HHsearch 1.5 NAME c8cvmq_ FAM FILE c8cvmq_ COM /bmm/www/servers/phyre2/HH/hhmake -i c8cvmq_.a3m DATE Sat Mar 18 10:37:27 2023 LENG 102 match states, 102 columns in multiple alignment FILT 105 out of 229 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.5 EVD 0.4324 -0.1855 SEQ >ss_dssp CEEEEESSSCEEEECTTCEEEEECCSSCTTCEEEEEEEEEESSSCEECSHHHHHHCEEEEEEEEEECCCCEEEEEEETTTTEEEEEEECCCEEEEEEEEE EC >sa_dssp DDACADBEEDDCEACEDDDBDACECEDEDECDBEBDBDCBBEEEDEDEEEEDBDEBDADADBDCECEBEEDECEDEEEEEEDDDEDDDDDDCBCADADBB EE >ss_pred CEEEEEECCEEEEECCCCEEEEECCCCCCCCEEEEEEEEEECCCCEEECCCEECCEEEEEEEEEECCCCEEEEEEECCCCCCEEECCCCCCCEEEEEEEE CC >ss_conf 9799998998779716998994223778988799817899838833982727578699999997424781999994488878142150464129999775 09 >Consensus MyAIixxgGkQykVxxGdxixvxxlxxxxGxxixlxxVLxxxxxxxxiGxPxvxxxxVxaxVxexxkxxKixvxKxkrRKxyxkxxGHRQxxTxixIxxI xg >c8cvmq_ MYAIVRSGGRQHKVAVGDVVEIDKVADEAGSSIELTPLLVVDGESVTSDKDALGKVKVTAEVLGETKGPKIRILKYKNKTGYKKRQGHRQKYTQVKVTGI EG >UniRef50_Q4N0F3(61-160:237) 50S ribosomal protein L21, putative n=2 Tax=Theileria RepID=Q4N0F3_THEPA E=5e-23 s/c=1.08 id=23% cov=97% -YAIALISGNPRWIEKGRYYDVYRIHQQVGKRVYLNRIEFFHSEQgwFVNGEPYLQNIRAVATILKHFRSPKMRTVKFRSKKHYKRTIGHRQEMTRILID D--- >UniRef50_Q8M9U4(4-110:121) 50S ribosomal protein L21, chloroplastic n=1 Tax=Chaetosphaeridium globosum RepID=RK21_CHAGL E=5e-17 s/c=0.83 id=29% cov=99% -YAIIDLGGKQLRVEPGRFYDAHlfssfkSLLSESNTKIIIFRVLMIShGTEVQFGYPWLKNASVKARILHKKQNDKMLIYKMRSKKKTRKKFGHRQKIA RFIVDAIQ- >UniRef50_B7J0M4(1-101:103) 50S ribosomal protein L21 n=20 Tax=Borrelia RepID=RL21_BORBZ E=1e-16 s/c=0.86 id=25% cov=99% MYALVEINGKQYKAIEGEFLKIDKISPVEKDKLEFNSVLLINKDgEVKIGKPYVVNSLIRCTYKEDKKDKKVVSYRYRRRKSSERKVGHRQTYSYILVDE I-- >UniRef50_B5Y807(1-99:106) 50S ribosomal protein L21 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=RL21_COPPD E=1e-14 s/c=0.82 id=25% cov=95% MYALLEIRGKQYKVKENSTILVpgwEEIKPE-----EVKVLMVKDEANTVVGTPFVEGAEIELEPVKQIRTKKIKVRRFKAKVNYHRKKSHRIRYTILRI NGIK- >UniRef50_UPI0000E45F54(35-138:142) PREDICTED: similar to mitochondrial ribosomal protein L21 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E45F54 E=3e-21 s/c=0.98 id=28% cov=99% -FAIVYVSGTQHKVTSGDLILLQNdLPADVGERIRLEKVLLLGGDNFTlIGKPmlSLDTVRVEATVIEKTISEKKVHFRFKKRKRVARYRETYTNLTVLR INSIE- >UniRef50_A8Q668(37-205:213) Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q668_MALGO E=4e-09 s/c=0.37 