HHsearch 1.5 NAME d1bika2 FAM FILE d1bika2 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1bika2.a3m DATE Mon Mar 8 20:02:34 2010 LENG 56 match states, 56 columns in multiple alignment FILT 118 out of 720 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.0 EVD 0.4592 0.7537 SEQ >ss_dssp CGGGGSCCCCCSCCCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHCC >sa_dssp EECBEDEDCDCEDEEDDEBCACCEEEDEBCDBCBADCEDCDABBEDDCCADEECDE >ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCC >ss_conf 97000888512688861668874789817899977868888675328999985788 >Consensus ixxCxxpxxxGxcxxxxxrwyydxxxxxCxxFxyxGCxgNxNxFxtxxxCxxxCxv >d1bika2 VAACNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYCGV >UniRef50_Q9XWX5(682-736:1816) Protein Y43F8B.3a, partially confirmed by transcript evidence n=5 Tax=Caenorhabditis RepID=Q9XWX5_CAEEL E=2e-09 s/c=1.16 id=27% cov=100% -DPCTQTLAQGEGPLSVARFYFNAQSRTCDEFMFRGLKGNSNNFKSQEDCEKACPV >UniRef50_A8PU54(473-526:941) Kunitz/Bovine pancreatic trypsin inhibitor domain containing protein n=1 Tax=Brugia malayi RepID=A8PU54_BRUMA E=4e-12 s/c=1.34 id=27% cov=98% ITRCLEPLILGNCSKMYPSYYYNREAQRCEPFIYSGCDGNSNRFLTLRQCQITC-- >UniRef50_B7QI35(23-76:127) TFPI2 variant, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7QI35_IXOSC E=4e-09 s/c=1.15 id=25% cov=95% ---CKQDPDIGSGEANLFRWFYNHKTQSCKVFLHYGGRGTCNVFNTMQKCQDVCG- >UniRef50_B2C6G1(149-200:229) Dathoxin-3 n=1 Tax=Dermacentor andersoni RepID=B2C6G1_DERAN E=2e-06 s/c=1.03 id=30% cov=95% --VCSLPQSPGVCYFVLYRFFFDPKRNNCFLIRGRSCGKNDNAFVSHGDCMRRC-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * V 1 * * * * * * * 733 * 2925 * * * * * * * 1908 * * 1 0 * * * * * * 3973 0 0 A 2 1728 * 1580 5394 * 5075 * 5421 * * * 4397 * * * 2191 5608 * * * 2 0 * * * * * * 5102 0 0 A 3 3012 * 5199 4158 5059 * * * 6503 4967 * * 2719 4936 3020 * 3421 1651 * * 3 0 * * * * * * 5573 0 0 C 4 * 0 * * * * * * * * * * * * * * * * * * 4 0 * * * * * * 5965 0 0 N 5 4492 * 4576 4148 3793 6396 4467 4621 3752 2626 4904 4846 6145 5142 3307 2958 4181 6666 6957 4726 5 0 * * * * * * 5965 0 0 L 6 4941 * 4619 3315 6583 6781 6725 5744 4674 1534 4992 * 5399 2283 4691 5048 5302 6622 * 5094 6 27 6886 6610 0 * * * 5965 1000 0 P 7 3876 * 3676 3698 * * * 5938 4662 6652 5729 5341 885 5673 5151 4435 5351 7094 * * 7 0 * * * * * 0 6004 0 1000 I 8 3815 * * 5088 4688 * 5541 4081 3955 2971 4451 * 1913 4522 4389 5403 5550 3356 * 4541 8 26 5827 * 678 1415 0 * 6002 1641 1000 V 9 3761 * 2094 2732 5426 * 4833 4899 4429 5755 5689 3441 5709 4770 4842 3367 * 3617 * 7912 9 15 6606 * 1585 585 * * 6022 1000 0 R 10 4106 * * 2905 4893 5782 4951 4406 3814 4799 * 5565 3285 