 6396 * 4431 68 24 5939 * 0 * * * 7821 1812 0 Q 69 2209 4716 3248 4306 6567 3964 6823 6195 4683 * 6987 2534 6852 2841 5048 3600 * 6340 * * 69 25 5863 * 0 * * * 7821 1672 0 I 70 4988 4131 * * * * * 2400 * 4025 5460 * * 5622 4893 5942 5818 863 * * 70 0 * * * * * * 7821 0 0 Q 71 3366 6135 3019 2521 5844 7258 4184 * 3682 4507 * 4063 6514 3130 4524 4019 4332 6114 6330 5394 71 0 * * * * * * 7821 0 0 N 72 3384 5415 4199 3798 * 6846 4966 4322 2278 4064 5484 4042 * 3987 2845 4278 4968 5716 * 6653 72 17 6414 * 2000 415 * * 7821 1000 0 A 73 251 4138 * * * 5183 * 6340 * 6677 * * * * 6593 6505 6763 5451 * * 73 0 * * * * * * 7821 0 0 Q 74 4007 6877 6229 3613 6271 * 6772 3733 2122 3406 * * * 3555 2805 5127 6596 3139 * 4959 74 0 * * * * * * 7862 0 0 Y 75 3070 6626 3650 2583 5244 5383 6639 6336 2876 4397 * 7377 * 3425 3415 3588 4902 4788 7173 6044 75 0 * * * * * * 7862 0 0 L 76 3746 6708 6712 3461 4772 6979 5211 4204 3464 2071 2675 6674 * 3976 5171 5702 6743 5426 6229 4705 76 21 6140 * 1000 1000 * * 7862 1000 0 L 77 4936 * * * 6229 * * 961 * 2115 * * * * * * * 2254 * * 77 0 * * * * * * 7862 0 0 Q 78 4929 * 4509 2852 6269 5101 5941 5749 3615 2711 5473 4352 * 2991 3413 3550 4591 5113 * 5233 78 23 * 5957 * * * * 7848 0 0 N 79 2841 * 2863 2052 * 5801 6192 6561 3331 6953 6780 3701 * 3112 4147 4780 5949 * 6501 6569 79 13 6845 * 2322 322 * 0 7781 1000 1295 S 80 4273 4898 5443 6552 4890 6050 5226 2469 3876 2694 5471 6867 * 4564 3694 6405 3676 2753 * 6224 80 0 * * * * * 0 7780 0 1295 V 81 7022 6340 * 5384 * * * 1718 6471 1775 5301 * * * * 5111 5510 1942 * 6389 81 0 * * * * 0 * 7783 0 1295 K 82 3707 * 5943 2235 * 3672 5324 * 2617 4102 * 4116 * 3178 2985 4400 5847 * * 6537 82 0 * * * * * * 7650 0 0 Q 83 4858 * 3182 1328 * 6441 * * 2781 5746 5515 6056 6479 2545 4359 * * * * 6237 83 0 * * * * * * 7410 0 0 Y 84 3404 * 5693 3110 3542 5967 3287 4681 3946 * * 3295 * 4085 4281 5454 5920 5885 4941 2632 84 0 * * * * * * 7169 0 0 S 85 3825 * 3198 1913 * 4636 * * * 5037 * * 3504 3314 * 2387 4010 4565 * * 85 0 * * * * * * 6686 0 0 G 86 1863 * 4946 3344 * 1876 * * 4814 * * * * 4345 4942 2971 3704 * * * 86 0 * * * * * * 6448 0 0 K 87 5481 * 5022 2232 * 4452 * * 1234 * * 4930 * 2897 3829 * 5275 * * * 87 0 * * * * * * 6221 0 0 F 88 4214 * * * 2524 * * 4687 3083 * * 2940 * 4113 2702 4360 2624 * * 3994 88 0 * * * * * * 5439 0 0 F 89 * * * * 953 * * * * 2356 * * * * * * * * * 1796 89 0 * * 0 * * * 4536 0 0 //