HHsearch 1.5 NAME d1icha_ FAM FILE d1icha_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1icha_.a3m DATE Mon Mar 8 17:25:06 2010 LENG 87 match states, 87 columns in multiple alignment FILT 108 out of 463 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.3 EVD 0.3841 -1.6373 SEQ >ss_dssp CHHHHHHHHHSCSTTHHHHHHHHTCCHHHHHHHHHHCCSCHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHHTTCHHHHHHHHHHHC >sa_dssp EDBBEBAAECABDEEBDEAADEBEBDDEBBDEBEEECDEDEECBBCBAACCAEEEBEEEEDBCDCABEBAEECECDECCDDADEDEE >ss_pred CHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHC >ss_conf 914999999489789999999939898999999986789989999999999995189841209999999998898046999998519 >Consensus xxxlxxvxxxvxxxxWkxlarxLglxxxxIxxixxxxxxxxxxqxxxmLxxWxxxxgxxxatxxxLxxaLxxxxxxxlAexiexxLx >d1icha_ PATLYAVVENVPPLRWKEFVKRLGLSDHEIDRLELQNGRCLREAQYSMLATWRRRTPRREATLELLGRVLRDMDLLGCLEDIEEALC >UniRef50_C3XQ80(16-94:1642) Putative uncharacterized protein n=3 Tax=Branchiostoma floridae RepID=C3XQ80_BRAFL E=2e-14 s/c=1.01 id=23% cov=91% ---FYFTKEKV-SSDWKDLAFHLEFEQADIDNIAGRNPDD-KSRCMDLLEEWLKCKGER-ATMEVLMEALSKASLQSTVDGLKK--- >UniRef50_UPI0000E49297(37-117:1268) PREDICTED: similar to cryopyrin n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E49297 E=1e-08 s/c=0.75 id=18% cov=84% ----------IPPSYYEDVGISLGIPYAQLQAILSEKLKNFKNALMDVFMKWnVMQQPPHSNKRQLLADKLREIDLGDLSDEL----- >UniRef50_B3S620(123-201:1013) Predicted protein n=1 Tax=Trichoplax adhaerens RepID=B3S620_TRIAD E=2e-07 s/c=0.72 id=21% cov=90% PRPYFPVVAEMIGIKWMKLSRTL---DYEIpsRLIDSECKSQC-DKAVAALNSWYDKHGQ-GATVNKLKVALYEIGRKDIAEKI----- >UniRef50_C3Z8Q7(6509-6580:25209) Putative uncharacterized protein n=3 Tax=Branchiostoma floridae RepID=C3Z8Q7_BRAFL E=8e-08 s/c=0.81 id=22% cov=78% ------------ISNWKQVCTHLGCDDAFVHRFQQQYQDDTYLCCFNALKTWRDTfDINYDDKINILCQTLRICNYDHCA-------- >UniRef50_UPI0000E48D78(340-423:1149) PREDICTED: similar to ankyrin 2,3/unc44 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E48D78 E=2e-09 s/c=0.75 id=20% cov=97% --TLLAFARQIRPKNFYEIGQKLGFNKSELQHFEHRTLYNRKYANIQMLSRWISSQTSGPKAKQTLKLVWESVQDSSKAEKTEDS-- >UniRef50_D1LX78(932-998:1227) Neuralized PATS1 n=1 Tax=Saccoglossus kowalevskii RepID=D1LX78_SACKO E=4e-05 s/c=0.73 id=18% cov=44% -----------------------------------------------MLTDWIYSSGNTTLSIEMMLSYLEQMHREDVVDAIQQ--- >UniRef50_C3YP91(451-531:1118) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YP91_BRAFL E=9e-08 s/c=0.72 id=22% cov=79% ---------------WTRLGQELGLNRTVLDNIRRDYYFGNTKMAFQMLKAWRTKTPHGPlHYLPQLEETLQNMGKPDLAAAVQ---- >UniRef50_B3S915(797-880:885) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S915_TRIAD