5329 3624 3136 2834 4310 * 4794 10 57 4680 * 1130 880 * * 6060 2563 0 G 11 * * * 4742 * 200 * * 6250 * * 6674 * 6645 5088 6028 * 6119 * * 11 105 3838 * 961 1041 * * 6063 3134 0 P 12 6553 * 3824 4828 * 6274 5330 4017 4433 5468 * 3863 1972 4944 4385 3047 3552 4374 * 4144 12 128 3713 6835 977 1023 * * 6076 3462 0 C 13 * 543 * 6308 * 2109 * * * * * 5816 * * * 5651 4990 * * * 13 36 5329 * 849 1169 0 * 6072 1594 1000 R 14 4959 * 3753 4443 4959 3146 * * 2841 6903 5876 3846 5410 3310 2502 3239 5572 * * 4632 14 0 * * * * * * 6085 0 0 A 15 2350 * 4464 3533 5767 2916 4959 * 3980 5205 5560 3661 4243 4056 6683 3708 4187 5787 * 5248 15 59 4632 * 1661 548 * * 6085 2586 0 F 16 4235 * 5521 4738 5144 4918 3792 5153 3439 4583 5364 3552 5384 4980 3740 3296 4766 4526 4253 3088 16 42 5137 * 1884 456 * * 6171 2004 0 I 17 5069 * 5343 3896 3238 7140 4734 3152 5452 2487 4799 6579 5421 4468 4491 4611 3947 2998 * 5401 17 37 5320 * 792 1243 * * 6171 1945 0 Q 18 5317 * 6420 3502 4428 5721 6658 3882 4340 3754 * 4140 3046 4950 3424 4093 3574 3157 6609 4641 18 39 5216 * 1892 453 * * 6171 1955 0 L 19 4827 5971 7255 5666 * 4961 5158 * 3784 4295 3644 5182 * 4871 1055 5206 6162 4621 5679 6102 19 41 5165 * 1448 659 * * 6171 2160 0 W 20 * * * * 2516 * * * * * * * * * * * * 6425 1131 1486 20 0 * * * * * * 6171 0 0 A 21 4179 * * * 2195 4125 3770 * * 6897 * 7085 * * 4632 7072 4461 5951 4919 1192 21 0 * * * * * * 6171 0 0 F 22 * 5971 * * 1528 * 4585 * * * 6090 * * * * * * * 5662 833 22 0 * * * * * * 6171 0 0 D 23 6417 * 1043 6768 * * 6130 5971 5168 * * 1534 * 6263 6716 3877 * * * * 23 0 * * * * * * 6171 0 0 A 24 2812 7034 * 5748 6779 5100 4577 5394 3518 5824 7078 5661 2394 3815 4181 2970 4045 4666 6732 4580 24 0 * * * * * * 6171 0 0 V 25 3430 * 3961 3146 * 4927 6711 4612 2913 7191 6110 4391 4482 3551 3908 3099 3347 4910 * * 25 0 * * * * * * 6171 0 0 K 26 3761 * 3751 4678 * * * 7040 3368 4463 * 4203 * 5623 3376 2401 1946 5902 * 5228 26 0 * * * * * * 6171 0 0 G 27 5251 * 5117 5308 * 2057 4763 * 2374 5695 4839 3142 * 4039 2978 3904 5767 * * 6779 27 0 * * * * * * 6171 0 0 K 28 4445 6630 6609 3592 5795 5449 * 5807 2989 5415 6821 3801 * 3034 2454 3188 2860 6656 * * 28 0 * * * * * * 6171 0 0 C 29 * 0 * * * * * * * * * * * * * * * * * * 29 0 * * * * * * 6171 0 0 V 30 6102 * 5952 2227 5108 * 5653 4955 2799 3681 4747 6039 * 3277 3358 4484 5206 2967 * * 30 0 * * * * * * 6171 0 0 L 31 5169 6474 * 3852 6425 7008 4670 5361 4542 3855 4433 5583 2847 2769 3608 3657 2914 4900 6656 7270 31 0 * * * * * * 6171 0 0 F 32 * * * * 319 6162 * 6396 * 5084 5327 5951 * * * 6474 * * * 3464 32 0 * * * * * * 6171 0 0 P 33 6598 * 5444 