HHsearch 1.5 NAME d1jmxa5 FAM FILE d1jmxa5 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1jmxa5.a3m DATE Mon Mar 8 16:01:40 2010 LENG 119 match states, 119 columns in multiple alignment FILT 12 out of 16 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.3 EVD 0.3791 -2.6615 SEQ >ss_dssp CCHHHHHHHHHCCCGGGSCEEEEEEEEETTTEEEEEEEEEEECSTTEEEEEEEEEETTSCEEEEEEEEEEETTTEEEEEEEETTEEEEEEEEEETTEEEE EEEETTEEEEEEEEEEEEC >sa_dssp EDEEDDECDEEDDEBEDBCCDAEBDBDCEEDCDADCDACADEDEEDCBEBDADCCBDEEDEADBECDBDBEDBCCADBCADCEECCBDADACBDEDCADD DACCCDDEEDBAEBDAEDE >ss_pred CCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCEEEEEEEECCEEEEEEEECCCCCEEE EEEEECCCCCCEEEEEEEC >ss_conf 9744456531355444667407998304776307999998147887616899998147861222578999747226688730873546677137783233 5876045413605897309 >Consensus xtxaWxxWqxaxxxxaxLxGxWxvsgxxPgkGxxxGxmxxxxxxxdxYxvxixxxyadGsxxtxxGxaiVYtgyEWRgsxxxgxxxxRqvxAxdgxxlxG RxFxxxxdxxGgxxxAxra >d1jmxa5 ESAAWAEWQKARPKADALPGQWAFSGHMLAKGDVRGVMSVTPDQGDTFKVEVKGAYADGTPFNGSGSAILYNGYEWRGNVKVGDANLRQVFAALDGEMKG RMFEAEHDERGLDFTAVKE >UniRef50_C4KB05(191-309:530) Putative uncharacterized protein n=1 Tax=Thauera sp. MZ1T RepID=C4KB05_THASP E=1e-12 s/c=0.62 id=40% cov=99% DARAWKAWQAA-PRT-ALDGSWRIAGFLPGKGAFEGRMRASAAGEDRYELAIEGRYADGALLSGRGVATVYTGYEWRGSVDIDGVALRQVMAAdARGErM HGRQHFADSRRMGGALSALRE >UniRef50_A8ES16(206-305:535) Quinohemoprotein amine dehydrogenase, 60 kDa subunit n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ES16_ARCB4 E=1e-14 s/c=0.81 id=28% cov=83% -----------------LPKKWIMSGHTPIIGDFTANLTLMKSADESYGMLIDYKYANGKEYKTTGVAIVYGKTELRASFEVDGVKYRQILHIDpkTNTL EGRMFEVLHSENGSTLV---- >UniRef50_A0NPA8(88-397:521) Quinohemoprotein amine dehydrogenase, alpha subunit n=2 Tax=Rhodobacterales RepID=A0NPA8_9RHOB E=1e-102 s/c=0.43 id=32% cov=98% ETEAWNKWLEAQKPQAT--GRWVFATSLPEKGDAYGALEVTGDSQP-YSVSGTLMTVDGEELTLEGKLNVYTGYEWRANLDIGGEKYRQILAisEDGSSL SGRQFVHAEDSLGGSFKAARA >UniRef50_Q5P5Q6(95-417:538) Quinohemoprotein amine dehydrogenase, 60 kDa subunit n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5Q6_AZOSE E=1e-113 s/c=0.46 id=34% cov=99% DSASWTQWKAQKPADAS--GTWRLVGHRPGMGAYEGTATIARTGDDRYSVDMVMRYENGTSDTAKGTAIVYTGHEWRASVKQGDREVNHVMSlgAGGNEL SGRWFEANNDSIGGTMRAVRA >UniRef50_Q2G3W0(119-467:594) Quinohemoprotein amine dehydrogenase, 60 kDa subunit n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G3W0_NOVAD E=8e-92 s/c=0.44 id=29% cov=100% ATPEWSAWQ-ARVQSSKLGGRWLVSASLPGKGKYVGEMVLAPaASGDDYSTTISLKsLADGSTLTRKGKGLVYTGYAWRGTSASGPEGARpdapedhetr etMWFSPDRKSAEGRWFWGDYKEFGFDVKLTRA >UniRef50_Q2BHT3(86-406:527) Quinohemoprotein amine dehydrogenase, 60 kDa subunit n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHT3_9GAMM E=1e-113 s/c=0.44 id=42% cov=99% QTQAWSDWKA--KPKAALNGQWAVSGFVPDKGEFTAVMSVMPNQKDNYITLINGHYADGSKLTGSGSATVFTGYEWRGAIVIDGRKMRQVFAAseDGKQM