E=1e-06 s/c=0.65 id=19% cov=98% -SIFIDIADKIESTKLAEFGRKLHLSSNSINEIVDSN-NSRFWKVDRLLEAWY-SEFSSTTKLDTLLKVLCECREGKMAEKLKEEYC # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * P 1 * * * * * * * * * * * * 0 * * * * * * * 1 0 * * * * * * 2600 0 0 A 2 1411 * * * * * * * * * * * * * 2022 1983 * 3002 * * 2 0 * * * * * * 3983 0 0 T 3 * * * 1372 * * * 2840 * * * 3888 3889 * * * 2115 3209 * * 3 0 * * * * * * 5346 0 0 L 4 * * * * 2000 * * 4453 * 689 * * * * * * * 4649 * 4493 4 0 * * * * * * 5976 0 0 Y 5 * * 3619 3667 2393 * 5269 4702 * 3650 * 3799 * 3877 * * * * * 1452 5 0 * * * * * * 6159 0 0 A 6 2573 * 2583 4952 2483 * 4921 * * 3025 * * 4939 3217 4577 * 4026 4719 * 5917 6 55 4732 * 1000 1000 * * 6248 1000 0 V 7 4955 * * * 3130 * * 2623 * 2101 * * * * * * 5676 1189 * * 7 0 * * * * * * 6450 0 0 V 8 1346 5152 * 5206 5211 * * 3118 3898 3977 * * * * * 3912 * 2238 * * 8 0 * * * * * * 6520 0 0 E 9 3233 * 2279 1923 * * 5081 * 2873 * * 5030 * 5354 3431 4300 4074 * * * 9 0 * * * * * * 6597 0 0 N 10 4975 * * 2129 * 3906 3585 * 2499 4165 * 2931 * 4070 3464 5098 5453 * * 5414 10 0 * * * * * * 6681 0 0 V 11 * 5046 * * 5545 * * 2646 * 2374 2739 5485 * * * 5197 * 1335 * * 11 116 * 3688 * * * * 6836 0 0 P 12 5080 * 3453 3336 * 2761 5233 4223 4729 3642 5155 * 2135 * 4040 3539 4960 * * * 12 70 * 4401 * * 0 * 6893 0 1841 P 13 3583 * * 5175 3911 3871 5515 3562 5432 4315 * 5582 1652 * * 2764 * 4733 5220 5420 13 112 * 3738 * * 0 * 6926 0 1622 L 14 * * 4889 3892 * 5675 * 5670 3153 4882 * 4263 4240 3603 2257 1993 4616 5332 * * 14 54 5658 5874 1585 585 0 * 7030 1000 2211 R 15 * * 2121 2549 * * 4770 5830 2769 * 4903 3089 6060 4473 3820 5153 * * 5540 3900 15 27 5750 * 1000 1000 0 * 7208 1000 1000 W 16 * * * * 3629 * 5653 * * 5933 * * * * * * * 4796 321 4435 16 0 * * * * * * 7627 0 0 K 17 5940 * 5955 3637 * * 6866 4640 1460 5486 4945 4072 5091 4343 2554 4893 4503 5809 * 5954 17 0 * * * * * * 7628 0 0 E 18 5155 * 3807 2829 6375 * 6454 5884 2318 3741 6332 5052 4694 3771 2750 4346 3658 6315 * * 18 0 * * * * * * 7628 0 0 F 19 * 6246 * * 2435 * * 4129 * 872 5620 * * * * * 5373 2993 * 5153 19 0 * * * * * * 7652 0 0 V 20 1266 4340 * * 5714 1361 * * * * 4606 * * * * 6585 * 3738 * * 20 0 * * * * * * 7661 0 0 K 21 5273 6496 6771 4190 5370 * 6005 4209 3850 3780 6467 4972 5067 4510 1281 4854 4426 5750 * 4832 21 16 6538 * 0 * * * 7671 1000 0 R 22 3476 6361 * 2829 5430 * 2887 * 2222 4824 6440 3983 * 4676 3689 4801 4044 4656 * 5532 22 11 * 7078 * * * * 7679 0 0 L 23 * * * * 5619 * 6306 4710 * 220 4499 * * * * 6595 * * 5987 * 23 62 