HHsearch 1.5 NAME d1ft8a2 FAM FILE d1ft8a2 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1ft8a2.a3m DATE Tue Mar 9 17:54:31 2010 LENG 82 match states, 82 columns in multiple alignment FILT 35 out of 39 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.6 EVD 0.4181 0.5386 SEQ >ss_dssp CEEEEEETTGGGSCHHHHHHHHHHHSSSCCCCEEEEEETTEEEEEECCHHHHHHHHTTTTCEECTTSCEECCEEEEECSTTC >sa_dssp ECCCACACEAEDBEDDCACECACEDBEDEBECDECCCDEDDAAABBDDDEBBEBADEACEEADBEEEDDBDADCEECDDDEE >ss_pred CEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEECCHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCC >ss_conf 9079991126735888999999974898636578899688699982763899999857984787899889999648898889 >Consensus xWykVtIpxGxkydKxwLlxxiqxxxxxxFxPvxfxxxxxxaxFfvddxxxAxaLxxxsrkIxxxdgxklxixVxxxxpPxx >d1ft8a2 NWFKITIPYGRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSAPPHT >UniRef50_Q7QK79(132-211:648) AGAP002193-PA n=5 Tax=Diptera RepID=Q7QK79_ANOGA E=2e-07 s/c=0.71 id=34% cov=98% -WYEVRIPYGNKYEKEFILRSIQQAITPQmFIPLYYKANESGAVFFVEDFQAADAIMRANRSIQTPDGRRMILVVRNNPPP-- >UniRef50_UPI0001925DEC(132-213:646) PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001925DEC E=4e-24 s/c=1.37 id=24% cov=100% DWFKVVVPEGKKHNRDWLLNKIKQIAKVSFEEVDYHTFKDNIVFFLKGQMIADAVQSASNIVTTKDGSKLFFTVRPSRPPN- >UniRef50_UPI000186D5E3(97-180:623) Nuclear RNA export factor, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186D5E3 E=2e-05 s/c=0.59 id=21% cov=99% DWYLVKLFYGAKYNEHDLHRlLLKHLAPHVFKFYFSFTNENHFYFYTDNYEVAVTLRNANRKILLEDGHLLVIRVKegvPSSVP-- >UniRef50_UPI0001792F1A(127-204:774) PREDICTED: similar to AGAP002193-PA n=2 Tax=Acyrthosiphon pisum RepID=UPI0001792F1A E=9e-19 s/c=1.21 id=29% cov=95% -WYSVFVPNVEDCDE--VLKIIQTYItPVVFYPYNKQYFDNALRFLVDDFKVAKTLHNTSYKITQRDDRKLVIKVCIYLPP-- >UniRef50_UPI000051A85E(124-205:634) PREDICTED: similar to small bristles CG1664-PA n=2 Tax=Apocrita RepID=UPI000051A85E E=2e-25 s/c=1.41 id=32% cov=100% NWYKITIPYGHKYDKDYIINNLLSYIaPETFIPFMYKVVGNEATFYVDDNKIAMALADSDRKITTTDGFKLQVRVSKAGFPQ- >UniRef50_UPI00006A6EDC(146-222:635) PREDICTED: similar to nuclear RNA export factor 1 n=1 Tax=Ciona intestinalis RepID=UPI00006A6EDC E=6e-23 s/c=1.40 id=31% cov=94% NWYQITILKGSTLDEEWLKQEIQTLAMVQFHPVQYHLDGNHSCFFVDDHVTAGTIRDCSRKITSPDGEKVAILMRP------ >UniRef50_Q9U1H9(113-191:672) Nuclear RNA export factor 1 n=12 Tax=Drosophila RepID=NXF1_DROME E=1e-18 s/c=1.19 id=22% cov=96% -WYQVTLQNAQIYEKETLLSALLaAMSPHVFIPQYWRVERNCVIFFTDDYEAAERIQHLGKNGHLPDGYRLMPRVRSGIP--- >UniRef50_A8NVI9(104-165:187) Putative uncharacterized protein n=1 Tax=Brugia malayi RepID=A8NVI9_BRUMA E=4e-10 s/c=1.07 id=25% cov=77% ---QIKVVRGATIGKDFIMRSIGQYVDDV-KPLLFRVDRGDITFFVEDDDTAAAIHAISRRVRDPN---------------- >UniRef50_UPI0000DB7302(40-114:492) PREDICTED: similar to nuclear RNA export factor 2 n=1 Tax=Apis mellifera RepID=UPI0000DB7302 E=6e-13 s/c=1.00 id=24% cov=90% -WHKIKILKGTEYDKETVLKAILNAIePAELIPVKYQINGEDTFFLARNCAHAlDKLCKTNLIIKNPEGDPLILIV-------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * N 1 * * 1311 * * * * * * * * 744 * * * * * * * * 1 0 * * * * * * 3168 0 0 W 2 * * * * * * * * * * * * * * * * * * 0 * 2 0 * * * * * * 4451 0 0 F 3 * 4773 * * 1601 * 2576 * * * * * * * * * * * * 1101 3 0 * * * * * * 4451 0 0 K 4 * * * 4869 * * * * 741 4581 * * * 2426 3856 3823 * * * * 4 0 * * * * * * 4518 0 0 I 5 * * * * 4083 * * 1422 * * 4921 * * * * * * 903 * * 5 0 * * * * * * 4518 0 0 T 6 * * * * 3823 * * 3185 2574 5221 * * * * 4869 * 1024 3339 * * 6 0 * * * * * * 4518 0 0 I 7 * * * * * * * 809 * 2843 * * * * * * * 1786 * * 7 0 * * * * * * 4570 0 0 P 8 * * * * 3547 * * * * 2936 * 4002 757 3978 * 5092 * 4770 * * 8 0 * * * * * * 4570 0 0 Y 9 * 5265 * 4421 3042 * 3447 * 3639 * * 1919 * * 3532 5526 * * * 1936 9 49 * 4907 * * * * 4570 0 0 G 10 2934 * * * * 282 * * * * * * * * * * * 4424 * * 10 0 * * * * * 0 4675 0 1000 R 11 3268 * * 3618 * * 3278 2976 1858 * * 3905 * 3949 3402 4680 4521 * * * 11 0 * * * * 0 * 4675 0 1000 K 12 * * 3299 4562 * * * 2519 912 * * 4364 * * 5318 * 3709 * * * 12 0 * * * * * * 4697 0 0 Y 13 * 4801 * 4878 4254 * 3742 4692 * 4726 * * * * * 4240 * * * 570 13 0 * * * * * * 4697 0 0 D 14 * * 1095 2340 * 4692 * * * * * 2213 4427 * * 4904 * * * * 14 0 * * * * * * 4697 0 0 K 15 * 4878 * 2527 * * * * 485 * * * * * 3683 * * * * * 15 53 * 4801 * * * * 4697 0 0 A 16 3815 * 1832 1803 5227 * 4501 * 4023 * 5274 * * * 4993 4417 2999 * * * 16 0 * * * * * 0 4671 0 1000 W 17 4417 * 4501 * 3228 * * * * 3963 * 4493 * 5294 * * 3188 5669 1049 4169 17 0 * * * * 0 * 4671 0 1000 L 18 * * * * * * * 2728 * 623 * * * * * * * 2323 * * 18 0 * * * * * * 4697 0 0 L 19 * * * * * * 4540 2239 4726 907 2764 * * * * * 5212 * * * 19 0 * * * * * * 4697 0 0 S 20 * * 5257 * 5212 * * * 1955 * * 1712 * 4726 2591 3290 5006 4427 * * 20 63 4540 * 0 * * * 4697 1000 0 M 21 2435 * * 4726 * * * 3839 4491 2524 5919 4192 * * 5046 2249 2496 * * * 21 0 * * * * * * 4697 0 0 I 22 * * * * * * * 831 * 1192 * * * * * * * * * * 22 69 4427 * 0 * * * 4697 1000 0 Q 23 * * 4427 * * 4692 5321 * 3127 2009 * * * 1105 4014 * * * * * 23 46 5007 * 0 * * * 4697 1000 0 S 24 3181 * 4070 3888 * 3707 4540 * 3977 * * 3145 * 3140 * 2195 2893 * * * 24 0 * * * * * * 4697 0 0 K 25 2909 * * 4304 5552 * 3675 4491 3931 2869 3258 * * 4615 4827 4343 5318 5257 * 2407 25 0 * * * * * * 4697 0 0 C 26 2997 1284 * * * * * 1992 * * 4936 * * * * 3213 * 3794 * * 26 366 2157 * 0 * * * 4697 2818 