HHsearch 1.5 NAME d1hlva1 FAM FILE d1hlva1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1hlva1.a3m DATE Mon Mar 8 20:41:17 2010 LENG 66 match states, 66 columns in multiple alignment FILT 70 out of 74 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.0 EVD 0.4113 -0.2708 SEQ >ss_dssp CCCSSCCCCHHHHHHHHHHHHHCTTSCHHHHHHHHTCCHHHHHHHHHTHHHHHHHHHHHGGGGGTC >sa_dssp EEEEEEEBCCDDCBEBADCBEECEECEDDCAAEDCEBDEECAEDBCEDDEEBCDCCEECDEDAEEE >ss_pred CCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC >ss_conf 985300210999999999998287620899999828883459999987999975786418423469 >Consensus mxxKRkxLtlxeKxxiixxxexgxxxxqxxiArxfGixxSTvxxIlKnkekilxxxxxxgxxsxxr >d1hlva1 MGPKRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVASTCR >UniRef50_UPI0001926A63(6-68:472) PREDICTED: similar to Tigger transposable element-derived protein 6 n=1 Tax=Hydra magnipapillata RepID=UPI0001926A63 E=6e-11 s/c=1.09 id=31% cov=92% -GSMKRFYSIQKKCKALKDLETG--MSHKEVAKKYGVPKTTLSTWIKNKTKLLTSLEKNGTKS--- >UniRef50_UPI000155C4A7(19-72:598) PREDICTED: hypothetical protein n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155C4A7 E=6e-08 s/c=1.08 id=25% cov=83% ----RKSLSLAVKLDVLKCLDSGE--RQIDVCKAFGLAGSTVRTIIRNAAKI----REFGKTTT-- >UniRef50_B7Q5L6(112-170:651) Jerky, putative n=1 Tax=Ixodes scapularis RepID=B7Q5L6_IXOSC E=9e-05 s/c=0.82 id=32% cov=89% ---KRVVLTIRQKLEIIRLLEAGRMPK--ELAGEFGIGEQTVRDLRKSKEQLKHFSEESGDAS--- >UniRef50_B4KMW9(13-69:247) GI20766 n=4 Tax=Drosophila RepID=B4KMW9_DROMO E=0.0003 s/c=0.81 id=28% cov=88% ----RVQVSMDDKERAIARIRNGET--KAGISRELGVPESTVRGWVKRADQRMAREANEGSAT--- >UniRef50_C3XXX4(11-73:390) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3XXX4_BRAFL E=2e-10 s/c=1.07 id=28% cov=97% --PAKKTLTLGEKIEVIRRYEKGGTGARG-LAKEFGVGKTQIQNIVKRKREYLEDYEKNAPISKKR >UniRef50_UPI00017913B5(2-65:518) PREDICTED: similar to Tigger transposable element-derived protein 6 n=3 Tax=Acyrthosiphon pisum RepID=UPI00017913B5 E=6e-07 s/c=0.87 id=32% cov=76% ---KRRDLSAKQKCDLLKSYDVLPKISLRDAAARLNVSHCTLNRILKNRSNI-------------- >UniRef50_A7RUQ6(2-63:371) Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7RUQ6_NEMVE E=6e-07 s/c=0.89 id=31% cov=79% ---RRRELSLSEKIQLIHESQTGTK-SQRKLADIYQIGKTTVHEILKKKDDILKA----------- >UniRef50_UPI0000F2B3F2(175-226:832) PREDICTED: hypothetical protein n=2 Tax=Monodelphis domestica RepID=UPI0000F2B3F2 E=1e-06 s/c=1.05 id=33% cov=79% ---SREVLPISEKVKILDMIEK-EKKSYAEIARMYGKNESSIREVMKNKDKIRAS----------- >UniRef50_B8P9P7(73-135:371) Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8P9P7_POSPM E=0.0005 s/c=0.72 id=32% cov=91% -------LEHADRRRICEYSRQFPSLKQEEIAREFKVERSTVSKILKDRERWLKPDNEKPTSSRTR # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 2938 0 0 G 2 * * * * * 1344 * * 3165 * * * * * * 1312 3445 * * * 2 0 * * * * * * 3426 0 0 P 3 * * * * * 2800 * 3306 2987 * * 3459 2436 * 2480 2520 * * * * 3 0 * * * * * * 3597 0 0 K 4 5051 * * 4216 * * * * 482 * 5273 * * 4010 4961 3647 * * * * 4 0 * * * * * * 4785 0 0 R 5 * * * * * * 5499 * 2686 4624 * * * * 355 * * * * * 5 0 * * * * * * 5049 0 0 R 6 5574 * * 5616 * * 5247 