6708 4934 2000 415 0 * 7745 1000 1000 G 24 * * 3913 5040 * 698 4422 * 3604 6983 * 4068 5819 4568 5498 6858 * * * * 24 39 5786 6843 1998 416 1407 683 7683 1704 2146 L 25 * 4862 * * 2390 * * 2863 * 1187 4085 * * * * * * 3317 * 4685 25 0 * * * * 1550 603 7682 0 1988 S 26 6647 * 3106 3379 * 4560 5630 6651 3769 * 5554 3836 3366 6627 6058 1926 2755 7146 * * 26 16 6547 * 3170 170 0 * 7688 1000 1606 D 27 4277 6619 2240 2262 * 5455 5272 5731 4341 5326 * 3605 6489 3826 3635 6021 4467 6562 6653 4300 27 0 * * * * * * 7701 0 0 H 28 2920 * 3473 4234 * 3515 5700 5889 4241 * 6286 2732 3992 4605 4758 3081 4245 4352 * 5374 28 0 * * * * * * 7701 0 0 E 29 4458 * 2408 1759 4901 * 5459 6544 3760 * * 5847 * 3119 5972 5303 4423 3682 * 4980 29 16 6546 * 2000 415 * * 7884 1000 0 I 30 6221 * * * * * * 965 * 1593 4516 * * 6546 5853 * 6496 4061 * * 30 15 6603 * 1000 1000 * * 7884 1000 0 D 31 5775 * 1534 2621 * 5191 6409 * 3709 5549 * 4346 6642 3331 4540 4429 4758 6563 * 4596 31 0 * * * * * * 7884 0 0 R 32 3552 7189 4674 3303 * 4982 3685 4038 3453 4300 5109 2987 * 4326 3490 3781 6311 4436 * 5083 32 0 * * * * * * 7884 0 0 L 33 4297 5206 * * 3380 * * 877 7021 2903 5193 * * 5548 * 6398 5660 4062 * * 33 16 6492 * 1000 1000 * * 7884 1000 0 E 34 4113 * 3310 2138 * 5570 * 4341 2640 3874 * * * 3506 3604 4254 4120 5448 * 6377 34 26 * 5787 * * * * 7884 0 0 L 35 3476 6301 3955 3261 * 4764 3914 5453 3797 3660 4582 4061 * 3864 4591 3289 5769 4266 * 3895 35 33 * 5458 * * 885 1126 7871 0 1554 Q 36 5246 * 2284 2287 * 5747 7061 * 3516 5557 * 3209 * 3298 2919 4100 5988 6322 * * 36 57 6808 5060 1000 1000 1475 643 7664 1000 1964 N 37 5892 4185 4989 4368 4925 * 2242 * 4435 6678 * 1908 6283 5890 5223 * 4586 5453 4794 3005 37 107 5329 4426 701 1377 277 2519 7661 1772 2923 G 38 4619 * 5366 5180 6852 4033 6356 3973 3539 4335 5615 6575 2065 4001 3094 2932 5268 5653 * * 38 97 * 3950 * * 648 1466 7851 0 2879 R 39 6630 6463 2787 4738 * 2375 3841 * 3345 4591 * 2865 * 4711 3242 4196 5332 * * 4910 39 197 4904 3412 367 2155 790 1246 7750 2226 3947 C 40 5269 6871 1601 6571 6593 3131 5323 * 5298 * * 2092 * 5449 * 2888 6234 5572 * 5401 40 119 5927 3987 0 * 349 2220 7655 1538 4858 L 41 4365 5447 6638 * 5544 5575 6283 3587 6362 2637 6105 * 3988 5928 3619 3372 3115 2653 * 4043 41 82 6493 4493 0 * 396 2058 7723 1000 3835 R 42 5019 6513 4162 3181 4418 4702 5478 6456 3355 6642 5285 4574 5316 3624 3184 4498 3489 4295 6834 3501 42 0 * * * * 435 1941 7855 0 3767 E 43 4982 * 2526 1624 * 5339 4864 6777 4952 4945 * 4527 6193 3192 3704 4702 5641 6671 6406 6134 43 15 * 6611 * * 0 * 7786 0 1631 