AGRMYLKNDEVMGGRVLAEKA >UniRef50_Q5P0U9(107-429:548) Quinohemoprotein amine dehydrogenase 60 kDa subunit n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P0U9_AZOSE E=1e-113 s/c=0.47 id=33% cov=99% DTPVWREWRSAQHRPAT--GSWVVAGERPGWGAYTGTMTARAAGPDRYEVSYELRFGVGNTVRGQGDAIVYTGYEWRGSAKLGNEDTRSIFAlsPDGSRM SGRWFLKGADEIGARFEAVRA >UniRef50_Q3KBY9(88-395:516) Quinohemoprotein amine dehydrogenase 60 kDa subunit n=3 Tax=Proteobacteria RepID=Q3KBY9_PSEPF E=1e-106 s/c=0.37 id=28% cov=93% G-------QAPKAANAKLSERWVVTGHQPGSGDYSGTLSLK-SGEEGYDVSMTLENKAGSA-TYQGRGVLLGEGEWRATLSDGKQEIRQVFALnADGSLT GRWFEKSNEVIGGRFIASPV >UniRef50_D0D5G8(90-397:518) Quinohemoprotein amine dehydrogenase, 60 kDa subunit n=1 Tax=Citreicella sp. SE45 RepID=D0D5G8_9RHOB E=1e-100 s/c=0.37 id=28% cov=93% G-------DMPEAFSGDLSGRYVVAGRQPGRGAYSGSMEL-AASDAGYDVTLELSFADGSE-TYTGTGLVYGAGEWRATLSAGDVTIRQVMALEGAELSG RWFVAGEDATGGDIVARAE # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * E 1 3187 * 1429 2100 * 2411 * * * * * * * 3356 * * * * * * 1 300 * 2411 * * * * 3169 0 0 S 2 3202 * * * * * * * * * * 3346 * * * 2048 859 * * * 2 0 * * * * * 0 2887 0 1428 A 3 2048 * * 2458 * * * * * * * * 1517 3082 3202 * * * * * 3 0 * * * * * 0 2887 0 1428 A 4 702 * * 2874 * * * * * * * * * * * 2900 * 3124 * * 4 0 * * * * * 0 2887 0 1428 W 5 * * * * * * * * * * * * * * * * * * 0 * 5 0 * * * * * 0 2887 0 1428 A 6 3213 * * * * * * * 3202 * * 2458 * * 3124 1974 2106 * * * 6 0 * * * * * 0 2887 0 1428 E 7 1542 * 3082 2167 * * * * 2458 * * * * 2900 * * * * * * 7 0 * * * * * 0 2887 0 1428 W 8 * * * * * * * * * * * * * * * * * * 0 * 8 0 * * * * 0 * 2887 0 1428 Q 9 * * 3448 * * * * * 2295 2788 * * * 1094 3451 * * * * * 9 168 * 3187 * * * * 3169 0 0 K 10 1193 * * 2600 * * * * 3357 * 3275 * * 3431 * 3263 * * * * 10 170 * 3169 * * 0 * 3024 0 1000 A 11 553 * * * * * * * * * * * 2299 3121 * * * * * * 11 288 3702 3261 0 * * 0 3059 1000 1000 R 12 * * * 3230 * * * * 1605 * * * * 2277 1481 * * * * * 12 0 * * * * 0 * 2948 0 1465 P 13 2411 * * * * * 3451 * 2541 * * * 1188 * * * * 3187 * * 13 0 * * * * * * 3169 0 0 K 14 2304 * * * 3448 * * * 3499 * * * 2541 1925 2456 * * * * * 14 0 * * * * * * 3169 0 0 A 15 2047 * 3237 * * * * * 3356 * * 3375 3451 3754 * 2311 3461 * * * 15 137 * 3461 * * * * 3169 0 0 D 16 720 * 3362 * * 3336 * * * * * * * * * 3062 3706 * * * 16 115 * 3706 * * 0 * 3088 0 1000 A 17 1397 * 3379 * * * * * 2205 * * * * * * 3190 2338 * * * 17 530 * 1702 * * * 0 3154 0 1000 L 18 * * * * * * * * * 0 * * * * * * * * * * 18 0 * * * * * 0 3000 0 2001 P 19 3281 * 3036 * * 2803 * * * * * 3114 1915 * * 1993 * * * * 19 0 * * * * 0 * 3000 0 2001 G 20 * * * 3553 * 282 * * 3437 * * * * * * * * * * * 20 0 * * * * * * 3330 0 0 Q 21 * * 3763 * * * * * 3437 * * * * 2573 1311 2581 3385 * * * 21 0 * * * * * * 3330 0 0 W 22 * * * * * * * * * * * * * * * * * * 