5330 4286 6871 6564 2999 4064 4504 4602 4206 5108 5173 4505 4883 3060 2813 3570 3922 33 0 * * * * * * 6171 0 0 Y 34 4852 * 6624 * 2375 5489 4286 6160 * * * * 6417 * * 4316 6672 * 3787 914 34 41 6873 5685 1585 585 * * 6175 1000 0 G 35 5862 * 4788 5738 5568 1444 7023 * 4579 5404 * 4823 * 5521 3222 2661 3275 * 6689 5031 35 0 * * * * 973 1027 6154 0 1644 G 36 * * 5650 4956 * 293 6869 5745 * * * 4906 * 6916 5551 4583 * * * * 36 14 * 6690 * * 0 * 6164 0 1000 C 37 6602 399 * 5154 5290 5763 * 6996 5388 5470 6134 * * 4620 5349 * 6860 * * 5867 37 20 6169 * 0 * * 0 6164 1552 1000 Q 38 7096 6917 3454 3258 * 1371 4593 * 3878 5214 6457 4192 6534 5211 3574 4321 6772 6602 * 6921 38 47 5796 6130 0 * 0 * 6164 1580 1000 G 39 3459 * 6593 6025 * 652 6061 6564 4292 * * 6675 5677 6634 4742 4288 5032 6389 * * 39 50 5883 5893 0 * 0 * 6165 1539 1000 N 40 5441 * 7061 * * 4576 7134 * * * * 469 * * 6723 4479 3417 6518 * 4665 40 26 5808 * 627 1504 0 * 6163 1627 1625 G 41 2594 6562 3879 3565 5451 2711 7231 * 3735 3881 * 4413 4739 4509 3434 3325 * 6532 6084 * 41 16 * 6532 * * * * 6176 0 0 N 42 * * * * * * * * * * * 34 * * 5420 * * * * * 42 0 * * * * 0 * 6170 0 1000 K 43 5277 * * * 4605 5448 4077 3722 4221 5351 * 1220 6532 5747 2333 5093 * 6562 * * 43 0 * * * * * * 6176 0 0 F 44 * * * * 102 * * * * * * * * * * * * * 6165 4201 44 0 * * * * * * 6176 0 0 Y 45 3917 6147 4265 2901 * 4641 5032 6978 3062 3435 5956 4064 3436 5045 3465 4427 6909 4332 * 4343 45 0 * * * * * * 6176 0 0 S 46 7233 * 4663 6935 6165 * * * 5396 5282 * 5312 * * 5403 1800 893 6994 * * 46 0 * * * * * * 6176 0 0 E 47 4590 * 6250 2994 5481 6567 4699 4470 2609 2789 5135 * * 4089 2942 4648 * 4814 * 3294 47 0 * * * * * * 6176 0 0 K 48 3645 * 3520 1624 6927 4862 5529 4812 4705 6703 6563 3886 6892 3108 4681 4370 5020 * 6790 5019 48 0 * * * * * * 6174 0 0 E 49 3081 * 2611 1573 * * 3840 * 4625 6239 5416 4634 * 3310 5542 5221 4450 * * * 49 0 * * * * * * 6174 0 0 C 50 * 27 * * * * * * * * * * * * 5742 * * * * * 50 0 * * * * * * 6174 0 0 R 51 6927 * 5451 1745 * * 6704 6986 3935 3768 3584 4241 * 2809 3139 5424 7002 4073 5901 6083 51 0 * * * * * * 6174 0 0 E 52 3358 6231 3499 2814 * 4883 6021 6191 3210 4430 * 4432 * 3848 2650 4104 4163 5739 5425 6629 52 0 * * * * * * 6176 0 0 Y 53 2502 * 6192 4743 3741 * 7027 4236 3899 3680 6584 6558 * 4773 3711 3669 2459 4535 * 4201 53 0 * * * * * * 6176 0 0 C 54 * 0 * * * * * * * * * * * * * * * * * * 54 0 * * * * * * 6176 0 0 G 55 6100 * * 5469 5781 1241 * * 5620 * 4649 * 2863 5700 5683 5924 4837 2097 * * 55 0 * * * * * * 5224 0 0 V 56 * * * * * * * 4640 * 2850 * * * * * * * 284 * * 56 0 * * 0 * * * 4201 0 0 //