A 44 2718 4045 * * * 5191 6005 5007 3165 6822 6901 * 5095 1323 3386 5795 5724 6417 * 6451 44 29 * 5671 * * * 0 7795 0 1000 Q 45 2418 2670 * * 6486 4464 * 3261 4353 5142 5483 6106 5590 5971 5591 4898 4096 2188 * 6389 45 26 * 5780 * * 593 1569 7777 0 2269 Y 46 5643 * 6387 * 3190 * 3504 3956 5817 2967 4385 * 6245 4274 3572 5446 5657 4837 6641 1859 46 0 * * * * 623 1512 7783 0 2261 S 47 3256 6578 3521 2120 6714 6513 5095 6520 4262 4899 * 4684 * 2341 3643 4223 4609 6565 * * 47 0 * * * * 0 * 7812 0 1000 M 48 3296 6226 * * 6715 6399 * 5303 * 2229 1287 * * * * 6619 5104 2594 6644 * 48 0 * * * * * * 7816 0 0 L 49 * * * * 3720 * * 4359 * 243 5876 * * * * * * 6223 * * 49 0 * * * * * * 7816 0 0 A 50 5581 5375 6484 3312 6662 5746 5094 5262 2820 3002 6715 4286 * 3489 3140 4238 3977 4299 6607 4264 50 0 * * * * * * 7816 0 0 T 51 3590 6793 4417 3614 6882 6528 5043 4878 3256 3318 4727 6939 * 3756 2724 4279 3198 4676 * 5640 51 0 * * * * * * 7816 0 0 W 52 6307 5686 * * 6838 * 6561 * * * * 6543 * * * * * * 116 6018 52 105 5028 4671 0 * * * 7816 2155 0 R 53 5617 7016 * 4914 5603 * 4932 4229 2677 3754 5292 * * 3442 1827 4338 7031 3952 6748 3813 53 54 * 4760 * * 377 2120 7794 0 2880 R 54 6210 6407 2872 2961 * 6581 5981 * 3375 4956 3918 3391 * 2347 3041 4964 4896 6693 * * 54 17 6438 * 0 * 0 * 7770 1000 2973 R 55 6452 6023 5793 5095 * 4202 * 5204 2122 5160 3782 5663 * 3343 2083 3373 4201 6835 * * 55 44 5572 6774 0 * * * 7816 1752 0 T 56 5352 * 6713 2906 5748 5931 3703 * 4087 3699 4670 2555 6625 3185 4677 4111 3262 5492 6345 5670 56 190 5192 3383 0 * * 0 7839 1789 1000 P 57 4914 6609 5408 6380 6322 943 6410 * 4744 4703 6408 4590 2924 * 6441 4464 4352 6650 * * 57 81 6888 4447 1000 1000 880 1131 7771 1000 4377 R 58 4157 * 3231 3614 6444 5346 5559 * 4028 5130 4887 4162 4173 4126 3315 2129 4517 6615 * 5426 58 252 * 2643 * * 465 1859 7747 0 4049 R 59 4648 4948 3175 3678 * 2738 4172 6447 2443 * 4790 6559 6111 6121 3243 3269 5230 * * 5234 59 281 * 2500 * * 0 * 7809 0 5158 E 60 3352 * 3363 3082 5445 3405 * 6506 5491 * 6061 3281 4075 3587 4898 3015 3591 * * 4813 60 144 4966 3983 357 2189 114 3714 7732 1596 4648 A 61 901 6402 3072 5766 * 5406 5117 * 4905 4848 * 4430 5038 * * 5728 4481 4994 * 5437 61 91 6594 4309 1000 1000 226 2784 7769 1000 3647 T 62 4547 6569 4032 6738 6299 5805 * 5844 2896 4910 5603 6586 5169 * 5518 3740 1079 * * 4975 62 17 6436 * 0 * 711 1362 7709 1000 3145 L 63 5161 6792 * 6749 5269 6579 * 2918 3602 1949 4885 * 5035 * 3762 * 6056 1970 6334 5441 63 33 * 5474 * * 1022 978 7748 0 1638 E 64 4553 * 2497 2199 * 3594 6734 * 3476 6519 * 