HHsearch 1.5 NAME d1dgja2 FAM FILE d1dgja2 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1dgja2.a3m DATE Mon Mar 8 18:04:23 2010 LENG 80 match states, 80 columns in multiple alignment FILT 104 out of 462 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.9 EVD 0.4200 0.3017 SEQ >ss_dssp CEEEECEETTBCCEEEECTTCBHHHHHHHTTCCTTSCCSSSSSSSCTTEEEETTEEEEGGGCBGGGSCTTCEEECGGGTC >sa_dssp EDEBCADBCEEEDEBEACCECCABDAACEDCECDCBDDEDDEBEDCDADADBDEEECDABDCDADEBDDEADACBEDDEE >ss_pred CCEEEEEECCEEEEEECCCCCCHHHHHHHCCCCCEECCCCCCCCCCEEEEEECCEEEHHHHHHHHHHCCCCEEEEECCCC >ss_conf 97199999999999846998894888971069870324689877741399999989013352487624997899834789 >Consensus mxxixxxvNGxxxxvxvxxxxtLlxxLRxxxxlxxxkxxCxxGxCGaCtVxvnGxxvxaCxtxxxxxxxgxxVxTvEgLG >d1dgja2 METKTLIVNGMARRLLVSPNDLLVDVLRSQLQLTSVKVGCGKGQCGACTVILDGKVVRACIIKMSRVAENASVTTLEGIG >UniRef50_A7UU59(12-103:1234) AGAP006221-PA n=1 Tax=Anopheles gambiae RepID=A7UU59_ANOGA E=3e-15 s/c=0.90 id=28% cov=100% LSEVTFTINGIAYTAKTENlslDTSLNTFIRNHAHLSGSKFMCLEGGCGACIVNVSGlHPVtketkswsaNSCLLPVFA-CHGLDVKTVESLG >UniRef50_D0KZ32(1-87:504) Xanthine dehydrogenase, small subunit n=2 Tax=Gammaproteobacteria RepID=D0KZ32_HALNC E=1e-14 s/c=0.93 id=30% cov=99% MNTLRFLLGQELIELEsVSPTLTVLNYLREEEKRIGTKEGCAEGDCGACTVVIaevvddrlHYRAVNACIVFLATL-DGKQLLTVEDL- >UniRef50_D0J469(10-87:189) (2Fe-2S)-binding protein n=25 Tax=Proteobacteria RepID=D0J469_COMTE E=9e-10 s/c=0.83 id=27% cov=91% ------TINRKQVgPVDVPKDLMMIEFLQEYAGMNGTRLGCGQGVCRACTIIVDDpekgsITVPACVTGVT-WLNGKTIRTVEGI- >UniRef50_B1I1F3(3-77:998) Molybdopterin oxidoreductase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1F3_DESAP E=2e-07 s/c=0.76 id=31% cov=89% MEAVEFTINGLPVRVPGKGATILEAALRN--GIYIPHLCHhpdlkPAGLCRVCMVEADGKMVAACRTP---VADGMKVAT----- >UniRef50_C7RFZ6(14-88:877) Selenium-dependent molybdenum hydroxylase 1 n=14 Tax=Bacteria RepID=C7RFZ6_ANAPD E=4e-14 s/c=1.05 id=32% cov=95% -DPIIVKINGKKY--ETYEDKTLLRFLRDDLHITSVKDGCSQGACGTCTVLVGDSKKLSCTQKLSKLKD-EEILTIEGL- >UniRef50_A1RZ94(20-91:219) Succinate dehydrogenase subunit B n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ94_THEPD E=9e-10 s/c=0.90 id=29% cov=85% ----------RAYEVDVDPDTSVLDALEKvsleqDPTLTFEH-ACHHGVCGACGMVINGVERLACVTRIGEVARGGVVV-VEPL- >UniRef50_A0KK96(1-80:965) Possible hypoxanthine oxidase XdhD n=8 Tax=Gammaproteobacteria RepID=A0KK96_AERHH E=1e-09 s/c=0.81 id=28% cov=94% -----FTLNGALRTVITPAGENAQRVLFNQCRMHSVRNSdDGFGFAGSDAILFNGKVINA-SLLIAAQLEGAQVRTAESLG >UniRef50_Q6LYC4(1-81:494) Uncharacterized iron-sulfur protein MMP1067 n=6 Tax=Methanococcus RepID=Y1067_METMP E=8e-08 s/c=0.71 id=29% cov=95% MKTFTITVKKTEgfKKFEVPVGLTILDALEYINKTYGeniqFRSSCKAGQCGSCAVMINKKSKLACKTKVE---DNMIIEPLEG-- >UniRef50_C6IWL4(19-107:121) Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWL4_9BACL E=3e-05 s/c=0.56 id=29% cov=95% MATVTLNVvrgdaeSGaslEKYEVPFRDGMSLLDaifWIREHVDPsFSVRYSCRSAnACKECSAFVDGKPGYLCSI---RAVPGSEVK-IEPL- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * 2385 379 * * * * * * 4669 * * 1 0 * * * * * * 4504 0 0 E 2 3350 * 3490 2453 * * 5192 * 4288 * * 3408 3276 3483 5027 2560 3951 * * * 2 0 * * * * * * 4582 0 0 T 3 2895 * 3771 3735 * 4967 * * 4365 5301 * 5386 4445 * 5118 3926 1162 * * * 3 28 5688 * 1000 1000 * * 4813 1000 0 K 4 * * * * 3701 * 4507 1168 5741 2762 4501 * * * 4506 * * 2856 * 4578 4 0 * * * * * * 4906 0 0 T 5 4043 * * 4505 * 5422 * 4795 4732 5870 * * 4825 3694 4175 2012 1531 5688 * * 5 56 5775 5657 2000 415 * * 4987 1000 0 L 6 * 6155 * * 1221 * * 2629 * 1937 4772 * * * * * * 3359 * * 6 0 * * * * 0 * 5191 0 1000 I 7 5984 * 6936 3468 5206 * 4667 5377 3187 4845 * 4489 * 6586 4296 4294 1168 6169 6586 5367 7 0 * * * * * * 5252 0 0 V 8 * * * * * * * 2088 * 1522 * * * * * * * 1263 * * 8 51 4834 * 2585 263 * * 5325 1461 0 N 9 * * 3318 * * 6145 * * 4608 * * 305 * * * 5655 6034 * * * 9 0 * * * * * * 5354 0 0 G 10 * * 4707 * * 349 * * 4288 * * 5492 * 4780 5973 5403 5208 * * * 10 29 5655 * 1585 585 * * 5354 1000 0 M 11 3656 * 5845 1915 6045 * 5945 4674 2494 5831 7010 5605 * 2997 3791 4717 3772 4823 * * 11 42 6637 5720 2322 322 * * 6057 1000 0 A 12 3486 * 3941 2326 * * * 5444 3355 3908 5980 5391 3041 3928 4448 4672 3233 4984 6796 * 12 48 4926 * 1190 832 * 0 6076 1994 1579 R 13 5666 * * 5495 3541 * 3700 4481 5251 * 6576 * * 5019 3211 * 5396 1929 * 1793 13 70 4767 6581 1173 845 0 * 6094 1906 1579 R 14 5968 * 4621 1864 6661 * 4538 * 4368 5614 * * 4111 3669 3890 3591 2156 4816 * * 14 23 * 6004 * * * 0 6104 0 1000 L 15 4593 * 5718 5076 3791 5299 * 2986 * 2751 * * * * 5731 * 5010 1036 * * 15 28 5705 * 0 * 960 1041 6078 1495 1633 L 16 4229 * 2519 1561 7039 * 6934 5595 4861 7064 * 6850 3072 4365 6024 4014 3607 6343 7106 * 16 161 3426 6346 662 1443 0 * 6109 3212 1000 V 17 2686 5234 * 6017 4980 4659 5485 3327 * 4844 * * 4712 * 6546 5648 4321 1200 * 5610 17 13 6764 * 0 * * 0 6122 1000 1000 S 18 4006 * 2510 2614 * 5829 7456 * 4405 6936 5324 3875 2677 5606 3781 3671 4119 * 5465 5739 18 22 6020 * 0 * * 0 6122 1562 1000 P 19 2610 6034 3990 3292 * 3933 6982 5465 3926 * * 5175 1429 * 4848 4675 6526 6611 * * 19 24 5905 * 1122 887 0 * 6122 1571 1000 N 20 4312 6385 2780 3961 * 1766 3608 * 7225 5774 * 4071 * 4462 3473 3303 5738 * * 6387 20 64 4533 * 1503 628 * * 6134 2541 0 D 21 4446 6654 3973 2365 * * 6907 * 3878 2802 3197 * 6948 4199 4722 * 2016 * 6653 * 21 10 7173 * 0 * * * 6134 1000 0 L 22 6062 6505 6248 * * * 6596 5911 7127 3642 4746 3939 4095 * 3132 2462 1511 5839 6418 6641 22 14 6744 * 1585 585 * * 6134 1000 0 L 23 4897 * * * * * * 3384 * 720 5384 * * * * 6545 5368 2289 * * 23 11 7000 * 1585 585 * * 6134 1000 0 V 24 3178 * * 5143 * 5694 * 4011 * 739 * 5548 * 5139 6505 4068 * 4330 * 6529 24 0 * * * * * * 6134 0 0 D 25 4729 * 1552 2605 * 5614 4499 * 6079 * * 5369 * 4456 5013 3881 3451 5295 4149 4812 25 19 6285 * 1585 585 * * 6134 1000 0 V 26 2121 6351 * * 3059 6847 5812 6062 * 3151 * * * * * 5782 4083 1873 5410 3183 26 15 6553 * 1585 585 * * 6134 1000 0 L 27 6080 6795 * * * * * 2848 * 325 * 6210 * 6062 * * * 6545 * * 27 192 3110 6833 1727 519 * * 6134 3014 0 R 28 * * * 4719 5136 * 3660 * 3985 5733 6434 4897 * 5061 560 6412 * * * 7045 28 130 3942 5548 2051 398 0 * 6129 2708 1000 S 29 5952 * 2508 1966 * 6053 4424 5717 4463 6253 * 2656 * 6457 3733 4746 4043 4938 * 4743 29 109 5075 4547 1837 474 0 * 6147 1898 1490 Q 30 5333 5200 3002 3217 6396 * 3267 3645 4163 6610 * 4131 6893 3052 2583 6505 4694 5686 * 4974 30 127 * 3570 * * 1437 665 6057 0 2090 L 31 4227 4391 3634 5668 4371 5511 6352 3835 4137 1447 5403 5398 3913 6910 5515 5861 6492 4651 6575 * 31 12 * 6952 * * 163 3223 6017 0 3533 Q 32 6821 6636 2481 4962 * 1655 3505 * 3968 6623 * 5876 3851 4252 3996 4241 4799 * * * 32 18 * 6329 * * * 0 6113 0 1539 L 33 4683 5321 5003 6669 6621 * * 3991 6515 1308 3975 6482 3562 5816 5256 3803 4260 4914 * 4412 33 64 4920 6604 983 1017 565 1625 6098 1941 1888 T 34 6982 5278 5891 * 3969 6372 5127 3971 3680 2977 6557 5229 4023 5642 7086 5536 1463 5756 * 4404 34 136 3716 6197 1012 988 1087 918 6107 2649 1522 S 35 3202 * 4457 5023 4169 1228 * 5889 * 6614 * * * * * 1892 5607 * 6024 * 35 38 6594 5969 2000 415 972 1029 6086 1000 1609 V 36 4407 5740 * * 3287 * * 3921 6520 3790 6795 * 3863 * * 4994 1945 1975 * 4076 36 48 5597 6393 1092 913 634 1491 6101 1520 2050 K 37 5526 * 4956 5020 * * 4441 * 1161 6020 * * 6366 * 