HHsearch 1.5 NAME d1f2si_ FAM FILE d1f2si_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1f2si_.a3m DATE Wed Mar 10 21:42:23 2010 LENG 28 match states, 28 columns in multiple alignment FILT 2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.1 EVD 0.5116 3.7137 SEQ >ss_dssp CCCCCCCCBCSSGGGSSTTCCEETTEEC >sa_dssp EECDEDECEBEEEEDCDEDBDCEEDDCD >ss_pred CCCCCEEHHHCCCHHHHHHHHHHCCCCC >ss_conf 9462010100452224766564216669 >Consensus ricpxiwmeckrdsdcxaxcicvxghcg >d1f2si_ RICPRIWMECKRDSDCMAECICVMGHCG >UniRef50_P10296(4-31:31) Elastase inhibitor 1 n=19 Tax=Cucurbitaceae RepID=IELI_MOMCH E=3e-06 s/c=1.90 id=83% cov=104% RICPLIWMECKRDSDCLAQCICVDGHCG # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * R 1 * * * * * * * * * * * * * * 0 * * * * * 1 0 * * * * * * 1104 0 0 I 2 * * * * * * * 0 * * * * * * * * * * * * 2 0 * * * * * * 1104 0 0 C 3 * 0 * * * * * * * * * * * * * * * * * * 3 0 * * * * * * 1104 0 0 P 4 * * * * * * * * * * * * 0 * * * * * * * 4 0 * * * * * * 1104 0 0 R 5 * * * * * * * * * 1000 * * * * 1000 * * * * * 5 0 * * * * * * 1104 0 0 I 6 * * * * * * * 0 * * * * * * * * * * * * 6 0 * * * * * * 1104 0 0 W 7 * * * * * * * * * * * * * * * * * * 0 * 7 0 * * * * * * 1104 0 0 M 8 * * * * * * * * * * 0 * * * * * * * * * 8 0 * * * * * * 1104 0 0 E 9 * * * 0 * * * * * * * * * * * * * * * * 9 0 * * * * * * 1104 0 0 C 10 * 0 * * * * * * * * * * * * * * * * * * 10 0 * * * * * * 1104 0 0 K 11 * * * * * * * * 0 * * * * * * * * * * * 11 0 * * * * * * 1104 0 0 R 12 * * * * * * * * * * * * * * 0 * * * * * 12 0 * * * * * * 1104 0 0 D 13 * * 0 * * * * * * * * * * * * * * * * * 13 0 * * * * * * 1104 0 0 S 14 * * * * * * * * * * * * * * * 0 * * * * 14 0 * * * * * * 1104 0 0 D 15 * * 0 * * * * * * * * * * * * * * * * * 15 0 * * * * * * 1104 0 0 C 16 * 0 * * * * * * * * * * * * * * * * * * 16 0 * * * * * * 1104 0 0 M 17 * * * * * * * * * 1000 1000 * * * * * * * * * 17 0 * * * * * * 1104 0 0 A 18 0 * * * * * * * * * * * * * * * * * * * 18 0 * * * * * * 1104 0 0 E 19 * * * 1000 * * * * * * * * * 1000 * * * * * * 19 0 * * * * * * 1104 0 0 C 20 * 0 * * * * * * * * * * * * * * * * * * 20 0 * * * * * * 1104 0 0 I 21 * * * * * * * 0 * * * * * * * * * * * * 21 0 * * * * * * 1104 0 0 C 22 * 0 * * * * * * * * * * * * * * * * * * 22 0 * * * * * * 1104 0 0 V 23 * * * * * * * * * * * * * * * * * 0 * * 23 0 * * * * * * 1104 0 0 M 24 * * 1000 * * * * * * * 1000 * * * * * * * * * 24 0 * * * * * * 1104 0 0 G 25 * * * * * 0 * * * * * * * * * * * * * * 25 0 * * * * * * 1104 0 0 H 26 * * * * * * 0 * * * * * * * * * * * * * 26 0 * * * * * * 1104 0 0 C 27 * 0 * * * * * * * * * * * * * * * * * * 27 0 * * * * * * 1104 0 0 G 28 * * * * * 0 * * * * * * * * * * * * * * 28 0 * * 0 * * * 1104 0 0 //