126 3577 22 0 * * * * * * 3330 0 0 A 23 2573 * * * * * * 3437 * 3295 * * * * 2490 3763 * 1373 * * 23 0 * * * * * * 3330 0 0 F 24 * * * * 1801 * * 3603 * 3385 3437 * * * * * * 1175 * * 24 0 * * * * * * 3330 0 0 S 25 1384 * * * * * * * * * * * * * * 1198 3553 3385 * * 25 0 * * * * * * 3330 0 0 G 26 3295 * * * * 385 * * * * * * * * * * 2919 * * * 26 0 * * * * * * 3330 0 0 H 27 * * * 3559 2562 * 1225 * * * * * * * 3577 2095 * * * * 27 0 * * * * * * 3330 0 0 M 28 * * * * * * * * * 1358 3626 * * 2565 2470 * 3437 3521 * * 28 0 * * * * * * 3330 0 0 L 29 * * * * * * * * * 3626 * * 122 * * * * * * * 29 0 * * * * * * 3330 0 0 A 30 3626 * 3521 2919 * 719 * 3437 * * * * * * * * * * * * 30 0 * * * * * * 3330 0 0 K 31 * * * * * * * 3437 841 * 3385 * * * 3577 3553 * * 3559 * 31 0 * * * * * * 3330 0 0 G 32 * * * * * 0 * * * * * * * * * * * * * * 32 0 * * * * * * 3330 0 0 D 33 1529 * 1356 2637 * * * * 3295 * * * * * * * * * * * 33 0 * * * * * * 3330 0 0 V 34 2919 * * * 1934 * * * * 3763 * * * * * * * 3626 * 1147 34 0 * * * * * * 3330 0 0 R 35 3763 * * 2490 * * * * * * * * * * 3626 2565 1920 3295 * 2919 35 0 * * * * * * 3330 0 0 G 36 2479 * * * * 285 * * * * * * * * * * * * * * 36 0 * * * * * * 3330 0 0 V 37 2919 * * 3295 * * * * * * * 3437 * * 3603 3577 1912 2048 * * 37 0 * * * * * * 3330 0 0 M 38 3385 * * * * * * * * 1691 750 * * * * * * * * * 38 0 * * * * * * 3330 0 0 S 39 * * * 2211 * * * * * * * * * * 3603 1613 1874 3295 * * 39 0 * * * * * * 3330 0 0 V 40 2581 * * * * * * 3385 * 1461 * * * * * * * 1419 * * 40 126 * 3577 * * * * 3330 0 0 T 41 2223 * * * * * * * 3266 * 2392 * * * 3428 2583 2111 * * * 41 275 * 2527 * * 0 * 3240 0 1000 P 42 1393 * * * * 3318 * * 3254 * * * 1710 * 3203 * * * * * 42 175 3128 * 0 * 1037 963 3220 1000 1541 D 43 1443 * 2486 * * 3639 * * * * * 3478 * * * 2430 3348 * * * 43 0 * * * * * 0 3322 0 1000 Q 44 3380 * * 3639 * 1469 * * * * * * * 2511 * 1801 * * * * 44 0 * * * * 0 * 3322 0 1000 G 45 * * 1879 2578 * 1642 * * 3521 * * * 3559 3871 * * * * * * 45 0 * * * * * * 3330 0 0 D 46 3577 * 577 2494 * * * * * * * * 3871 * * * * * * * 46 102 * 3871 * * * * 3330 0 0 T 47 * * 3235 * * 2486 * * * * * 3445 * 3692 1857 2435 3555 * * * 47 0 * * * * 0 * 3308 0 1000 F 48 * * * * 2693 * * * * * * * * 3968 * * * * * 356 48 0 * * * * * * 3330 0 0 K 49 * * 2565 2581 * 3437 * 3521 2693 * * * 3968 * * 1911 * * * * 49 0 * * * * * * 3330 0 0 V 50 * * * * * * * * * 2681 3437 * * * * * 2404 1003 * 3968 50 0 * * * * * * 3330 0 0 E 51 3603 * 3385 3626 * * * * * 2479 * * * * * 1411 2429 * * * 51 0 * * * * * * 3330 0 0 V 52 * * * * * 3871 * 1460 * 3577 2466 * * * * * * 2194 * 3559 52 0 * * * * * * 3330 0 0 K 53 * * 3437 1995 * * * * 2693 * * 3521 * * * 2593 2703 3385 * * 53 0 * * * * * * 3330 0 0 G 54 * * * * * 1366 * * * 1238 3385 * * * * * * * * 3437 54 