HHsearch 1.5 NAME c8oieB_ FAM FILE c8oieB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c8oieB_.a3m DATE Sat Oct 7 08:29:30 2023 LENG 111 match states, 111 columns in multiple alignment FILT 10 out of 14 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.6 EVD 0.3619 -2.1955 SEQ >ss_dssp CTTHHHHHHHHHHHCCTTCCSSHHHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHCGGGTTSCHHHHHHHHHHHHHHHHHHHTTS CCCGGGGCSCC >sa_dssp EEDCECABECADEECEBADDEBBDCBDDBADCAADBACDCBCEDEBEDEDEECDDBCDCACEABEBADEDBECADECDEEDBEDBBECACECACDDACED CEDEDBECEEE >ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHCC CCCCHHCCCCC >ss_conf 9127899999999765898622202787776599999999749888877877888999899999999985802773898999999999998678875100 10003205589 >Consensus xeridxLxxyIxkxcLWQFxSRsWDRexqxxgIlxxtxxilxGexvxxxTpxDkxyyxDaxxlaxxxkxrxpWxxxmxkxeixxLixxLkxRlxxltitx SlNxELxxxxY >c8oieB_ SEKLDPLVDYIMKNCLWQFNSRGWDRLKQNAGILSQTCEILCGEEPVHETAMDRCYWVDAVILSRAYKARFPWLMAMTKPEIKSLFKALHEKIDHLTVHG SLNTELTVPHY >UniRef50_O68940(7-116:116) Nitrogenase iron-iron protein delta chain n=7 Tax=cellular organisms RepID=ANFG_RHORU E=7e-34 s/c=1.31 id=59% cov=100% -DRIDLLIDYIMKHCLWQFHSRSWDRKRQNEGILTKTTQLLCDEPVDLGTPADKCYWVDAVCLADAYKSRYPWLKTMDKDDIKALMGALHERLDHLTITG SLNLELTDQHY >UniRef50_Q46A90(2-112:112) Nitrogenase, subunit delta n=3 Tax=Methanosarcina RepID=Q46A90_METBF E=5e-14 s/c=0.71 id=33% cov=100% -EKIEEVTALIQKQCLWQFFSRSWDREENIEGIMTMTSKILNGEKINLVTPADKAFYSDAKFLAAEIQKKMTWISELDKSEVLELIEGVKERLLYIAVKK SRNCELNLSNY >UniRef50_Q46083(24-132:132) Nitrogenase iron-iron protein delta chain n=25 Tax=Bacteria RepID=ANFG_CLOHU E=2e-41 s/c=1.55 id=53% cov=99% --RIDELTDYIMKTLLWQFHSRSWDRERQNAEILKKTKELLCGEPVDLSTSHDRCYWVDAVCLADDYREHYPWINSMSKEEIGSLMQGLKDRMDYLTIHR LLNEELSDKHY >UniRef50_B3Q673(38-146:146) Fe-only nitrogenase, delta subunit n=3 Tax=Rhodopseudomonas palustris RepID=B3Q673_RHOPT E=3e-41 s/c=1.55 id=57% cov=99% --RVDQMVDWIMKNCLWQFHSRAWDRKRQNEGILGIAAKLLAGEPFTPETPEDRCYWVDSVTLQRAYQATCPWLATMSKDDIKALMQELHARVDYLTVTG SLNEELTDLHY >UniRef50_Q46244(8-116:116) Nitrogenase iron-iron protein delta chain n=4 Tax=Bacteria RepID=ANFG_CLOPA E=4e-41 s/c=1.55 id=54% cov=99% --QLNQLTDYIMKNCLWQFHSRKWDRERQNEGILTKTKQILLGEEVDLSTPADRCYYADALCLADAYKTEYPWINDMSKDELIQLMQQLKDRIDYVTITG SLNAELTDPRY >UniRef50_Q20XD2(34-142:142) Nitrogenase n=6 Tax=Bacteria RepID=Q20XD2_RHOPB E=1e-39 s/c=1.50 id=58% cov=99% --KVSELENYIMKNCLWQFNSRGWDRRKQSAGVLGKTAQILVGEEVDNPTPLDKCYWVDAVLLARNFTERCAWLSDMGKDEIRALIAKLHARIDWLTIDG