4709 1090 5021 * * * * 1985 * 4717 3282 * * 6 31 5543 * 1000 1000 * * 5212 1442 0 Q 7 2801 6031 4496 4327 5396 * 6667 6068 4465 5680 4715 5229 5676 3676 4704 2849 2635 2909 * * 7 0 * * * * * * 5226 0 0 L 8 * * * * 3912 * * 2559 * 709 4787 * * * * 6085 * 4157 * 4468 8 28 5714 * 1000 1000 * * 5248 1000 0 T 9 * 5633 * 5624 * * * * * * * 5745 4706 * 5389 1407 995 * * * 9 0 * * * * * * 5248 0 0 F 10 4310 * 3745 * 5112 * 5624 2304 * 1181 3953 5389 5692 * * * 6369 4533 * 5714 10 0 * * * * * * 5248 0 0 R 11 3492 * 3086 2353 * 5003 6376 5389 2378 * 4531 4059 * 3591 4282 3880 4942 * * * 11 0 * * * * * * 5248 0 0 E 12 * * 1919 1271 * 6406 * * 4907 5195 6201 * * 2772 * * 5255 3998 * * 12 0 * * * * * * 5269 0 0 K 13 * * * * * * * * 239 * * * * 5294 2975 * * * * * 13 0 * * * * * * 5269 0 0 S 14 5752 3382 * 5336 * * * 2703 3915 1811 4441 * * 5973 3143 6393 5461 2968 * 5767 14 0 * * * * * * 5269 0 0 R 15 3384 5653 2763 2154 * 6211 5324 * 3203 * 5429 3971 * 3533 2772 5752 5211 * * * 15 0 * * * * * * 5269 0 0 I 16 2846 * * * * * * 1239 * 3191 3583 * * * * * * 2033 * * 16 0 * * * * * * 5269 0 0 I 17 * 2839 * * * * * 1073 * 1542 * * * * * * * 4590 * * 17 0 * * * * * * 5269 0 0 Q 18 4139 * 2805 2841 6425 5082 5488 6409 2178 5099 6240 5259 * 2495 3198 6724 * * * * 18 0 * * * * * * 5269 0 0 E 19 4618 6576 4217 3609 4519 * * * 3273 3340 3799 * * 5925 1627 4621 * * * 3127 19 0 * * * * * * 5269 0 0 V 20 4253 * * * 4091 * 2853 3407 * 2080 * * * * 5791 3645 * 2276 * 3116 20 0 * * * * * * 5269 0 0 E 21 5429 * 2370 1098 * * 4429 * 3820 6004 5507 5925 * 4769 3478 * 5752 * * * 21 0 * * * * * * 5269 0 0 E 22 3730 * 3166 2607 * 6240 * * 3152 4233 * 3392 * 4409 3067 3162 4073 4742 * * 22 50 * 4885 * * * * 5269 0 0 N 23 * * 5735 * 5667 605 4400 * 5455 5075 * 2665 * * * 5054 * * * 5924 23 243 * 2687 * * 0 * 5255 0 1529 P 24 4390 * * 1537 * 3687 4641 5907 3394 * * * 2020 5867 4360 4629 5299 * * * 24 347 * 2227 * * * 0 5158 0 3413 D 25 * * 5560 4366 * 3445 5830 5507 1666 * 4042 4975 5736 5085 5662 2902 2662 4993 * * 25 298 * 2420 * * 1087 918 5046 0 3948 L 26 3326 * * * 5586 4691 * 4076 5252 2450 2211 4134 4548 * 5689 6330 3991 2628 * * 26 110 * 3770 * * 236 2728 5016 0 3795 R 27 4948 * * * * 5206 * * 1581 * * * * 4660 2438 1441 6188 * * * 27 130 5443 3978 0 * 985 1015 5238 1000 2568 K 28 * 5424 * * * 4695 4574 * 1562 5020 * 4259 * 1451 4345 * * 4710 * 5560 28 167 * 3194 * * 795 1239 5237 0 2930 G 29 1997 * 5264 4685 5199 3716 * 4161 3582 5796 * * * * 4122 2418 3207 4165 * 6034 29 81 * 4191 * * 1561 597 5230 0 2864 E 30 3147 * 2190 1443 * 5172 * * 5254 * * 5199 * * * 2322 * 5707 * * 30 0 * * * * 0 * 5159 0 2825 I 31 5139 * * * * * * 1341 * 2145 * * * * * * * 1511 * * 31 0 * * * * * * 5269 0 0 A 32 492 3668 * * * 2884 * * * * * * * * 6016 4496 * 6065 * * 32 22 * 6065 * * * * 5269 0 0 R 33 3007 * 4320 4634 * 5117 * * 1861 * * 5295 * * 1449 5281 5736 4479 * * 33 0 * * * * * 0 5270 0 1000 R 34 3874 * 2898 1703 * * * 4563 3566 5121 3695 6105 * 4447 3046 3961 6359 * * * 34 15 * 6624 * * 0 * 5270 0 1000 F 35 * * * * 1266 * * 4424 * 2245 5478 * * * * * * 5754 * 1808 35 0 * * * * * 0 5268 0 1000 N 36 * * 3322 6346 * 555 * * 4665 * * 3237 * 4735 * 5363 * * * * 36 0 * * * * * 0 5268 0 1000 I 37 * * * * * * * 1707 5681 2216 5754 * * * 4878 * 5142 1403 * * 37 0 * * * * * 0 5268 0 1000 P 38 3124 * * 2874 * 2212 * * 6301 6012 * 3473 1945 * * 3029 5962 5917 * * 38 0 * * * * * 0 5268 0 1000 P 39 4323 * * 2161 * 4532 5136 6450 2652 * 6200 5917 4327 4633 2282 4751 3476 4994 * * 39 0 * * * * * 0 5268 0 1000 S 40 * 5136 * * * 4607 * * * * * 5296 6064 4081 5377 609 2957 * * 5478 40 20 6161 * 3170 170 0 * 5268 1000 1000 T 41 6295 * * * * * * * * * * 5370 * 4062 * 4363 227 * * * 41 0 * * * * * * 5269 0 0 L 42 5653 * * * * * * 1879 * 1719 * * * * * * * 1306 * * 42 0 * * * * * * 5269 0 0 S 43 4104 4101 * * * 4553 5486 * 5264 * * 4083 * 5044 1808 1312 * * * 6077 43 0 * * * * * * 5273 0 0 T 44 * 5790 2918 4052 * 3317 * * 2837 * * 3976 * 6028 3355 3899 1809 * * 5643 44 0 * * * * * * 5273 0 0 I 45 * 6226 * * 5058 * * 788 * 3742 * * * * * * * 2740 2706 * 45 0 * * * * * * 5273 0 0 L 46 * 4129 * * * * * 3276 3064 1283 3782 * * * 3855 * * 2975 4638 * 46 0 * * * * * * 5273 0 0 K 47 5459 * 4881 * * * 6001 * 502 * * 4135 * 5366 3198 5759 * 6272 * * 47 0 * * * * * * 5273 0 0 N 48 4971 * 3416 * * * 3802 * 3788 * * 1252 * 2880 2908 4593 * * * * 48 0 * * * * * * 5273 0 0 K 49 3416 * * 2901 * * * * 1049 * * * * * 1970 5747 * * 6049 * 49 0 * * * * * * 5273 0 0 R 50 4654 * 2170 1462 * 5734 4047 * 3912 * * 5979 * 4707 4615 3938 4117 6425 * * 50 0 * * * * * * 5254 0 0 A 51 4548 * 4675 2969 * * * * 1028 4555 5658 5104 * 3488 4386 3803 * * * * 51 0 * * * * * * 5216 0 0 I 52 * * * * 4319 * * 953 * 2531 * * * * 5266 * 5854 4737 4479 2891 52 21 * 6119 * * * * 5216 0 0 L 53 5834 * 5645 3272 * * * 3729 3167 1042 4729 * * * 2934 5785 * * * * 53 0 * * * * * 0 5022 0 1000 A 54 1839 * * 2923 3463 4319 5180 * 3580 * * 4615 * * 3878 4004 3213 * * 4116 54 0 * * * * * 0 5023 0 1000 S 55 3087 * 4050 * 4930 * * 4012 4198 3873 4215 3792 3285 * 3862 1704 * * * * 55 0 * * * * * 0 4998 0 1000 E 56 3740 5269 3449 2084 * * * * * 4005 * * * 3728 * 2482 4475 3630 5053 3333 56 0 * * * * 0 * 4840 0 1000 R 57 4119 * 3230 2206 * * * * * 4564 * 3682 * 2877 1898 4437 * 4370 * * 57 0 * * * * * * 4796 0 0 K 58 * * * 1989 * * * 5013 2007 4855 * 3907 * 3281 3351 4223 * 4284 4030 * 58 0 * * * * * * 4833 0 0 Y 59 2810 3907 * 3512 3072 4249 * * 2574 4480 * 2669 * * * 3175 * * * 4299 59 0 * * * * * * 4357 0 0 G 60 3184 * * * * 452 * * * * * * 3391 * * 3970 * * * * 60 0 * * * * * * 4357 0 0 V 61 3642 * 3771 4050 3517 * * * 4121 * * * 3741 * * 3891 1765 2286 * * 61 0 * * * * * * 4318 0 0 A 62 1463 * 3338 * * 3849 * 3741 3388 * * * * * * 2468 4121 4050 * * 62 0 * * * * * * 4318 0 0 S 63 * * * * * 2674 * * * * * 4262 * * 3543 1053 2162 * * * 63 0 * * * * * * 4209 0 0 T 64 * * * * * * 2949 * 2906 3088 * * * * 2752 2844 1592 * * * 64 0 * * * * * * 3660 0 0 C 65 * 1762 * * * * * * 2386 * * * * 2667 * 2572 2409 * * * 65 0 * * * * * * 3168 0 0 R 66 * * * * * * * * * * * * * * 0 * * * * * 66 0 * * 0 * * * 2932 0 0 //