1342 * * * * * 37 32 * 5526 * * 0 * 6092 0 1684 V 38 4298 4425 4402 4071 3972 4939 5738 3944 3942 3018 5461 4657 5607 5687 3970 4717 * 3593 5291 3124 38 0 * * * * 0 * 6109 0 1290 G 39 4321 4462 6385 * 6428 1361 * 6080 * 6387 5548 4340 5013 6448 * 1709 7139 4680 * * 39 57 4698 * 398 2053 * * 6134 1788 0 C 40 * 170 4677 * * * 4592 * * * * * * * * 5022 * * * * 40 70 4402 * 1828 477 * * 6140 2318 0 G 41 3676 * 3517 3476 * 1885 5275 * 4424 4456 * 5365 4338 6214 2345 4568 5076 * * * 41 0 * * * * * * 6140 0 0 K 42 3536 * * 2755 5143 4788 2852 4377 5172 7287 5730 5113 * 2812 4146 3380 3716 4022 * * 42 0 * * * * * * 6140 0 0 G 43 2967 * * * * 309 * * * * * * * * 6359 4538 6677 * * * 43 19 6290 * 0 * * * 6140 1000 0 Q 44 3384 * 3090 3125 5143 3819 * 3109 5041 4345 5848 6142 * 3931 5004 4487 5833 2418 * * 44 0 * * * * * * 6140 0 0 C 45 5143 104 * * * * * * * * * 5330 * * * * 5957 * * * 45 0 * * * * * * 6140 0 0 G 46 * * 6065 * * 222 6233 * 5461 * * * * * 3834 6668 * * * 6424 46 0 * * * * * * 6140 0 0 A 47 1076 6528 * 6290 * 6778 * 6065 5779 5830 * 5720 * * 6359 1955 3315 4247 * * 47 0 * * * * * * 6140 0 0 C 48 5957 189 3858 * * * * * * * * * * * * 4722 * * * * 48 0 * * * * * * 6140 0 0 T 49 1891 * * 7167 * 4153 6837 5000 5392 4755 4445 7036 * * 6671 3690 1347 4952 * * 49 0 * * * * * * 6140 0 0 V 50 4967 6772 * * * * * 2714 * * 2682 * * * * 5577 * 667 * * 50 16 6537 * 3000 193 * * 6140 1000 0 I 51 5559 * * 4286 4880 6867 3962 3033 3900 1809 3641 4751 * 5179 3093 * 5452 4279 * 6665 51 28 5707 * 3194 167 * * 6134 1514 0 L 52 5906 * 6628 * 3672 * * 1950 * 2722 4893 * * * * 6045 * 1199 * * 52 40 5185 * 2706 240 * * 6134 1762 0 D 53 6045 * 1334 4403 * 5067 6819 * 5477 * * 1303 * * 5742 4466 6542 * * * 53 34 5426 * 2887 209 * * 6134 1538 0 G 54 * * 3449 5544 * 406 5126 6445 5304 * * 5339 * * * 6231 * * * 5120 54 118 3669 * 2476 286 * * 6134 3109 0 K 55 5877 6683 6061 2762 * * 5179 6582 2007 5657 6650 4733 * 4140 2133 6691 4343 3282 * 6646 55 30 5616 * 2000 415 * * 6134 1616 0 V 56 2149 5601 6685 5105 * 7177 6448 6060 6691 3966 5281 4773 1632 5473 6797 4013 4703 3452 * * 56 12 6867 * 2585 263 * * 6134 1000 0 V 57 4484 6357 * 6483 6498 4916 * 3258 4078 4550 4214 * * 6934 2897 * 4972 1142 * * 57 14 6663 * 3170 170 * * 6134 1000 0 R 58 3578 6883 * * * * 6502 * 4149 1663 6261 2258 4649 * 3474 4387 3747 6526 6554 5110 58 0 * * * * * * 6134 0 0 A 59 1035 * * * * 4621 * 5971 * 6279 * * 5569 * * 1466 4072 * * * 59 68 * 4434 * * * * 6115 0 0 C 60 * 45 * * * * * * * * * * * * * * * * * 5034 60 11 * 7068 * * 0 * 6042 0 1652 I 61 6462 * 5944 4931 6840 6156 6615 2655 4016 1829 4304 5127 * 4613 4718 2894 3883 4501 * * 61 46 * 5009 * * 0 * 6092 0 1000 I 62 5962 6593 * * * * 6450 3295 6354 3524 3473 * * 6644 6569 6265 1168 2708 * 4665 62 249 6271 2783 0 * 491 1794 6074 1000 2090 K 63 6184 * 6054 5564 4558 5185 5319 * 3231 2013 * 6704 1378 5618 4202 5436 6877 * * * 63 228 * 2773 * * 239 2709 6097 0 3657 M 64 3555 * * * 4276 * * 4088 * 1642 3717 * * * * 6219 4298 1541 * * 64 79 6356 4613 2585 263 787 1250 5931 1000 3807 S 65 1468 5464 5389 4563 3533 3423 5071 * 4261 6495 * 6203 5209 6569 6510 3382 3889 4584 6675 * 65 85 * 4135 * * 856 1160 5731 0 3681 R 66 2310 * 3346 3625 6824 6379 6582 4947 4263 4668 6465 4821 6973 3988 3347 3289 4471 4014 * 4692 66 108 6252 4079 0 * 616 1525 5686 1000 3471 V 67 3312 * 5170 6084 4247 6315 * 3959 5396 2611 4161 * * 2812 5507 6062 5170 1917 6383 * 67 171 * 3161 * * 1006 994 5832 0 3572 A 68 1353 3823 * 4550 4468 4446 3717 4535 4141 3527 * * * 6066 5133 6571 5383 4370 * 6032 68 169 6445 3333 1000 1000 0 * 5812 1000 4047 E 69 3757 * 1627 1837 * 5300 5183 * 4979 * * 3706 5233 4361 4919 5499 5033 * * * 69 166 * 3198 * * 0 * 5905 0 2902 N 70 6530 * 3897 4753 * 557 6154 * 3891 * 5852 4169 6136 * 5106 * * 6995 * * 70 102 4815 4925 779 1262 0 * 5857 1846 3494 A 71 2593 4831 4077 5757 * 4062 4794 5073 2527 5341 3723 5824 * 5905 3108 3673 4372 * 4823 6710 71 0 * * * * 1468 647 5875 0 2114 S 72 3558 * 3179 1983 * 5146 4609 6251 3223 * * 6797 6685 3682 3918 2972 4455 5237 * * 72 0 * * * * 0 * 5880 0 1576 V 73 * * * * * 6673 * 1269 * 4171 * * * * * * 3828 1154 * * 73 31 6525 6558 1585 585 * * 5904 1000 0 T 74 5775 * 5000 2831 6964 * * 3159 4889 4243 * 6261 * 6811 3369 6873 2029 2317 * 5038 74 58 * 4661 * * 0 * 5896 0 1000 T 75 * * * 6050 * * * * * * * * 4989 * * * 97 5769 * * 75 25 5848 * 1000 1000 0 * 5711 1000 2200 L 76 4842 * * * * * * 1596 * 2403 * * * * * 6185 6278 1256 * * 76 0 * * * * * * 5575 0 0 E 77 4637 * 4516 249 * * * * 6412 * * * 5725 5896 * 6102 6312 * * * 77 0 * * * * * * 5403 0 0 G 78 6114 * 5245 * * 640 5195 * * * * 5649 2426 * * 3569 * * * * 78 0 * * * * * * 5254 0 0 I 79 * * * * * * * 3066 * 293 5739 * * * * * 5927 5085 * * 79 0 * * * * * * 5203 0 0 G 80 * * * * * 0 * * * * * * * * * * * * * * 80 0 * * 0 * * * 4240 0 0 //