HHsearch 1.5 NAME d1g3wa1 FAM FILE d1g3wa1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1g3wa1.a3m DATE Mon Mar 8 15:46:37 2010 LENG 61 match states, 61 columns in multiple alignment FILT 108 out of 329 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.6 EVD 0.4045 0.0296 SEQ >ss_dssp CCCHHHHHHHHHHHHHHHTCCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSCEECTTSBEEC >sa_dssp EEDDBECACDBAECADEEECDBDDEDABEDCEDDDEDBDECBDDADEDEDBDCCEECBAED >ss_pred CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCC >ss_conf 9734899999999999623898199999994899179999999999879878817993229 >Consensus LxxsxEdYLxxIxxLxxxxxxvxxxxiAxxLxvsxxSVsxmikkLxxxGlVxxexxxxvxL >d1g3wa1 LVDTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQM >UniRef50_A3DD26(5-63:130) Iron (Metal) dependent repressor, DtxR family n=17 Tax=Clostridiales RepID=A3DD26_CLOTH E=0.0003 s/c=0.78 id=18% cov=98% --ESAENYLETILILRQRIGQVRSIDIVNEMNFSKPSISYAMKQLRENGYISMDESGYITL >UniRef50_Q2NH57(6-66:238) Predicted metal-dependent transcriptional regulator n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NH57_METST E=1e-12 s/c=1.22 id=23% cov=98% --ENVEEYLETIYKKSLKDNMAKTTEISKDLNIAPGSVTQMLKKLEEEGYVNYYQYKGVQL >UniRef50_B3EDI8(3-62:241) Iron (Metal) dependent repressor, DtxR family n=1 Tax=Chlorobium limicola DSM 245 RepID=B3EDI8_CHLL2 E=1e-10 s/c=1.12 id=27% cov=98% --ESSEMYIQTIFRLTRKQSNASISEVAAALGFSLSTVSEKVKHLTHDGYLVHEWREHVSL >UniRef50_A4QDJ9(312-362:383) Putative uncharacterized protein n=5 Tax=Corynebacterium RepID=A4QDJ9_CORGB E=0.001 s/c=0.88 id=24% cov=75% --------LYAIAQLSKNGEMVSTGDIAHLMGVKPNALSMQRKQLLSRGLVEV-------- >UniRef50_C9RRT3(8-68:144) Iron (Metal) dependent repressor, DtxR family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRT3_FIBSS E=1e-10 s/c=1.11 id=21% cov=102% LSQSLEDYLEMVHMLRLANGIARVKDIAAALSVKMPSVAKAILELKKLGLVTQEPYSGVEL >UniRef50_C1BD41(12-72:227) Putative DtxR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1BD41_RHOOB E=3e-08 s/c=0.97 id=29% cov=102% LTPVVEDYLRTLFCLSARGDTTSTSALARCLHLATPTVSGMHRRLAGAGLIARPGLHRVTL >UniRef50_A3U5H7(10-72:229) Putative transcriptional regulator n=1 Tax=Croceibacter atlanticus HTCC2559 RepID=A3U5H7_9FLAO E=4e-05 s/c=0.78 id=23% cov=102% LTKSEEDYLKAIFQLMldSDNEKVGNNKLADYLNISPASVNNMVKKLKLKKLLKSERYAKLQL >UniRef50_A5CU24(6-67:224) SirR protein n=2 Tax=Clavibacter michiganensis RepID=A5CU24_CLAM3 E=3e-11 s/c=1.12 id=27% cov=90% -------YLKLIWSATEWtDQPMTVSRLADRLGIRPATASDGIRRLTAQGLVEHRPYGSIEL >UniRef50_A8SH40(3-63:131) Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SH40_9FIRM E=0.0001 s/c=0.79 id=27% cov=79% -------YLLAIYEVSRTHLDISSRSIAEKLGVTKPSVVRILNLLMEQGMIVKE------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * * * * 4258 * 147 4493 * * * * * * * * * 1 0 * * * * * * 4457 0 0 V 2 * * * * * 4065 4752 3790 * 4532 4612 * 4053 * * 2324 1302 4498 * 4751 2 0 * * * * * * 4692 0 0 D 3 4175 * 2443 1218 * * * * 5249 * * 3436 3834 4034 5233 4198 * * * * 3 0 * * * * * * 4904 0 0 T 4 3648 * * 4992 * * * 5506 5770 5390 * 4355 5468 * 3988 1301 2185 3958 * * 4 0 * * * * * * 5092 0 0 