0 * * * * * * 3330 0 0 A 55 3626 * * 3553 * * 3521 * 2365 * 3871 * * 3763 1928 3577 3968 * * * 55 155 3295 * 0 * * * 3330 1000 0 Y 56 * * * * 2568 * * * * 2593 * 3553 * * * * 3871 * * 966 56 95 3968 * 1000 1000 * * 3330 1000 0 A 57 732 * * 3385 * 3559 * * 3553 * * * * * * * * 2919 * * 57 0 * * * * * * 3330 0 0 D 58 3553 * 640 * * * * * * * * 2411 * * * * * 3559 * * 58 0 * * * * * * 3330 0 0 G 59 * * * * * 0 * * * * * * * * * * * * * * 59 0 * * * * * * 3330 0 0 T 60 3603 * * 2919 * * * * 3437 * * 3559 * * * 1212 2500 * * * 60 0 * * * * * * 3330 0 0 P 61 3553 * * 1697 * * * * 3521 3603 * * 2693 * * 3385 2421 * * * 61 267 * 2565 * * * * 3330 0 0 F 62 * * 3086 * 2453 * * * * 1048 * * * * * * * 3265 * 3157 62 0 * * * * 0 * 3076 0 1428 N 63 * * * * * * * * 3437 * * 2693 * * 3559 3603 771 * * * 63 0 * * * * * * 3330 0 0 G 64 3385 * * * * 1290 * * * 2919 * * * * 3295 * 3437 * * 2565 64 0 * * * * * * 3330 0 0 S 65 * * * 2280 * * * * 2340 * * * * 2556 3603 2573 2505 * * * 65 0 * * * * * * 3330 0 0 G 66 * * * * * 0 * * * * * * * * * * * * * * 66 0 * * * * * * 3330 0 0 S 67 * * 3559 * * * * * 2095 * * * * * 3553 2048 2478 2518 * * 67 0 * * * * * * 3330 0 0 A 68 744 * * * * 1884 * * * 2919 * * * * * * * * * * 68 0 * * * * * * 3330 0 0 I 69 * * * * * * * 1226 * 2429 * 2919 * * * * 2562 3553 * * 69 0 * * * * * * 3330 0 0 L 70 * * * * * * * * * 2059 * * * * * * * 396 * * 70 0 * * * * * * 3330 0 0 Y 71 * * * * 3521 * * * * 3553 * * * * * * * * * 273 71 0 * * * * * * 3330 0 0 N 72 * * * * * 1936 * * * * * 2693 * * * * 776 * * * 72 0 * * * * * * 3330 0 0 G 73 3577 * * 3553 * 437 * * 3437 * * * * * * * * * * * 73 0 * * * * * * 3330 0 0 Y 74 * * * * * 2565 3385 * * * * * * * * * 3437 * * 637 74 0 * * * * * * 3330 0 0 E 75 3295 * * 155 * * * * * * * * * * * * * * * * 75 0 * * * * * * 3330 0 0 W 76 * * * * * * * * * 3437 * * * * * * * * 140 * 76 0 * * * * * * 3330 0 0 R 77 * * * * * * * * * * * * * * 0 * * * * * 77 0 * * * * * * 3330 0 0 G 78 1031 * * * * 969 * * * * * * * * * * * * * * 78 0 * * * * * * 3330 0 0 N 79 3521 * * * * * * * * * * 1801 * * * 1494 1884 * * * 79 0 * * * * * * 3330 0 0 V 80 3559 * * * 3437 * * 3521 * 1731 * * * * * 3295 * 1588 * * 80 0 * * * * * * 3330 0 0 K 81 3295 * 2221 3437 * * * * 1935 * * * * * * 2565 3763 3521 * * 81 0 * * * * * * 3330 0 0 V 82 3577 * 3553 * * * * 1729 * 3559 * * * 3385 * 3295 * 2017 * * 82 0 * * * * * * 3330 0 0 G 83 * * 1576 * * 589 * * * * * * * * * * * * * * 83 0 * * * * * * 3330 0 0 D 84 * * 1941 * * 1097 * * 3553 * * 3559 3295 * * * * * * * 84 0 * * * * * * 3330 0 0 A 85 3626 * * 1649 * * * * * * * * * 3553 2452 * * 1590 * * 85 0 * * * * * * 3330 0 0 N 86 3603 * 3559 2466 * 3295 * * 1682 * * 3626 * * * * 3577 3763 * * 86 0 * * * * * * 3330 0 0 L 87 3295 * * * * * * 2565 * 2615 2637 * * * * * 3559 3385 * 2155 87 0 * * * * * * 3330 0 0 R 88 * * * * * * * * * * * 3385 * * 145 * * * * * 88 155 3295 * 3585 126 * * 3330 1000 0 Q 89 * * * * * * 3385 * * * 3295 * * 479 * 3559 * * * * 89 0 * * * * * * 3330 0 0 V 90 * * * * * * * 1693 * * * * * * * * * 764 3295 * 90 0 * * * * * * 3330 0 0 F 91 * * * * 1184 * * * * 1746 1934 * * * * * * * * * 91 0 * * * * * * 3330 0 0 A 92 494 * * * * * 3437 * * * * * * * * 2340 * * * * 92 413 2007 * 1000 1000 * * 3330 1902 0 A 93 1252 * * 3871 * * * 2678 * 2565 * * 2421 * * * * * * * 93 553 1651 * 553 1651 * * 3330 2247 0 L 94 2578 * 1005 3577 * 3385 * * * 3626 * * * 3763 * * * * * * 94 140 3437 * 1000 1000 * * 3330 1000 0 D 95 * * 2589 * * 843 * * * * * * * * 2441 * 3437 * * * 95 0 * * * * * * 3330 0 0 G 96 3577 * * * * 2009 * * 2404 * * 1934 * * * 2204 * * * * 96 0 * * * * * * 3330 0 0 E 97 3763 * * 1545 * * * * * * * * * 3521 3559 1647 3437 * * * 97 124 3603 * 0 * * * 3330 1000 0 M 98 3295 * * * * * * * * 829 1577 * * * * * * * * * 98 0 * * * * * * 3330 0 0 K 99 3521 * * 2365 * * 3603 * 3626 * * * * 3763 * 1334 3553 * * * 99 0 * * * * * * 3330 0 0 G 100 * * * * * 0 * * * * * * * * * * * * * * 100 0 * * * * * * 3330 0 0 R 101 * * * * * * * * * * * * * * 0 * * * * * 101 0 * * * * * * 3330 0 0 M 102 * * * * * * * * * * 1582 * * 2221 * * * * 1147 * 102 0 * * * * * * 3330 0 0 F 103 * * * * 268 * 3603 * * * * * * * * * * * * 3521 103 0 * * * * * * 3330 0 0 E 104 * * * 1225 3603 * * * * 2540 * * * * * * * 2211 3295 * 104 0 * * * * * * 3330 0 0 A 105 1264 * * * * 3295 2919 * 1959 * * * * * * * * 3437 * * 105 0 * * * * * * 3330 0 0 E 106 2919 * 2441 2693 * 2568 * * * 3437 * 2452 * * * 3553 * * * * 106 0 * * * * * * 3330 0 0 H 107 3559 * 3521 2211 * * 2017 * * * * 2466 * * * 3603 * * * 3295 107 0 * * * * * * 3330 0 0 D 108 * * 859 2537 * * * * 3295 * * * * * 3603 3437 * * * * 108 0 * * * * * * 3330 0 0 E 109 3577 * * 1205 * * * * * * * * * * 3603 2133 * 2537 * * 109 0 * * * * * * 3330 0 0 R 110 * * * * 3295 * * 1912 * 2919 2562 3437 * * 2693 * 3577 * * * 110 0 * * * * * * 3330 0 0 G 111 * * * * * 0 * * * * * * * * * * * * * * 111 0 * * * * * * 3330 0 0 L 112 3559 * * * 3295 820 * * * 2693 * * * * * 3437 * * * * 112 0 * * * * * * 3330 0 0 D 113 3603 * 1555 * * * * * * * * * * * 1959 2919 2411 * * * 113 0 * * * * * * 3330 0 0 F 114 * * * * 1130 * * 3577 * 2518 3385 * * * * * * 2404 * * 114 0 * * * * * * 3330 0 0 T 115 * * * 3559 * * * 2654 2095 3521 * * * * 3385 3603 3626 2505 * * 115 0 * * * * * * 3330 0 0 A 116 168 * * * * * * * * 3187 * * * * * * * * * * 116 0 * * * * * * 3169 0 0 V 117 2135 * * 3356 * * * * * 3461 * * * * 3448 3375 3187 1806 * * 117 0 * * * * * * 3169 0 0 K 118 3448 * * * * * * * 2426 * * * 3375 * 676 * * * * * 118 0 * * * * * * 3169 0 0 E 119 928 * * 1811 * * * * * * * * * 3487 * * * 3317 * * 119 0 * * 0 * * * 3154 0 0 //