SLNEELTVQNY >UniRef50_Q6NA07(3-113:113) Vanadium dinitrogenase delta subunit n=1 Tax=Rhodopseudomonas palustris RepID=Q6NA07_RHOPA E=6e-38 s/c=1.42 id=31% cov=101% AEQIDQLYNYCQERYLWQFFSRTWDRQENIDNIVATATSLFNGEVVKRETPMEKLFYSDAIVMVSDFKERFPWILDCSPDQIRELMAGLKDRLTEIAITR SLNGELNHSLY >UniRef50_O68951(5-113:113) Nitrogenase vanadium-iron protein delta chain n=35 Tax=Bacteria RepID=VNFG_AZOSA E=4e-37 s/c=1.42 id=37% cov=99% --RLDDLFAYVEERCLWQFFSRTWDREENIEGVLNQVCRLLTGQEPLRGTPQERLFYADALAMANDVRERFPWASQVNKEEIAFLIDGLKSRLVDVTITR STNRELNHHLY >UniRef50_A5N907(3-112:112) VnfG n=2 Tax=Clostridium kluyveri RepID=A5N907_CLOK5 E=7e-34 s/c=1.31 id=35% cov=100% -NRVEELFSFIQERYLWQFYSRSWDREENIKGILDATFEICTGKQVKDKTLMDKYFYTEGKAFSEVIKKKFPWFLELDESEKKSVINDLQTKLLDVVVTR SLNAELKNPNY # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 1000 * * * * * * * * * * * * * * 1000 * * * * 1 0 * * * * * * 1607 0 0 E 2 * * 2441 726 * * * * * * * 2242 * * * * * * * * 2 0 * * * * * * 2308 0 0 K 3 * * * * * * * * 1736 * * * * 2359 986 * * * * * 3 0 * * * * * * 2657 0 0 L 4 * * * * * * * 1332 * 1827 * * * * * * * 1639 * * 4 0 * * * * * * 2657 0 0 D 5 * * 799 1987 * * * * * * * 3654 * * * 3420 * * * * 5 0 * * * * * * 2657 0 0 P 6 * * 3140 1207 * * * * * 3706 * * 3489 1797 * * * * * * 6 0 * * * * * * 2657 0 0 L 7 * * * * * * * * * 341 3427 * * * * * * 3086 * * 7 0 * * * * * * 2657 0 0 V 8 * * * 3420 2011 * * 3706 * * * * * * * * 1814 2458 * 3114 8 0 * * * * * * 2657 0 0 D 9 2113 * 1233 * * * * * * * * 2259 * * * 2893 * * * * 9 0 * * * * * * 2657 0 0 Y 10 * * * * 2893 * * * * 3086 * * * * * * * * 3427 611 10 0 * * * * * * 2657 0 0 I 11 * 3114 * * * * * 375 * * * * * * * * * 3140 * * 11 0 * * * * * * 2657 0 0 M 12 * * * 3140 * * * * * * 947 * * 1443 * * * * * * 12 0 * * * * * * 2657 0 0 K 13 * * * 1460 * * * * 652 * * * * * * * * * * * 13 0 * * * * * * 2657 0 0 N 14 * * * * * * 3706 * * * * 1495 * 3086 1460 * 3518 * * * 14 0 * * * * * * 2657 0 0 C 15 * 594 * * * * * * * 3518 * * * * * * * * * 2000 15 0 * * * * * * 2657 0 0 L 16 * * * * * * * * * 0 * * * * * * * * * * 16 0 * * * * * * 2657 0 0 W 17 * * * * * * * * * * * * * * * * * * 0 * 17 0 * * * * * * 2657 0 0 Q 18 * * * * * * * * * * * * * 0 * * * * * * 18 0 * * * * * * 2657 0 0 F 19 * * * * 0 * * * * * * * * * * * * * * * 19 0 * * * * * * 2657 0 0 N 20 * * * * 1528 * 1572 * * * * 2454 * * * * * * * 2893 20 0 * * * * * * 2657 0 0 S 21 * * * * * * * * * * * * * * * 0 * * * * 21 0 * * * * * * 2657 0 0 