T 5 2669 * * 3358 6129 5856 * 3430 3649 3594 3257 * * * 4332 4688 2808 3029 * * 5 0 * * * * * * 5157 0 0 E 6 * 5654 6218 259 * * * * * 5939 5586 * 5764 4105 5860 * * * * * 6 0 * * * * * * 5286 0 0 M 7 * 6647 999 3216 * * 6018 5860 * * 3891 2540 * 3848 5654 5586 * * * * 7 0 * * * * * * 5286 0 0 Y 8 5473 * * * * * * * * 6003 * * * * * * * * * 56 8 0 * * * * * * 5519 0 0 L 9 * * * * * * * 2811 * 380 * * * * * * * 3492 * * 9 0 * * * * * * 5556 0 0 R 10 * * * 1586 * * * * 1563 3751 * * * 4025 3493 6009 5755 5122 * 4604 10 0 * * * * * * 5559 0 0 T 11 1459 * * 4988 6248 4831 5866 4350 * 4848 4375 5341 * 5648 5753 4972 2445 3068 * 6739 11 19 * 6248 * * * * 5559 0 0 I 12 * * * * * * * 497 * 2475 5334 * * * * * 5914 3829 * * 12 12 6880 * 0 * * 0 5539 1000 1000 Y 13 3431 6798 4817 * 2595 * 4372 * * 3019 * * * 6306 5617 6702 * * 4936 1151 13 0 * * * * * 0 5539 0 1000 E 14 4026 5304 3500 2524 * 6875 5170 4003 3833 3241 5179 5131 * 4133 3267 3967 5234 4772 6448 5584 14 0 * * * * 0 * 5539 0 1000 L 15 4073 * * 6827 6895 6632 * 3177 6889 511 7033 5508 * 6316 6358 * * 5117 * 6731 15 47 5608 6463 713 1359 * * 5555 1487 0 E 16 4528 4992 * 2542 * 4322 5105 3308 4218 3647 6613 5981 * 3146 4415 2413 5108 5806 * 5691 16 45 5021 * 507 1755 * 0 5549 1948 1000 E 17 4158 * 5816 1880 * 4449 5573 4884 3176 4199 6167 6432 * 2967 3172 3901 4122 * * * 17 52 4817 * 0 * * 0 5549 2192 1000 E 18 3640 6897 2928 2076 * 6505 5650 6643 2701 6721 * 4056 * 3999 3502 4906 4267 * 4559 * 18 35 5917 7132 0 * * 0 5549 1000 1000 G 19 5687 * 4452 3631 6285 1788 4661 * 2307 5202 * 2830 * 4228 5063 5071 5894 6320 * * 19 34 7369 5863 0 * 0 * 5550 1000 1528 V 20 5922 * 3286 2624 * 1553 6804 * 3617 4448 * 4769 6574 3624 6511 4218 6204 4830 * * 20 54 4768 * 548 1662 966 1035 5544 2134 1587 T 21 4009 * 4019 3614 5266 5604 5568 5546 4513 4284 4681 4185 2415 4979 5138 3938 3967 4656 6633 3476 21 90 4051 * 1892 453 0 * 5545 2544 1000 P 22 2198 * * * * 6661 * 3612 * 5110 5315 * 2677 * * 6846 5624 1149 * * 22 0 * * * * * * 5559 0 0 L 23 4963 6468 * 6374 * 5826 5248 5534 3418 4939 * 5583 4953 5751 1741 2045 3165 5778 * 6651 23 15 6552 * 0 * * * 5559 1000 0 R 24 3544 * * 5803 6480 5071 * 4264 * 4063 5960 2908 4634 3840 5004 3233 2513 2545 * * 24 0 * * * * * * 5559 0 0 A 25 3637 5489 * * * 3057 * 3827 2735 * * 4291 * 6670 3390 2739 2787 3243 * * 25 11 7046 * 0 * * * 5559 1000 0 R 26 3659 * 1365 2335 * 5655 6234 6878 4598 5133 6332 5712 * 5480 3696 5601 4393 6866 * 6041 26 14 6665 * 0 * * * 5568 1000 0 I 27 * * * * * * * 1269 * 1205 * * * * * * * 2725 * * 27 0 * * * * * * 5799 0 0 A 28 522 5012 * * * 4440 * 6400 * * * * * * * 2668 5479 4831 * * 28 0 * * * * * * 5799 0 0 E 29 4329 * 3527 1969 * 6701 5795 5916 2994 6081 * 4223 * 5022 2344 3710 4999 5610 * 6130 29 0 * * * * * * 5799 0 0 R 30 2369 6398 5585 3855 4256 6707 4588 4841 4387 5234 5396 * * 4964 2834 4589 5024 4743 4954 2699 30 0 * * * * * * 5799 0 0 L 31 * * * * 4013 * * 4983 6176 638 2382 * * * 6332 * 5684 5260 * * 31 0 * * * * * * 5799 0 0 E 32 5972 * 3346 3473 * 1305 4415 * 3873 * * 2859 * 4201 * 3580 * * * * 32 0 * * * * * * 5799 0 0 Q 33 * * * * 4552 * * 2850 6682 3332 7125 * * 5180 3956 5228 6723 899 * 4718 33 0 * * * * * * 5799 0 0 S 34 2959 * 6422 * * 6701 7175 * 2719 * * 6802 * 6724 4057 1134 2824 5972 * * 34 0 * * * * * * 5799 0 0 G 35 3334 * 5270 * * 6837 5565 * 2421 5237 4251 5517 1587 4757 2970 6938 5346 6219 * 6176 35 0 * * * * * * 5799 0 0 P 36 1848 * * * * 4176 * * * * * 5770 1430 6160 * 2135 * 4795 * * 36 0 * * * * * * 5951 0 0 T 37 3924 * * * * * * * * * * * * * * 932 1287 * * * 37 0 * * * * * * 5929 0 0 V 38 2897 * * * * * * 4996 * 4763 * * * * * 6382 4440 435 * * 38 0 * * * * * * 5929 0 0 S 39 4445 6491 * * 6664 * 5214 5786 6715 5776 * 3116 * * 5751 1583 1689 3601 * * 39 0 * * * * * * 5929 0 0 Q 40 4953 * 4583 1619 * 3997 5099 5517 3084 * 5051 4592 * 3710 3772 3758 5425 4310 * * 40 0 * * * * * * 5929 0 0 T 41 1973 * * * 5870 7072 6960 4360 6486 * 1142 4813 * 5269 * 5462 4600 6304 6890 4229 41 0 * * * * * * 5929 0 0 V 42 * 4918 * * 4561 * 6359 2138 * 1561 4026 * * * 5774 * * 1968 * 6518 42 0 * * * * * * 5929 0 0 A 43 4054 * 5716 5177 * 3720 5215 * 1490 6747 6898 3629 * 3490 2736 3985 5425 6603 * * 43 0 * * * * * * 5929 0 0 R 44 6036 * 6289 4994 * 6731 6486 6530 1309 5089 * 5308 * 4784 1623 5109 4406 6178 * * 44 0 * * * * * * 5929 0 0 M 45 * * * * 5782 * * 6289 * 134 4109 * * * * * * * * * 45 0 * * * * * * 5929 0 0 E 46 2458 * 3749 2385 * 5314 7088 5165 3550 4455 5581 5250 * 4146 4881 3412 4319 3873 * 6517 46 0 * * * * * * 5933 0 0 R 47 3705 * 3025 2043 * 4990 5535 * 2631 6572 * 5606 6665 3834 3520 3349 4408 * * * 47 0 * * * * * * 5930 0 0 D 48 3112 * 2957 2202 * 6462 5263 6793 2864 3401 4788 6521 * 3704 3191 5981 6559 * * * 48 0 * * * * * * 5932 0 0 G 49 6365 * 5008 4674 * 316 * * 4465 * * 4070 * 6729 * * * * * * 49 0 * * * * * * 5932 0 0 L 50 * * * * 3713 * * 5342 * 790 4939 * * * * * * 5589 5766 2007 50 0 * * * * * * 5932 0 0 V 51 6342 * * * * * * 1598 * 2495 6148 * * * * * * 1102 * * 51 0 * * * * * * 5932 0 0 V 52 4176 * 4591 2640 * * 4429 3726 4255 * * 3686 * 5375 4762 3300 2496 2966 * 5444 52 22 * 6045 * * * * 6027 0 0 V 53 6014 6404 * * 4580 * 2781 6089 5135 5145 5291 * * 4163 3086 4111 4131 2830 * 1948 53 36 6715 6052 1585 585 0 * 5867 1000 1000 A 54 3743 * 3630 1110 * 5689 * 3988 3765 * * * 5798 3672 4621 5178 4865 6266 * 6246 54 0 * * * * 0 * 5632 0 1000 S 55 4025 * 5367 3812 * 5074 6455 * 2616 * * 4118 1456 4165 3978 4028 * 5945 5644 * 55 0 * * * * * * 5550 0 0 D 56 * * 3149 5704 * 3074 4754 * * 5488 * 3757 * 6178 4052 4267 5204 * * 1111 56 0 * * * * * * 5597 0 0 R 57 5816 * * 3405 * 3005 4864 * 1531 * * 5845 * 3671 2117 4780 * * * 5644 57 0 * * * * * * 5522 0 0 S 58 4270 * 4533 5857 4604 1466 4033 5680 5786 * * 4285 3818 4496 4190 3273 5931 6119 * 5042 58 0 * * * * * * 5396 0 0 L 59 5014 * * * * * * 1389 * 2926 * * * * * * * 1193 5783 * 59 0 * * * * * * 5395 0 0 Q 60 * * * 2829 4282 * 5445 4451 3163 5820 * 5748 * 3221 3424 3036 2130 5816 * 5464 60 0 * * * * * * 5353 0 0 M 61 * * * * 5243 * * * * 100 4614 * * * * * * * * * 61 0 * * 0 * * * 5348 0 0 //