HHsearch 1.5 NAME d1b8ta3 FAM FILE d1b8ta3 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1b8ta3.a3m DATE Tue Mar 9 04:42:36 2010 LENG 43 match states, 43 columns in multiple alignment FILT 102 out of 166 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.3 EVD 0.5170 4.2538 SEQ >ss_dssp CCCCCCCCCCCCCCCEECTTTSCEECSSSCEEETTEEECTTTC >sa_dssp EEEEEEEEEEEEEEDDDBDEEEEDBEDEDCCECEEEBCBEEDD >ss_pred CCCCHHHHHHHCCCCCCCCCCCCEEEHHHHHHHCCCEECCCCC >ss_conf 9777233233127888775578765064761118702022689 >Consensus TxxxxxkxxxkxxxxxxCxxCxkxVYxxEkxxaxgxxxHkxCF >d1b8ta3 TNPNASRMAQKVGGSDGCPRCGQAVYAAEKVIGAGKSWHKSCF >UniRef50_UPI000180B4DD(798-841:1074) PREDICTED: similar to microtubule associated monoxygenase, calponin and LIM domain containing 3 n=1 Tax=Ciona intestinalis RepID=UPI000180B4DD E=1e-05 s/c=1.16 id=32% cov=102% TRSNPKhNLTPKPSASDKCYFCDRRVYIVERLSAEGFFFHRQCF >UniRef50_UPI0000E49022(436-478:548) PREDICTED: similar to MGC84409 protein n=3 Tax=Strongylocentrotus purpuratus RepID=UPI0000E49022 E=6e-05 s/c=1.13 id=27% cov=102% TRSKSLKFGSATVISELCHVCQKRVYPMEKITADNIIYHNSCF >UniRef50_UPI0001758576(335-380:1023) PREDICTED: similar to LIM domain protein n=1 Tax=Tribolium castaneum RepID=UPI0001758576 E=4e-08 s/c=1.29 id=33% cov=100% -SSDSSKAQEKFNGAQIdpsnCRSCGKAVFQMEQIKAEKAVWHKNCF >UniRef50_Q4PDH9(404-442:501) Putative uncharacterized protein n=2 Tax=Basidiomycota RepID=Q4PDH9_USTMA E=2e-07 s/c=1.47 id=38% cov=91% ----SSSIVDASGGTPLCARCARPVYFAEQKAAAGRKWHRGC- >UniRef50_C1EB11(17-56:272) Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EB11_9CHLO E=4e-06 s/c=1.31 id=34% cov=95% -SPAPAKWTP--VAAPKCLVCEKSVYENEKLTADGKVWHKTCF >UniRef50_UPI000194E410(286-330:674) PREDICTED: similar to epithelial protein lost in neoplasm beta n=1 Tax=Taeniopygia guttata RepID=UPI000194E410 E=8e-06 s/c=1.14 id=25% cov=102% TEASPPKAVKKFqlPMKETCVGCQKTVYPMERLFANQQVFHISCF >UniRef50_Q3TB77(665-708:727) Putative uncharacterized protein (Fragment) n=7 Tax=Euteleostomi RepID=Q3TB77_MOUSE E=0.0002 s/c=1.06 id=33% cov=100% -SPNTPELSehQEAGAEELCELCGKHLYILERFCVDGHFFHRSCF >UniRef50_P29675(93-135:219) Pollen-specific protein SF3 n=35 Tax=Magnoliophyta RepID=SF3_HELAN E=0.0002 s/c=1.10 id=33% cov=100% -TQSANRLSSFFEGTrDKCNACAKIVYPIERVKVDGTAYHRACF >UniRef50_UPI000194D53B(119-164:435) PREDICTED: similar to RIKEN cDNA A930021H16 n=1 Tax=Taeniopygia guttata RepID=UPI000194D53B E=4e-05 s/c=1.07 id=30% cov=102% TSPVTTKRVLAESGnvpSSSCGVCGKHVHLVQRYLVDGKLYHRNCF # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * 3855 103 * * * 1 0 * * * * * * 3434 0 0 N 2 * * * 3318 * 3010 * * * * * 1920 * * 3420 1918 3596 3824 * * 2 0 * * * * * * 4108 0 0 P 3 3792 * * 4794 * 4644 * * 4857 * * * 1082 3375 * 2009 * * * * 3 54 * 4756 * * * * 4233 0 0 N 4 3371 * 3896 5205 * * * * 4855 3101 4897 1806 4736 * 3458 2815 4936 4830 * * 4 0 * * * * 0 * 4339 0 1000 A 5 3659 * * * * * * * * 5398 * * 1232 4722 * 2655 2617 3161 * * 5 0 * * * * * * 4539 0 0 S 6 3156 * 5221 5341 * * * * 2963 5240 * 2736 2824 5167 * 1695 4224 * * * 6 42 5132 * 0 * * * 4612 1000 0 R 7 5144 * * 3637 * * * * 943 5015 * 5524 * 4460 3410 2840 4665 * * * 7 0 * * * * * * 4454 0 0 M 8 3168 5172 5515 * 1983 4475 * 3007 * 3057 4266 * 4702 * 5232 * 4070 4435 5482 4280 8 0 * * * * * * 4415 0 0 A 9 3822 * * * * 4481 * 4731 5567 * 5182 5677 3332 3534 * 1675 2483 3306 * * 9 47 4974 * 1000 1000 * * 4413 1000 0 Q 10 2957 * 5667 3439 * 4779 * 5585 3439 3435 * 5634 3020 2365 5729 3084 4535 * * * 10 31 * 5540 * * * * 4604 0 0 K 11 3006 * * 5224 4355 5700 * 4539 1173 5334 4249 4302 4945 5762 4375 4291 * * * 5975 11 18 * 6338 * * * 0 4468 0 1000 V 12 2356 * * 5361 1800 6047 * 5110 * 4424 * * 3760 4571 * 4288 4638 4559 3142 4656 12 31 5535 * 1000 1000 965 1036 4375 1000 1450 G 13 3885 5728 * 5445 4548 1091 * * * 3972 * 4698 3687 5125 5926 4092 * 3403 * * 13 43 * 5099 * * * 0 4355 0 1000 G 14 3756 * 4614 2627 * 1087 * 6067 * * 5805 5808 4946 * * 4885 4560 3422 * * 14 110 3762 * 1200 824 1355 716 4352 1998 1776 S 15 2344 * * 5705 * 2763 * * 4852 * * 5303 5225 4959 * 1759 2331 5413 * * 15 158 3269 * 869 1144 0 * 4328 2736 1268 D 16 4745 * 2394 1824 * 5728 * * 4936 5917 * 4106 3035 2975 * 3424 5535 * * * 16 43 5086 * 0 * * * 4346 1425 0 G 17 6108 * * * 6288 3002 * 4315 1167 3576 6818 * 5510 5506 4255 4711 3551 5035 * 6760 17 26 5794 * 1516 621 * * 4413 1526 0 C 18 * 0 * * * * * * * * * * * * * * * * * * 18 0 * * * * * * 4339 0 0 P 19 3556 * 7049 4682 4128 3786 4311 4864 4624 5871 * 6163 2031 6400 3921 3060 4801 3840 * 4863 19 0 * * * * * * 4339 0 0 R 20 2982 5855 5373 * 4247 5256 * 4902 3844 4214 * * * * 1621 3138 6317 2920 * 6282 20 0 * * * * * * 4339 0 0 C 21 * 0 * * * * * * * * * * * * * * * * * * 21 0 * * * * * * 4339 0 0 G 22 4426 * 4052 3446 * 1101 * * 4702 6730 * 3754 * 3012 6558 4062 5729 * * * 22 0 * * * * * * 4339 0 0 Q 23 6279 * 4443 5597 5594 3835 * 6346 624 * * * * 3816 4247 6301 6811 * * 5416 23 0 * * * * * * 4339 0 0 A 24 3489 * * 6853 * 6209 3882 5445 5523 6095 5547 6637 4063 * 2506 2888 1947 4106 * 4580 24 0 * * * * * * 4339 0 0 V 25 4254 * * * * * * 5373 * 4356 * * * * * * * 193 * * 25 0 * * * * * * 4339 0 0 Y 26 * * * * 3688 * 4180 * * * * * * * * * * * * 205 26 0 * * * * * * 4339 0 0 A 27 2354 * 6330 5855 3554 * 4813 4123 * 2900 6426 * 1592 5000 * 4900 6298 5063 * 6400 27 0 * * * * * * 4339 0 0 A 28 1174 * * * * * * 6163 * 2808 2422 5774 * 5821 * * 5731 2655 * * 28 0 * * * * * * 4339 0 0 E 29 * * 4081 166 * * * * * * * * * 4325 * * * * * * 29 0 * * * * * * 4339 0 0 K 30 5423 5916 * 3767 * 5821 * * 1548 5566 * * * 2578 1638 5855 * * * * 30 0 * * * * * * 4339 0 0 V 31 6330 * * * 5128 * 4941 2426 3952 1823 3799 6298 * 5303 5397 * 5767 2245 * 5052 31 0 * * * * * * 4339 0 0 I 32 4815 5734 5130 4243 4710 * * 2641 4035 2959 5300 4235 * 4408 4864 3042 3614 3288 * 6529 32 0 * * * * * * 4339 0 0 G 33 1093 4228 * * * 2901 * 5559 * 5845 6493 * * * * 3163 4789 2770 * * 33 0 * * * * * * 4339 0 0 A 34 2957 * 1877 2721 * 3745 6301 4843 4378 3372 6357 4119 7046 * 5703 4513 * 4638 * * 34 9 7293 * 0 * * * 4339 1000 0 G 35 * * 4034 4506 * 529 * * 3379 * * 4295 * 4503 6543 * * * * * 35 0 * * * * * * 4339 0 0 K 36 4725 6841 * 5824 4345 5682 3712 5646 1885 3730 6958 5768 * 3687 2451 5301 4446 4688 * 5171 36 0 * * * * * * 4339 0 0 S 37 4162 5668 4515 5751 3373 6346 * 3080 4184 3531 5663 4552 4099 * * 3486 4201 2385 * 4726 37 79 4224 * 0 * * * 4339 1306 0 W 38 * * * * 1996 * * * * 5361 5801 * * * * * * * 1334 1688 38 0 * * * * * * 4339 0 0 H 39 * * * * * * 68 * 4443 * * * * * * * * * * * 39 16 6532 * 0 * * * 4339 1000 0 K 40 * * * * * 6532 6284 5575 779 * * 4244 5542 * 1842 5680 * * * * 40 14 6696 * 0 * * * 4339 1000 0 S 41 3488 * * 4533 5359 3288 5622 6940 4591 5488 * 3051 4780 6799 5084 1774 2856 5464 * * 41 0 * * * * * * 4335 0 0 C 42 * 68 * * * * * * * * * * 4442 * * * * * * * 42 0 * * * * * * 4335 0 0 F 43 * * * * 40 * * * * * * * * * * * * * * 5195 43 0 * * 0 * * * 4038 0 0 //