HHsearch 1.5 NAME d1dx5i2 FAM FILE d1dx5i2 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1dx5i2.a3m DATE Mon Mar 8 16:10:44 2010 LENG 35 match states, 35 columns in multiple alignment FILT 3 out of 7 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.3 EVD 0.4492 2.3514 SEQ >ss_dssp CCCCSSCEECEECTTSTTCEECCTTCCEETTTEEC >sa_dssp DEBEEEDCECDDDEEDEEDCECCEECEDDEEEDAD >ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEC >ss_conf 95576667634688788775487633642665819 >Consensus mfcnqtxcpadcdpnxxxxcxcpxgyilddgxict >d1dx5i2 MFCNQTACPADCDPNTQASCECPEGYILDDGFICT >UniRef50_UPI00017977B3(152-186:322) PREDICTED: similar to thrombomodulin n=1 Tax=Equus caballus RepID=UPI00017977B3 E=2e-09 s/c=1.81 id=81% cov=103% MFCNQTACPADCDPNNPSNCQCPEGYILDDGVICT >UniRef50_UPI0001555761(397-426:583) PREDICTED: similar to thrombomodulin n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555761 E=8e-06 s/c=1.72 id=61% cov=89% LFCNQTQCPADCDPSPEGPCSCPAGYILEE----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * 1447 659 * * * * * * * * * 1 0 * * * * * * 1369 0 0 F 2 * * * * 0 * * * * * * * * * * * * * * * 2 0 * * * * * * 1369 0 0 C 3 * 0 * * * * * * * * * * * * * * * * * * 3 0 * * * * * * 1369 0 0 N 4 * * * * * * * * * * * 0 * * * * * * * * 4 0 * * * * * * 1369 0 0 Q 5 * * * * * * * * * * * * * 0 * * * * * * 5 0 * * * * * * 1369 0 0 T 6 * * * * * * * * * * * * * * * * 0 * * * 6 0 * * * * * * 1369 0 0 A 7 659 * * * * * * * * * * * * 1447 * * * * * * 7 0 * * * * * * 1369 0 0 C 8 * 0 * * * * * * * * * * * * * * * * * * 8 0 * * * * * * 1369 0 0 P 9 * * * * * * * * * * * * 0 * * * * * * * 9 0 * * * * * * 1369 0 0 A 10 0 * * * * * * * * * * * * * * * * * * * 10 0 * * * * * * 1369 0 0 D 11 * * 0 * * * * * * * * * * * * * * * * * 11 0 * * * * * * 1369 0 0 C 12 * 0 * * * * * * * * * * * * * * * * * * 12 0 * * * * * * 1369 0 0 D 13 * * 0 * * * * * * * * * * * * * * * * * 13 0 * * * * * * 1369 0 0 P 14 * * * * * * * * * * * * 0 * * * * * * * 14 0 * * * * * * 1369 0 0 N 15 * * * * * * * * * * * 659 * * * 1447 * * * * 15 0 * * * * * * 1369 0 0 T 16 * * * * * * * * * * * 1659 1447 * * * 1659 * * * 16 0 * * * * * * 1369 0 0 Q 17 * * * 1447 * * * * * * * * 1659 1659 * * * * * * 17 0 * * * * * * 1369 0 0 A 18 1659 * * * * 1447 * * * * * * * * * 1659 * * * * 18 0 * * * * * * 1369 0 0 S 19 * * * * * * * * * * * 1659 1447 * * 1659 * * * * 19 0 * * * * * * 1369 0 0 C 20 * 0 * * * * * * * * * * * * * * * * * * 20 0 * * * * * * 1369 0 0 E 21 * * * 1659 * * * * * * * * * 1659 * 1447 * * * * 21 0 * * * * * * 1369 0 0 C 22 * 0 * * * * * * * * * * * * * * * * * * 22 0 * * * * * * 1369 0 0 P 23 * * * * * * * * * * * * 0 * * * * * * * 23 0 * * * * * * 1369 0 0 E 24 1447 * * 659 * * * * * * * * * * * * * * * * 24 0 * * * * * * 1369 0 0 G 25 * * * * * 0 * * * * * * * * * * * * * * 25 0 * * * * * * 1369 0 0 Y 26 * * * * * * * * * * * * * * * * * * * 0 26 0 * * * * * * 1369 0 0 I 27 * * * * * * * 0 * * * * * * * * * * * * 27 0 * * * * * * 1369 0 0 L 28 * * * * * * * * * 0 * * * * * * * * * * 28 0 * * * * * * 1369 0 0 D 29 * * 659 1447 * * * * * * * * * * * * * * * * 29 0 * * * * * * 1369 0 0 D 30 * * 659 1447 * * * * * * * * * * * * * * * * 30 0 * * * * * * 1369 0 0 G 31 * * * * * 0 * * * * * * * * * * * * * * 31 0 * * * * * * 1126 0 0 F 32 * * * * 1000 * * * * * * * * * * * * 1000 * * 32 0 * * * * * * 1126 0 0 I 33 * * * * * * * 0 * * * * * * * * * * * * 33 0 * * * * * * 1126 0 0 C 34 * 0 * * * * * * * * * * * * * * * * * * 34 0 * * * * * * 1126 0 0 T 35 * * * * * * * * * * * * * * * * 0 * * * 35 0 * * 0 * * * 1126 0 0 //