HHsearch 1.5 NAME d1k1xa1 FAM FILE d1k1xa1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1k1xa1.a3m DATE Tue Mar 9 02:53:02 2010 LENG 74 match states, 74 columns in multiple alignment FILT 24 out of 28 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.0 EVD 0.4315 0.7796 SEQ >ss_dssp CCGGGHHHHCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTCGGGGCCSSSCGGGCHHHHHHHHHHHHHHHTTC >sa_dssp EEDEECBEEBDEADEACDCBDEABEEADEDEEADECADDADEDDABCCDEECBBEDEEDDEDBCDBAEDACEDE >ss_pred CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >ss_conf 91267751097677999999999999962189999999720887347777621467689999999999986409 >Consensus GxwrNFlxKYpEsnxmhkRMlxvsxxxxxxpxaxxxlxxaQcNdxyWHGxFGGlYlpxLRxxxyxxlixaexxl >d1k1xa1 GIWKNFFFKYPESNFMHKRMLMVSKAVRDNPEARKYILKAQCNDAYWHGVFGGIYLPHLRRTVWENIIKAQRYL >UniRef50_A6BZU9(314-400:731) Alpha-amylase n=3 Tax=Planctomycetaceae RepID=A6BZU9_9PLAN E=8e-14 s/c=0.90 id=52% cov=101% GFWRNFRVKYAELNEMYTRMLHVSNRLQsleetgvdaeDLPalhEARTELYRAQCNCPYWHGAFGGLYLPHLRNAIYKHLISADTLL >UniRef50_B5YA08(304-380:609) Alpha-amylase 1 (1,4-alpha-D-glucan glucanohydrolase) n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5YA08_COPPD E=3e-10 s/c=0.86 id=41% cov=96% GFWRRFLKSHPESRWMYGRVVSLSRYLNNlaprHPRKNKALMelyRAEANDVFWHGVFGGLYLSHLRRNLYHRLIRA---- >UniRef50_C1SHR6(311-386:679) Alpha-amylase/alpha-mannosidase n=2 Tax=Bacteria RepID=C1SHR6_9BACT E=6e-27 s/c=1.59 id=51% cov=101% GIWKNFLVKYPESNRIHKRTVSLSKKANESGDlqLLDALYKAQCNDVLWHGIFGGLYLPNLRNNAYRFIIEAEKRL >UniRef50_A3EQP0(317-392:697) 4-alpha-glucanotransferase n=2 Tax=Leptospirillum sp. Group II RepID=A3EQP0_9BACT E=4e-25 s/c=1.51 id=49% cov=101% GIFENFLVKYPDVARMYGRMLQVSDMVKsgESPEALEALMRAQGNDVYWHGLFGGIYLSNLRHEAYSNLLKAEDAL >UniRef50_A3DPC3(280-356:643) Glycoside hydrolase, family 57 n=1 Tax=Staphylothermus marinus F1 RepID=A3DPC3_STAMF E=4e-24 s/c=1.45 id=55% cov=100% GFFRNFLIKYRESNNMHKKMLWVRRKLKNAPevaeEAWRYYHLAQCNDAYWHGLFGGIYLSHLRQAIYEYYLKAERL- >UniRef50_C0R0I6(313-390:706) Alpha-amylase 1 (1,4-alpha-D-glucan glucanohydrolase) n=2 Tax=Brachyspira RepID=C0R0I6_BRAHW E=4e-23 s/c=1.38 id=52% cov=96% GFWRNYFSKYSESNRMNKRMIFTSNMIgeitesnyKEKEEALSYLLKGQCNCPYWHGTFGGLYLNNLRHATYANLIKA---- >UniRef50_B3DYE7(314-392:680) Alpha-amylase/alpha-mannosidase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DYE7_METI4 E=3e-19 s/c=1.22 id=34% cov=99% GNWLSFLSKYPEANYIHKRMLQVSEKIRSLPgnlreDIYDSLLASQGHTVYWHAYKDGLFGNYIRDNAFYHILSTEK-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 2910 0 0 I 2 * * * * 1183 * * 1303 * * * 3251 * * * * * * * 4347 2 0 * * * * * * 2923 0 0 W 3 * * * * 2208 * * * * * * * * * * * * * 352 * 3 0 * * * * * * 2985 0 0 K 4 * * * 3496 * * 3962 * 2578 3258 * * 4381 * 924 * * * * * 4 0 * * * * * * 2985 0 0 N 5 * * * * * * * * * * * 312 * * 3474 3258 * * * * 5 0 * * * * * * 2985 0 0 F 6 * * * * 70 * * * * * * * * * * * * * * 4406 6 0 * * * * * * 2985 0 0 F 7 * * * * 1970 * * * 4464 697 4466 * * * 4739 * * * * * 7 0 * * * * * * 2985 0 0 F 8 4488 * * * 5056 * * 4765 3474 * 4934 * * * 4381 2721 3301 1105 * * 8 0 * * * * * * 2985 0 0 K 9 * * * * * * * * 311 * * * * * 3269 3474 * * * * 9 0 * * * * * * 2985 0 0 Y 10 * * * * * * 3474 * * * * * * * * * * * * 136 10 0 * * * * * * 2985 0 0 P 11 4739 * 4488 3810 * * * * 4536 * * * 730 3866 3560 4406 * * * * 11 0 * * * * * * 2985 0 0 E 12 * * 3496 134 * * * * * * * * * * * * * * * * 12 0 * * * * * * 2985 0 0 S 13 2470 * * * * * * * * 4739 * * * * * 737 3422 3496 * * 13 0 * * * * * * 2985 0 0 N 14 4792 * 4536 * * * 4250 * * * * 362 * * 3474 * * * * * 14 0 * * * * * * 2985 0 0 F 15 * * * 3595 5056 * 4488 * * * * 2967 * 3583 1724 * * * 2685 2530 15 0 * * * * * * 2985 0 0 M 16 * * * * * * * 2069 * 3014 649 * * * * * * * * * 16 0 * * * * * * 2985 0 0 H 17 * * * * * * 628 * * * * 4406 * 4488 * * * * * 1936 17 0 * * * * * * 2985 0 0 K 18 4464 * * * * 2988 4250 * 437 * * * * * * * 4739 * * * 18 0 * * * * * * 2985 0 0 R 19 * * * * * * * * 2248 * * * * * 341 * * * * * 19 0 * * * * * * 2985 0 0 M 20 * * * * 4925 * * * * * 296 * * * * * 4995 3044 * * 20 0 * * * * * * 2985 0 0 L 21 * * * * * * * 3562 * 482 4464 * * 4928 * * * 3043 * * 21 0 * * * * * * 2985 0 0 M 22 * * 3352 2724 4406 3931 3725 * * 4250 3729 * * 2830 * 3043 * * 3646 3434 22 0 * * * * * * 2985 0 0 V 23 4464 * * * * * * 4466 * 1812 * * * * * * 3326 930 * * 23 54 4775 * 1000 1000 * * 2985 1000 0 S 24 * * * * * 4250 * * 3651 * * * * * 3024 514 * * 4488 * 24 46 4999 * 1585 585 * * 2985 1000 0 K 25 4928 * 3751 3258 * 4381 4250 4925 1748 * * 3563 * 4934 2662 4775 4466 * * * 25 0 * * * * * * 2985 0 0 A 26 5056 * * * 4250 * 4737 * 1278 * 3586 * 4999 * 2369 3848 * * * 3474 26 122 3629 * 1585 585 * * 2985 1451 0 V 27 3706 * * * * * * 2076 4775 1769 * * * 3810 * 4963 * 2680 * 3367 27 140 3434 * 2595 261 * * 2985 1414 0 R 28 3550 * * 4536 * * 4934 * 1891 * * 3043 * 3608 1954 3832 4737 * * * 28 179 3100 * 2297 328 * * 2985 1666 0 D 29 4381 * 1661 2580 * * * * 3981 * * 2648 * * 3743 2547 * * * * 29 249 3002 4887 2585 263 * * 2985 1692 0 N 30 3425 * * * * 4431 4384 * 2605 2107 * 2795 4894 * * 2602 * 4683 * 4851 30 153 3310 * 2585 263 * 0 2984 1551 1000 P 31 3679 * * 4380 * 4917 * * 3133 * * * 835 * 2959 4740 * * * * 31 633 1494 * 2219 349 * 0 2984 2332 1000 E 32 * * 2369 1310 * * 4431 * 2294 * * * * 3890 4384 4740 * * * * 32 101 3884 * 1347 721 * 0 2984 1197 1000 A 33 986 * * * 3894 * * 3237 3551 3701 4886 * * * * 4923 4441 * * 4418 33 81 4198 * 0 * * 0 2984 1000 1000 R 34 * * * 4683 * * * 4441 4740 1328 4465 4384 * * 2652 4923 * * 3507 3237 34 49 4894 * 0 * 0 * 2984 1000 1000 K 35 * * 1640 2109 * * * * 2819 4250 4535 * * 4464 4765 4406 4739 4536 * * 35 47 4963 * 1000 1000 * * 2985 1000 0 Y 36 2121 * * 2005 * * * * 4466 * * 3962 4250 * * 3258 * * * 1974 36 0 * * * * * * 2985 0 0 I 37 * * * * * * * 2797 * 664 * * * * * * * 4488 * 2471 37 0 * * * * * * 2985 0 0 L 38 * * * * 4488 * 4765 * * 1126 3592 * * * * * * * 3583 1765 38 69 4417 * 1585 585 * * 2985 1000 0 