R 22 * * * * * * * * * * * * * * 0 * * * * * 22 0 * * * * * * 2657 0 0 G 23 3427 * * * * 2454 * * 3654 * * * * * * 1265 2127 * * * 23 0 * * * * * * 2657 0 0 W 24 * * * * * * * * * * * * * * * * * * 0 * 24 0 * * * * * * 2657 0 0 D 25 * * 0 * * * * * * * * * * * * * * * * * 25 0 * * * * * * 2657 0 0 R 26 * * * * * * * * * * * * * * 0 * * * * * 26 0 * * * * * * 2657 0 0 L 27 * * * 909 * * * * 2560 3489 * * * 3114 3420 * * * * * 27 0 * * * * * * 2657 0 0 K 28 * * * 1055 * * * * 2454 * * * * * 1572 * * * * * 28 0 * * * * * * 2657 0 0 Q 29 * * * * * * * * * * * 1055 * 947 * * * * * * 29 0 * * * * * * 2657 0 0 N 30 * * * * * * * 1055 * * * 1233 * * * 3420 * * * * 30 0 * * * * * * 2657 0 0 A 31 1890 * 3114 1058 * * * * 2893 * * * * * * * * * * * 31 0 * * * * * * 2657 0 0 G 32 * * * 3518 * 327 * * * * * 3114 * * * * * * * * 32 0 * * * * * * 2657 0 0 I 33 * * * * * * * 334 * * * * * * * * * 2273 * * 33 0 * * * * * * 2657 0 0 L 34 * * * * * * * * * 383 3086 * * * * * * 3114 * * 34 0 * * * * * * 2657 0 0 S 35 3114 * 2893 * * 2424 * * 3518 * * 3140 * * * 3489 1869 * * * 35 0 * * * * * * 2657 0 0 Q 36 2893 * * * * * * 3427 1570 * 3086 * * 2304 * * 3114 * * * 36 0 * * * * * * 2657 0 0 T 37 2262 * * * * * * * * * * * * * * * 560 3140 * * 37 0 * * * * * * 2657 0 0 C 38 2424 2304 * * 2893 * * * 2585 * * * * * * 3086 2380 * * * 38 0 * * * * * * 2657 0 0 E 39 * * * 1685 * * * * 2247 * * * * 2003 3140 3114 * * * * 39 0 * * * * * * 2657 0 0 I 40 * * * * * * * 960 * 1042 * * * * * * * * * * 40 0 * * * * * * 2657 0 0 L 41 * 2893 * * 3114 * * * * 415 * * * * * * * * * * 41 0 * * * * * * 2657 0 0 C 42 3427 1983 * * * * * * * 3654 * 2100 * * * * 2011 3420 * * 42 0 * * * * * * 2657 0 0 G 43 * * 3706 * * 115 * * * * * * * * * * * * * * 43 0 * * * * * * 2657 0 0 E 44 * * * 411 * * * * 2893 * * * * 3140 * * * * * * 44 0 * * * * * * 2657 0 0 E 45 * * * 1414 * * * * 3086 * * * 1961 2893 * * * 3114 * * 45 0 * * * * * * 2657 0 0 P 46 * * * * 3427 * * 3086 * * * * 2304 * * * * 769 * * 46 0 * * * * * * 2657 0 0 V 47 * * 1570 * * * * * 2000 3140 * 3086 * * * * 3427 3489 * * 47 0 * * * * * * 2657 0 0 H 48 * * 2893 * * * 3489 * * 1470 * 3420 3427 * 2127 * * * * * 48 0 * * * * * * 2657 0 0 E 49 * * * 1749 * 2395 * * 2893 * * * 3420 * * 2585 * 3086 * * 49 0 * * * * * * 2657 0 0 T 50 * * * * * * * * * * * * * * * * 0 * * * 50 0 * * * * * * 2657 0 0 A 51 3489 * * * * * * * * 2893 * * 537 * * 3518 * * * * 51 0 * * * * * * 2657 0 0 M 52 1869 * * 3427 * * 3518 * * 3420 1560 * * 3140 * * * * * * 52 0 * * * * * * 2657 0 0 D 53 * * 375 2127 * * * * * * * * * * * * * * * * 53 0 * * * * * * 2657 0 0 R 54 * * * * * * * * 895 * * * * * 1114 * * * * * 54 0 * * * * * * 2657 0 0 C 55 3086 947 * * * * * * * 2127 * * * * * * * * * 2893 55 0 * * * * * * 2657 0 0 Y 56 * * * * 1055 * * * * * * * * * * * * * * 947 56 0 * * * * * * 2657 0 0 W 57 * * * * * * * * * * * * * * * * * * 1187 835 57 0 * * * * * * 2657 0 0 V 58 2374 * * * * * * * * * * * * * * 2100 2893 1187 * * 58 0 * * * * * * 2657 0 0 D 59 * * 209 2893 * * * * * * * * * * * * * * * * 59 0 * * * * * * 2657 0 0 A 60 373 * * * * 2893 * * * * * * * * * 3427 * * * * 60 0 * * * * * * 2657 0 0 V 61 * * * * * * * 3114 1987 2374 * * * * * * * 1187 * * 61 0 * * * * * * 2657 0 0 I 62 2011 2039 * * 3086 * * 3489 * 3420 * * * * * * 3427 3114 * * 62 0 * * * * * * 2657 0 0 L 63 * * * * 2893 * * * * 652 2127 * * * * * * * * * 63 0 * * * * * * 2657 0 0 S 64 816 * * * * * * * * * * * * 3427 * 2161 * 3114 * * 64 0 * * * * * * 2657 0 0 R 65 3086 * 2039 2893 * * * * * * * 3140 * * 1860 3114 * * * * 65 0 * * * * * * 2657 0 0 A 66 1565 * 1661 3086 * * * * * * * 3420 * * * * * 2893 * * 66 0 * * * * * * 2657 0 0 Y 67 * * * * 2259 * * 1987 * * * * * * * * * 3140 * 1233 67 0 * * * * * * 2657 0 0 K 68 * * * * * * * * 1014 * * * * 2247 2317 * 3420 * * * 68 0 * * * * * * 2657 0 0 A 69 2458 * * 1288 * * * * 1987 * * * * * * 3706 3654 * * * 69 0 * * * * * * 2657 0 0 R 70 * * * 3654 * * 3518 * 1987 * * * * * 1035 * 3427 * * * 70 0 * * * * * * 2657 0 0 F 71 * 2424 * * 1144 * * * * * 3086 * * * * * * * * 2039 71 0 * * * * * * 2657 0 0 P 72 3420 * * * * * * * * * * * 342 * * * 3086 * * * 72 0 * * * * * * 2657 0 0 W 73 * * * * * * * * * * * * * * * * * * 0 * 73 0 * * * * * * 2657 0 0 L 74 3140 * * * 2893 * * 1322 * 1506 * * * * * * * * * * 74 0 * * * * * * 2657 0 0 M 75 3427 * * * * * * * 3706 2000 3489 2585 * * * 1623 * * * * 75 0 * * * * * * 2657 0 0 A 76 3489 * 1794 1987 * * * * * * * * * 3140 * 3518 2560 * * * 76 0 * * * * * * 2657 0 0 M 77 * 3114 * * * * * * * 1987 947 * * * * * * 3140 * * 77 0 * * * * * * 2657 0 0 T 78 * * 1604 * * 3420 * * * * * 3140 * * * 1415 3489 * * * 78 0 * * * * * * 2657 0 0 K 79 * * * 2893 * * * * 415 * * * 3114 * * * * * * * 79 0 * * * * * * 2657 0 0 P 80 * * 1127 2317 * * * * * * * * 3489 * * 1987 * * * * 80 0 * * * * * * 2657 0 0 E 81 * * 2560 484 * * * * * * * * * 3114 * * * * * * 81 0 * * * * * * 2657 0 0 I 82 * * * * * * * 582 2893 3654 * * * * * * * 3086 * * 82 0 * * * * * * 2657 0 0 K 83 3140 * * * * 3518 * 3654 1347 3086 * * * * 2259 * * * * * 83 0 * * * * * * 2657 0 0 S 84 1927 * * 2100 3140 * * * * * * * * 3654 * 1685 * * * * 84 0 * * * * * * 2657 0 0 L 85 * * * * * * * * * 209 * * * * * * * 2893 * * 85 0 * * * * * * 2657 0 0 F 86 * * * * 3489 * * 1123 * * 1146 * * * * * * * * * 86 0 * * * * * * 2657 0 0 K 87 2259 * 3140 3086 * 3706 * * 3489 * * 2893 * 1945 * * * * * * 87 0 * * * * * * 2657 0 0 A 88 2594 * 2893 3427 * 1204 * * 3420 * * * * 3654 * * * * * * 88 0 * * * * * * 2657 0 0 L 89 * * * * * * * * * 181 * * * * * * * 3086 * * 89 0 * * * * * * 2657 0 0 H 90 * * * * * * 1506 * 962 * * * * 2893 * * * * * * 90 0 * * * * * * 2657 0 0 E 91 2424 * 1825 1819 * * * * * * * * * * * 3140 2893 * * * 91 0 * * * * * * 2657 0 0 K 92 * * * * * * * * 2161 * * * * * 365 * * * * * 92 0 * * * * * * 2657 0 0 I 93 * * * * * * * 1933 * 842 3518 * * * * * * 3427 * * 93 0 * * * * * * 2657 0 0 D 94 * * 947 * * * * * * 1987 * * * * * * 3114 3140 * * 94 0 * * * * * * 2657 0 0 H 95 * * 2011 3114 * * 2594 * * * * * * * * * * * 3420 1406 95 0 * * * * * * 2657 0 0 L 96 * * * * * * * 2100 * 1187 * * * * * * * 1611 * * 96 0 * * * * * * 2657 0 0 T 97 2100 * * * * * * * * * * * * * * * 662 2893 * * 97 0 * * * * * * 2657 0 0 V 98 * * * * * * * 822 * * * * * * * * * 1203 * * 98 0 * * * * * * 2657 0 0 H 99 * * 3420 * * * 2504 * 3086 * * * * * * * 707 * * * 99 0 * * * * * * 2657 0 0 G 100 * * * * * 1213 * * 3086 * * * * * 1149 * * * * * 100 0 * * * * * * 2657 0 0 S 101 * * * * * * * * * 3518 * * * * * 132 * * * * 101 0 * * * * * * 2657 0 0 L 102 * * * * * * * * * 379 * * * * 3086 * 3140 * * * 102 0 * * * * * * 2657 0 0 N 103 * * * * * * * * * * * 0 * * * * * * * * 103 0 * * * * * * 2657 0 0 T 104 2224 3086 * 1870 * 3114 * * * 3706 * * * * 3140 * 3489 * * * 104 0 * * * * * * 2657 0 0 E 105 * * * 0 * * * * * * * * * * * * * * * * 105 0 * * * * * * 2657 0 0 L 106 * * * * * * * * * 0 * * * * * * * * * * 106 0 * * * * * * 2657 0 0 T 107 * * * * * * * * 2893 * * 1528 * * * 3518 1213 * * * 107 0 * * * * * * 2657 0 0 V 108 * * 1572 * * * 2127 * * 3086 * 2893 * * * * * 2454 * * 108 0 * * * * * * 2657 0 0 P 109 * * * * * * 3140 * 3518 3427 * * 1722 2556 * 2100 * * * * 109 0 * * * * * * 2657 0 0 H 110 * * * * * * 1532 * * 2127 * 1532 * * 3654 * * * * * 110 0 * * * * * * 2657 0 0 Y 111 * * * * * * * * * * * * * * * * * * * 0 111 0 * * 0 * * * 2657 0 0 //