0 S 27 5044 * 4692 5046 * 4951 * * 3789 * 4726 5079 1139 * * 2033 5046 * * * 27 44 * 5044 * * * * 4697 0 0 V 28 3986 * 3253 3136 * * 3725 4212 * 3835 4052 * 3960 * * * * 1343 * * 28 0 * * * * 0 * 4687 0 1000 P 29 3458 * 4254 3493 4951 5303 4936 * * * * * 1555 3877 5821 4491 5357 2453 * * 29 155 3990 4692 0 * * * 4697 1532 0 F 30 * * * 5056 300 * * * * 2666 * * * * * * * * * * 30 0 * * * * 0 * 4645 0 1000 T 31 * * * 3485 * * 4747 1863 3626 * * 5113 * 3622 4959 * 1973 5803 4858 3875 31 0 * * * * * * 4710 0 0 P 32 4286 * * 4499 3335 * * * * * * * 359 * * * * 5272 * * 32 0 * * * * * * 4710 0 0 I 33 * * * 4959 5406 * 4005 3632 * 3346 * * * 3479 * * 4278 1149 * 3175 33 0 * * * * * * 4710 0 0 E 34 * * 2222 2695 3722 * 5026 * 4035 4703 5406 3875 5067 3110 * * 4858 * * 2703 34 0 * * * * * * 4710 0 0 F 35 * * * * 987 * * * 3875 * * * * * * 4553 * * 2655 2146 35 0 * * * * * * 4710 0 0 H 36 * * * * 4553 * 1212 * 3836 4914 5067 * * 2696 2781 4009 5026 * * * 36 0 * * * * * * 4710 0 0 Y 37 5095 5332 * * * * * 3520 4914 4747 * * * * * * 2811 2362 * 1148 37 0 * * * * * * 4710 0 0 E 38 * * 2300 1705 3663 * * 4503 5067 5272 5072 2752 * * * 4904 * 3324 * * 38 44 5067 * 1000 1000 * * 4710 1000 0 N 39 * * 3130 3799 * 1838 5321 * 1948 * * 4015 * 4470 2805 * * * * * 39 0 * * * * * * 4710 0 0 T 40 * * 2777 3462 * 4703 5332 * 4034 * 3403 1596 * 5178 * 3131 3797 * * * 40 0 * * * * * * 4710 0 0 R 41 4268 3222 3135 4227 * 3638 3355 * 3447 * * 3507 * 3634 3180 3991 4009 * * * 41 0 * * * * * * 4710 0 0 A 42 938 * * * 4553 * 5227 2915 * 3875 * * * * * 4154 4571 3186 * * 42 39 5227 * 0 * * * 4710 1000 0 Q 43 * 3764 * * 4571 * 3696 4111 * 5113 * * * 2941 4162 3298 2985 1922 * 4553 43 0 * * * * * * 4710 0 0 F 44 * * * * 0 * * * * * * * * * * * * * * * 44 0 * * * * * * 4710 0 0 F 45 * * * * 731 * * * * 3175 * * * * * * * * * 1802 45 0 * * * * * * 4712 0 0 V 46 3706 * * * * * * 4511 * 4439 4857 * 4997 * * * 2781 685 * * 46 0 * * * * * * 4712 0 0 E 47 * * 1268 2003 * * * * 4439 * * 4520 3692 3448 3706 * * * * * 47 0 * * * * * * 4712 0 0 D 48 * * 792 4857 * 3707 * * 4807 * * 2008 * * * 5206 * * * * 48 0 * * * * * * 4712 0 0 A 49 2862 3706 4781 * 1970 * 4691 * 4264 5055 * 4238 4133 4439 * 4131 4098 * * 3294 49 0 * * * * * * 4712 0 0 S 50 2410 5293 4781 2781 * 3960 5089 * 2302 * 4439 4423 * 5033 4163 3799 5768 4691 * * 50 0 * * * * * * 4712 0 0 T 51 1699 * * * * * 4517 2197 * * 4520 * * * * * 1945 2976 * * 51 0 * * * * * * 4712 0 0 A 52 84 * * * * 4141 * * * * * * * * * * * * * * 52 67 4469 * 0 * * * 4712 1000 0 S 53 4719 5598 2254 2751 4332 3586 * * 2872 * 4219 * * * * 2539 * 3838 * 5794 53 0 * * * * * * 4662 0 0 A 54 916 * 5093 5157 * 5406 * * 3593 * 5110 * * * 3235 * 2547 * * * 54 0 * * * * * * 4662 0 0 L 55 * * * * * * * 2223 * 438 * * * * * * * 4385 * * 55 0 * * * * * * 4662 0 0 K 56 4219 4397 * * * * 3722 * 1649 3809 4084 * * 2308 3628 4965 5406 * * 4820 56 0 * * * * * * 4662 0 0 A 57 3131 * 1992 * * 5406 4012 * 3653 * * 2199 * 3801 3607 3353 * * * * 57 0 * * * * * * 4662 0 0 V 58 2412 4681 * * * * * 2328 * 2656 5753 * * * * 4219 3068 2160 * * 58 0 * * * * * * 4662 0 0 N 59 * * 2863 * * 3235 * * * * * 2224 * * * 883 * * * * 59 0 * * * * * * 4662 0 0 Y 60 * 5181 5110 * * 4075 4002 * 5047 4397 * 4385 * * 1049 5037 * * * 2454 60 0 * * * * * * 4662 0 0 K 61 * * * * * * 4978 3391 1078 * * 4058 * 3978 3037 3214 4442 * * * 61 0 * * * * * * 4662 0 0 I 62 4498 * * * * 4012 * 350 * * * * * * * * * 3192 * * 62 0 * * * * * * 4662 0 0 L 63 * 3930 * * 5598 5753 3513 * 3703 3055 * * * 3269 4022 4169 1724 5068 4691 5771 63 55 4741 * 0 * * * 4662 1000 0 D 64 * * 1535 * * * * * 4881 2585 4820 3415 * 4726 * 4681 2212 4939 * * 64 0 * * * * * * 4662 0 0 R 65 * * 5771 2103 * 5068 * 4881 3265 * * * 1728 4741 3159 3713 4219 * * * 65 0 * * * * * * 4662 0 0 E 66 * * 832 2623 * * * * * * * 2919 * * * 5037 4313 * * 3988 66 0 * * * * * * 4662 0 0 N 67 * * 3253 * 3956 753 * * * * * 2215 * * * 5506 * * * * 67 44 * 5071 * * * * 4576 0 0 R 68 * * 4374 3244 2528 * 3694 * 3843 * * 5065 * 3157 2276 3556 * * * 3435 68 0 * * * * 0 * 4622 0 1000 R 69 * * * 4724 * * * * 744 3467 * * 4384 * 2282 * 5560 * * * 69 0 * * * * * * 4576 0 0 I 70 * * * * * * * 2320 * 938 4193 * 5076 * 4752 * * 2678 * * 70 0 * * * * * * 4501 0 0 S 71 3992 4222 * * 4295 * * 2521 * 3773 3167 * 5200 3510 * 2470 5132 2737 * * 71 0 * * * * * * 4501 0 0 I 72 * * * * 4295 * * 935 * 3591 * * 2807 * * 5076 * 2905 * 4752 72 0 * * * * * * 4501 0 0 I 73 * * * * 2536 * 4123 3034 3666 2887 * * * 4811 2233 * 3523 3339 * * 73 0 * * * * * * 4501 0 0 I 74 * * * * * * * 4152 4950 * 3750 * * * 5076 4811 4056 491 * * 74 0 * * * * * * 4501 0 0 N 75 * 4476 * 5395 * * * * 2924 4701 * 2358 * * 1477 2703 5054 * * 5439 75 69 4412 * 1585 585 * * 4381 1000 0 S 76 * * * * * * 3942 4435 4000 * * 4073 1057 * * 2199 3873 * * * 76 0 * * * * * * 4469 0 0 S 77 3498 2892 * * * 2100 * * * * * 4629 4837 * * 1401 * * * 3483 77 0 * * * * * * 4392 0 0 A 78 4257 * 4316 * * 3498 * 2572 * 3483 4541 * 3785 4566 2961 3180 5347 3483 * 4613 78 0 * * * * * * 4392 0 0 P 79 2745 * * * 2710 * * 5325 4547 * * * 951 * * * * 3145 * * 79 0 * * * * * * 4376 0 0 P 80 * * * * * * * * * * * * 0 * * * * * * * 80 0 * * * * * * 3767 0 0 H 81 * * * * 3262 * 2603 * * * * 3091 * 1771 * * * * * 1641 81 0 * * * * * * 2970 0 0 T 82 * * * * * * * * * * * * * * * 153 3315 * * * 82 0 * * 0 * * * 2254 0 0 //