3816 4602 3203 3761 4482 5744 * 6449 * 64 16 * 6469 * * 0 * 7769 0 2226 L 65 3093 * 4191 3944 * 6088 4802 4680 3631 3679 4767 4038 6575 3409 3920 5012 3074 3568 * 6323 65 0 * * * * 0 * 7801 0 1000 L 66 6465 * * * 4271 * * 4507 * 281 5527 * * * * * * 4374 * * 66 0 * * * * * * 7800 0 0 G 67 3455 3805 6726 3774 4762 5052 6674 2380 3290 3056 4285 * * 5212 6502 5660 4340 3390 * 6704 67 0 * * * * * * 7746 0 0 R 68 4361 6889 4356 2344 * 4461 6428 * 2548 5859 * 4681 * 3051 3727 3549 3296 5681 * 6669 68 0 * * * * * * 7746 0 0 V 69 980 5654 5998 6384 * 4460 6047 4412 5715 5626 5714 * * * 6529 5000 3395 2941 * 6333 69 13 6782 * 1585 585 * * 7746 1000 0 L 70 6428 5083 * * 6351 * * * * 158 4906 * * * * * * * 5859 * 70 15 6599 * 2322 322 * * 7746 1000 0 R 71 6768 6192 5045 2847 6511 5038 5623 * 3656 5145 5807 5518 6628 3514 1699 3994 5546 3768 6190 5506 71 0 * * * * * * 7663 0 0 D 72 4614 * 2803 2559 * 5658 6588 * 2196 5350 * 3587 * 4555 3448 3443 3967 * * * 72 0 * * * * * * 7677 0 0 M 73 3246 2867 * * * 4984 * 2419 * 2841 3209 6884 * 6473 6856 2749 4775 3687 * * 73 0 * * * * * * 7677 0 0 D 74 * 6094 2630 3313 * 1274 6686 * 3078 * 6185 3516 * 5321 6194 5858 6383 * * 6332 74 0 * * * * * * 7664 0 0 L 75 * 5507 5690 3848 3853 * * 5768 4864 1801 3433 6366 * 4136 1918 * * 5937 * 4725 75 14 * 6728 * * * * 7619 0 0 L 76 5516 6153 4527 5384 5441 3699 4954 5138 3537 4977 5369 3751 4170 2917 2939 3965 4444 3688 * 6170 76 0 * * * * * 0 7454 0 1000 G 77 3941 * 1356 4140 * 3807 3981 * 3705 4479 * 6457 6622 5841 5024 3211 4876 * * 5675 77 0 * * * * 0 * 7454 0 1000 C 78 3614 4059 * * * * * 2753 5626 1480 4665 * 5424 * * 6383 3302 2688 * * 78 0 * * * * * * 7445 0 0 L 79 545 * * * * 6530 * 3515 6337 4621 * * * * 5331 5436 * 3117 * * 79 51 5518 6302 1849 469 * * 7445 1682 0 E 80 5459 * 1549 1300 * 4925 6292 * 5892 * 6419 4077 * 4063 5462 * * 6238 * * 80 0 * * * * * 0 7548 0 1000 D 81 3857 * 3515 2714 * 4728 * 4108 1758 4390 * * * 4188 5023 3354 6690 4593 * 5831 81 0 * * * * 0 * 7531 0 1000 I 82 * 6262 * * 6130 * * 1493 * 1619 6394 * * * * * 5596 2105 * 5228 82 0 * * * * * * 7547 0 0 E 83 5218 * 4562 1448 * * 5868 5734 2977 * * * * 2280 2489 * * * * 5850 83 0 * * * * * * 7383 0 0 E 84 * * 2453 1586 * 5262 * * 2664 * 5671 4838 * 4729 6480 3230 3842 5606 * * 84 46 4995 * 0 * * * 6972 1000 0 A 85 2724 3414 * 2707 * 4857 3951 3330 3116 * 5076 4954 * * 4086 2880 5001 * * * 85 0 * * * * * * 6424 0 0 L 86 * * * * * * * 3183 * 301 4858 * * * * * * * * 4505 86 0 * * * * * * 5953 0 0 C 87 * 0 * * * * * * * * * * * * * * * * * * 87 0 * * 0 * * * 3112 0 0 //