K 39 2809 * * 3681 * * * * 1630 3646 * * * 4488 1592 * * * * * 39 0 * * * * * * 2985 0 0 A 40 774 * * * * 2513 * * * 3810 * * * * * 2567 * * * * 40 0 * * * * * * 2985 0 0 Q 41 * * * 3474 * * * * * * * * * 136 * * * * * * 41 0 * * * * * * 2985 0 0 C 42 2321 901 * * * 2372 * * * * * * * * * * 3810 * * * 42 0 * * * * * * 2985 0 0 N 43 * * * * * * 3258 * * * * 159 * * * * * * * * 43 0 * * * * * * 2985 0 0 D 44 * 2229 552 * * * * * * * * * * * * * 3258 * * * 44 0 * * * * * * 2985 0 0 A 45 1416 * * * * * * * * * * * 2513 * * * * 1152 * * 45 0 * * * * * * 2985 0 0 Y 46 * * * * 2633 * * * * 3388 * * * * * * * * * 428 46 0 * * * * * * 2985 0 0 W 47 * * * * * * * * * * * * * * * * * * 0 * 47 0 * * * * * * 2985 0 0 H 48 * * * * * * 0 * * * * * * * * * * * * * 48 0 * * * * * * 2985 0 0 G 49 3258 * * * * 159 * * * * * * * * * * * * * * 49 0 * * * * * * 2985 0 0 V 50 3595 * * * * * * 1837 * 1826 * * * * * * 4406 2297 * 3258 50 0 * * * * * * 2985 0 0 F 51 * * * * 159 * * * 3258 * * * * * * * * * * * 51 0 * * * * * * 2985 0 0 G 52 * * 3258 * * 159 * * * * * * * * * * * * * * 52 0 * * * * * * 2985 0 0 G 53 * * * * * 0 * * * * * * * * * * * * * * 53 0 * * * * * * 2985 0 0 I 54 * * * * * * * 2205 * 629 * * * * * * 4466 3457 * * 54 0 * * * * * * 2985 0 0 Y 55 * * * * 3258 * * * * * * * * * * * * * * 159 55 0 * * * * * * 2985 0 0 L 56 * * * * 3866 3258 * 4381 * 361 * * * * * * * * * * 56 0 * * * * * * 2985 0 0 P 57 4536 * * * * * * * * * * 2397 858 * * 2215 * * * * 57 0 * * * * * * 2985 0 0 H 58 * * * * 3537 * 1116 * * * * 1523 * * * * * * * 3258 58 0 * * * * * * 2985 0 0 L 59 * * * * * * * 3258 * 159 * * * * * * * * * * 59 0 * * * * * * 2985 0 0 R 60 * * * * * * * * * * * * * * 0 * * * * * 60 0 * * * * * * 2985 0 0 R 61 * * 2508 * * * 2465 * * * * 2488 * 2967 1976 4712 4488 * * * 61 0 * * * * * * 2985 0 0 T 62 1300 * * 2669 * * * * * * * 1469 4466 * * * 5056 * * * 62 0 * * * * * * 2985 0 0 V 63 1605 * * * * * * 1986 * 2964 * * * * * * 3672 2236 * * 63 0 * * * * * * 2985 0 0 W 64 * * * * 2040 * * * * * * * * * * * * * 2927 677 64 0 * * * * * * 2985 0 0 E 65 3562 * * 2304 * * 3027 * 3864 * * 2768 * * 2731 3751 4466 * * 3258 65 0 * * * * * * 2985 0 0 N 66 3681 * * * 3350 * 2092 * 4536 * * 2219 * 4464 2964 4250 * * * 3244 66 0 * * * * * * 2985 0 0 I 67 * * * * * * * 1592 * 742 * * * * * * * 4887 * 4765 67 0 * * * * * * 2985 0 0 I 68 4887 4737 * * * * * 719 * 1873 * * * * * * * 4381 * * 68 0 * * * * * * 2985 0 0 K 69 3104 * * 2319 * * * * 1310 * * * * * 2858 2816 * * * * 69 0 * * * * * * 2985 0 0 A 70 695 3100 * * * * * * * 3931 * * * * * 4250 3258 4536 * * 70 0 * * * * * * 2985 0 0 Q 71 * * 2050 481 * * * * * * * * * 4572 * * * * * * 71 0 * * * * * * 2892 0 0 R 72 3461 * 4319 * * * * * 1813 * * 2669 * * 1934 * 3346 4130 * * 72 0 * * * * * * 2857 0 0 Y 73 2406 * * 2748 * * * * * 1338 * * * * 4319 4387 * * 4094 3179 73 0 * * * * * * 2675 0 0 L 74 * * * * * * * 3878 * 102 * * * * * * * * * * 74 0 * * 0 * * * 2454 0 0 //