HHsearch 1.5 NAME d1aapa_ FAM FILE d1aapa_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1aapa_.a3m DATE Mon Mar 8 19:58:16 2010 LENG 56 match states, 56 columns in multiple alignment FILT 101 out of 723 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.2 EVD 0.4474 0.2646 SEQ >ss_dssp CGGGGGSCCCCCSSSCCEEEEEEETTTTEEEEEEECSSSCCSCCBSSHHHHHHHHC >sa_dssp EEECAEDECDDDEDEDEDECCCBCEEEDDBCEBDBADCEDCEACBEDDEDADECBE >ss_pred CCCHHCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHCC >ss_conf 98230089864379886166887478983789996785888878420899997339 >Consensus ixxxCxxpxxxGxCxxxxxxxxydxxxxxCxxFxyxGCxgNxNxFxtxxxCxxxCg >d1aapa_ VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG >UniRef50_Q20008(158-213:220) Protein F35B12.4, partially confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q20008_CAEEL E=0.0008 s/c=0.80 id=28% cov=96% ---LCNLTYDSGKfavGGEKSDKYFWVPKYTTCMRFSFYGTLGNANNFPNYNSCMATCG >UniRef50_B3MP46(24-76:110) GF14658 n=1 Tax=Drosophila ananassae RepID=B3MP46_DROAN E=6e-05 s/c=0.92 id=21% cov=95% ---ICRLEPIPiGQCGDSFVGYTYSTIRNRCVNFAGRGCSITGNFFNSRNECEDLC- >UniRef50_C4QBC7(402-458:460) Serine-type protease inhibitor, putative n=1 Tax=Schistosoma mansoni RepID=C4QBC7_SCHMA E=2e-11 s/c=1.24 id=30% cov=100% VPSECKQPPDAGSCqiKNPSQNFFYDIESNDCTSFYFHECGGNDNRFVTKSECMSHC- >UniRef50_O17644(348-402:1043) Protein C34F6.1, confirmed by transcript evidence n=4 Tax=Caenorhabditis RepID=O17644_CAEEL E=3e-09 s/c=1.15 id=29% cov=100% LTDPCLLSINVGQGKALLKRFYYNTFSKRCTEFMYKGTKGNENNFLSYTQCQEKC- >UniRef50_B4JW58(662-718:888) GH22804 n=4 Tax=Drosophila RepID=B4JW58_DROGR E=3e-06 s/c=0.92 id=30% cov=100% VPHFCFESPRESHCRDSdvTNYWYYDHPSDQCAIYWSDRCDTNLNKFKSKEECDETC- >UniRef50_Q8MVK3(18-71:74) Kunitz serine protease inhibitor-like protein (Fragment) n=1 Tax=Boltenia villosa RepID=Q8MVK3_9ASCI E=2e-05 s/c=0.93 id=29% cov=98% INPICLKMPPKDDCRMLYPHYYFNSYNGVCEYTIFGGCYK-GNNFPTLYDCEMTC- >UniRef50_Q22685(312-365:1074) Putative uncharacterized protein n=5 Tax=Caenorhabditis RepID=Q22685_CAEEL E=0.0005 s/c=0.85 id=31% cov=93% ---VCIQPLESGD-EPSVPRWWYNSATGTCVQFMWdpdTITNASPNNFRTAEHCESYC- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * V 1 * * * * * * * 1643 * 1915 * * * * * * * 1270 * * 1 0 * * * * * * 5318 0 0 R 2 5437 * * * * 6155 4498 * 2342 5645 * 5429 1481 2687 3060 6421 6195 * 5682 * 2 0 * * * * * * 5808 0 0 E 3 4200 * 1694 1913 * 5974 5262 * 3673 * * 4196 4834 4880 6218 3527 6081 6376 * * 3 0 * * * * * * 5897 0 0 V 4 5455 * * 5156 3725 * * 2221 * 3438 4917 * 3086 6350 2306 6463 6671 2712 * 5174 4 0 * * * * * * 6103 0 0 C 5 * 0 * * * * * * * * * * * * * * * * * * 5 0 * * * * * * 6191 0 0 S 6 4696 * 4532 4167 3619 6512 6295 4712 3677 2575 5097 4732 5992 4973 3096 2925 4480 5423 * 4570 6 0 * * * * * * 6191 0 0 E 7 4767 * 4466 3339 5146 * 5531 5775 3677 1542 4305 5927 5996 2480 * 4725 6059 * * 6094 7 17 * 6406 * * * * 6198 0 0 Q 8 4016 * 3776 3495 6620 6455 6922 5320 3119 * 5309 6920 1026 6945 * 4597 6094 6937 * 6698 8 0 * * * * * 0 6201 0 1000 A 9 4108 * * 4107 5091 * 6209 4944 3985 3036 3988 * 1509 5554 5300 5537 6216 3812 * 4151 9 49 4898 * 1875 459 0 * 6201 2112 1000 E 10 3396 * 1689 3211 6306 * 5623 6322 5733 6476 5808 3095 4599 5202 4682 3552 6445 3882 * 7805 10 25 5838 * 954 1047 * * 6215 1607 0 T 11 4287 * 6476 2759 4742 4982 5210 3883 3959 5209 6759 4815 3146 5807 3667 4414 2622 5269 6733 4809 11 78 4251 * 937 1066 * * 6247 2914 0 G 12 6565 * 4309 4539 * 341 * * 6322 6298 * 6912 * 6503 5923 5470 6862 6104 * * 12 75 4300 * 1023 977 * * 6247 2611 0 P 13 6565 * 4258 4477 * 6040 4989 5107 3488 4328 * 3630 2224 5466 3850 2947 4089 4114 * 4486 13 137 3673 6345 786 1251 * * 6247 3500 0 C 14 * 464 * * * 2295 * * * * * * * * 6016 5208 5110 * * * 14 37 5316 * 1687 536 0 * 6226 1935 1000 R 15 6610 * 4475 * 5178 3187 4802 * 3333 5217 6448 3516 6884 3481 2265 3296 4099 * 6027 3945 15 15 6562 * 2000 415 * * 6254 1000 0 A 16 2264 * 4002 3200 5001 2796 5814 * 4542 5667 5187 3784 3579 4071 * 4723 4212 5670 * 6586 16 14 6690 * 1000 1000 * * 6254 1000 0 M 17 5803 6027 4925 4252 5006 4418 4508 5165 4068 4013 4780 2847 4763 3894 4582 3632 5611 4424 5218 3129 17 46 4984 * 1601 577 * * 6254 1946 0 I 18 5686 * 4549 4467 3538 6974 4656 3112 4473 2953 4326 5245 5723 3895 5725 3081 3873 3596 * 5750 18 0 * * * * * * 6254 0 0 S 19 * * 5117 3726 4500 5523 5385 3888 3874 4144 6331 4436 2950 4387 3339 4445 3440 3598 6738 4355 19 58 4669 * 1656 551 * * 6257 2394 0 R 20 4499 5931 * 5586 6151 3758 6256 6437 3079 5324 3615 4375 * 4514 1402 4871 6131 5091 6738 5410 20 57 4699 * 1000 1000 * * 6257 2278 0 W 21 * * * * 2755 * * * * 6252 * * * * * * * * 1212 1297 21 0 * * * * * * 6257 0 0 Y 22 4014 * * * 1913 4844 4626 * * * * * * * 4145 * 3804 5727 4343 1318 22 0 * * * * * * 6257 0 0 F 23 * 5931 * * 1410 * 5509 * * * * * * * * * * * 4981 853 23 0 * * * * * * 6257 0 0 D 24 6494 * 1172 6504 * * 5036 5931 5483 * * 1397 * * 6688 4642 * 6163 * 5555 24 0 * * * * * * 6257 0 0 V 25 3330 7001 * 6342 5613 5258 4587 4876 3389 5208 5427 6957 2336 3544 4262 2960 4839 4461 6451 4376 25 0 * * * * * * 6257 0 0 T 26 3925 * 3559 2893 * 6072 5492 4605 2909 * 6092 4245 5716 3542 3737 3163 3457 4629 * 6256 26 8 7456 * 3585 126 * * 6257 1000 0 E 27 4347 * 4602 4273 * 6153 * 4908 2864 4476 5809 4461 * 5034 3135 2500 2351 5846 * 5031 27 0 * * * * * * 6257 0 0 G 28 6108 * 3754 4227 * 2250 4389 * 2797 6242 4222 2497 * 4252 3748 4054 5313 * * * 28 0 * * * * * * 6257 0 0 K 29 4170 * 4892 3411 * 4586 * 5411 3632 4622 5480 4383 * 3437 2374 2913 3241 4792 * * 29 0 * * * * * * 6257 0 0 C 30 * 0 * * * * * * * * * * * * * * * * * * 30 0 * * * * * * 6257 0 0 A 31 5070 * 5830 1969 4629 6766 6688 5276 3106 3658 4555 * * 3301 4193 4848 4715 2783 * * 31 0 * * * * * * 6257 0 0 P 32 5800 6342 * 3662 5844 5844 5992 4858 4197 3795 4536 5049 3010 2876 3307 3995 3179 4813 6107 5556 32 0 * * * * * * 6257 0 0 F 33 * * * * 445 6131 * 6287 * 4698 5583 5727 * * * 6342 6256 * * 2891 33 0 * * * * * * 6257 0 0 F 34 6368 * 4593 5954 4330 6518 6593 3042 4876 4657 4712 4732 5005 5204 4959 4008 2877 2920 3338 3862 34 0 * * * * * * 6257 0 0 Y 35 4563 * 6434 * 2069 5319 4751 6128 * * * * 6069 * * 4281 6319 * 4410 984 35 34 6389 6500 2322 322 * * 6262 1000 0 G 36 5692 6022 4351 5556 6901 1210 6929 * 4222 4825 * 6968 * 6867 3543 2620 4296 6557 * 5021 36 0 * * * * * 0 6250 0 1000 G 37 5597 * 6559 4859 * 476 6771 5533 * 6143 * 4358 * 6482 4922 3950 * 6318 * * 37 17 * 6434 * * 0 * 6250 0 1000 C 38 5496 368 * 4909 6735 5165 * 6766 6695 5361 * * * 4793 5878 6583 6155 * * 6442 38 14 6719 * 0 * * 0 6249 1000 1000 G 39 4326 * 3289 4349 * 1384 4811 * 4446 5132 5759 4024 6448 4652 3641 4543 6850 6545 6518 5560 39 50 6672 5349 0 * 0 * 6249 1000 1000 G 40 3445 * * 5695 * 648 6345 6311 3735 * * 6554 6757 6252 5580 4214 4979 6469 * * 40 81 5235 5156 0 * 0 * 6239 1668 1580 N 41 5721 * 6906 * * 4563 7100 * 5129 * * 456 * * * 3894 3789 * * 5268 41 16 6527 * 1000 1000 0 * 6239 1000 1660 R 42 2925 * 3842 3146 6449 2688 * * 3293 4090 * 5041 4474 4514 3292 3289 5565 6187 * * 42 30 5605 * 1351 718 * * 6264 1350 0 N 43 * * * * * 6089 * * * * * 67 * * 5871 * * 6187 * * 43 0 * * * * * * 6264 0 0 N 44 6274 * * * 4570 5871 3882 3663 4260 5325 6134 1604 6187 4818 1849 4884 * * * * 44 0 * * * * * * 6264 0 0 F 45 * * * * 107 * * * * * * * * * * * * * 6122 4137 45 0 * * * * * * 6264 0 0 D 46 4824 6051 3255 3034 6503 4927 5778 5834 3387 3670 5771 4631 3297 4881 3253 4381 6799 3995 * 4321 46 0 * * * * * * 6264 0 0 T 47 6523 * 4371 6666 6122 * * * 5956 5465 * 4158 * * 6464 1647 1025 * * * 47 0 * * * * * * 6264 0 0 E 48 4987 * 5450 2744 5735 * 5467 5883 2083 2433 5869 6024 * 4251 3068 5517 * 5653 * 3819 48 0 * * * * * * 6264 0 0 E 49 3096 * 4553 1657 * 5249 5506 4905 3851 * 6803 3859 6498 3732 3830 3872 5374 6683 * 4806 49 0 * * * * * * 6262 0 0 Y 50 3119 * 2814 1527 * * 4952 6553 4565 6315 5080 5208 * 3584 5987 3751 4337 6569 * 6995 50 0 * * * * * * 6262 0 0 C 51 * 42 * * * * * * * * * * * * 6130 6146 * * * * 51 0 * * * * * * 6262 0 0 M 52 6495 * 6462 1819 * * 4341 6057 4488 3818 3181 4114 * 2736 3715 4483 6915 4793 5568 6665 52 0 * * * * * * 6262 0 0 A 53 3199 6310 4172 2937 * 4962 5583 7047 3031 4126 5055 5834 * 3429 2487 4421 4738 6128 5891 5778 53 0 * * * * * * 6262 0 0 V 54 2540 * 6855 4758 3880 * 5935 3745 4209 3793 6427 5065 * 4657 3573 4494 2493 4003 * 4382 54 0 * * * * * * 6262 0 0 C 55 * 0 * * * * * * * * * * * * * * * * * * 55 0 * * * * * * 6260 0 0 G 56 * * * * * 0 * * * * * * * * * * * * * * 56 0 * * 0 * * * 4305 0 0 //