id=29% cov=99% -YVVASIAGRTFVLSSSDVITVPRLPGvKLGDILELDLVHEVGSRDFTLraqdpahgarnpegGRfPLVllrsrtdnshcvrvrtdelvkseeahsivpf ssswaaqliptgmahvgaalssDVVQVQCVVIEHAKGPLERIEKFKRRKGYDKVITHKQPYTRIRVDTIK- >UniRef50_B2IE47(1-102:103) 50S ribosomal protein L21 n=10 Tax=Bacteria RepID=RL21_BEII9 E=1e-28 s/c=1.25 id=30% cov=100% MFAVIKTGGKQYSVAADDIITVMTLQGEPGDAVTFDSVLMLAGEgEPKIGAPFIAGATVSGEIVEQTRGPKVISFKKRRRQNSKRKRGHRQDLTLVKITG IN- >UniRef50_B2WC64(108-224:245) 54S ribosomal protein L49, mitochondrial n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2WC64_PYRTR E=2e-06 s/c=0.46 id=20% cov=91% --------GRPYLLTRGDTLRLPFHmpNIRPGDVLRLNRATHIGSRDYTLKAPepikgnadhgkklfYLDERLYTcrARVVGIESEPLRVEEKTKRRQRH TKHVKSKLRFTVLKITDL-- >UniRef50_C7LKB3(1-103:106) 50S ribosomal protein L21 n=1 Tax=Candidatus Sulcia muelleri SMDSEM RepID=C7LKB3_SULMS E=8e-05 s/c=0.47 id=26% cov=100% MEAYFEILGFQFKATLNSLITIPYLKKEKegNEIIINNIIYLNEKGKILMGFPYIKKIKLKAKIINHYKGKKLIIFKKKRRKGFKLKKGHRQLLTTIKII GFE- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 4604 0 0 Y 2 * * 6028 5107 2022 * 5799 * 5729 6445 * 6473 * 6260 * * * * 6437 677 2 0 * * * * * * 5463 0 0 A 3 180 5123 * * * 5944 * 5824 * * * * * * * 6905 * 4428 * * 3 0 * * * * * * 5472 0 0 I 4 * * * * * * * 1037 * 4216 * * * * * * 4515 1322 * 6031 4 0 * * * * * * 5497 0 0 V 5 3779 * * * 3309 * * 1196 * 4415 * * * * * * * 1544 * * 5 0 * * * * * * 5497 0 0 R 6 6005 * 4367 1585 * * 4123 * 2569 6258 6816 6324 * 3328 3089 3981 6288 5746 * 5044 6 0 * * * * * * 5497 0 0 S 7 3586 5854 4372 * 4835 * 6817 1903 * 3599 * 4865 * 5519 * 3700 2098 3646 * 6546 7 0 * * * * * * 5497 0 0 G 8 3919 4690 * * * 818 3828 * 5271 4687 * 4449 * 5756 4714 3469 * * * * 8 0 * * * * * * 5497 0 0 G 9 5001 * 5621 * * 426 * * * * * 3910 5850 * * 3053 * * * * 9 25 5850 * 0 * * * 5497 1000 0 R 10 * * * * 4179 6628 4647 6737 949 5579 7268 6258 * 4650 2202 4975 6064 6613 * 6288 10 0 * * * * * * 5497 0 0 Q 11 * * * * * * * 6512 * * 6788 * 3582 184 * * 5929 * * * 11 0 * * * * * * 5497 0 0 H 12 * * * 6078 2738 * 4628 * * 3960 5929 * * 6565 4772 * * 6548 4712 694 12 0 * * * * * * 5515 0 0 K 13 * * * 7174 5699 * * 4870 1284 2748 * 5779 * 6068 2517 5215 5876 5188 3450 6744 13 0 * * * * * * 5515 0 0 V 14 4007 * * * 7146 * * 3477 * 4420 6068 * * * * * 6847 376 * * 14 0 * * * * * * 5515 0 0 A 15 3660 * 6911 1794 6010 * 6702 5634 3247 * 6863 * * 4027 3547 3066 2427 6306 * * 15 0 * * * * * * 5519 0 0 V 16 4262 6010 6164 1713 * * * 6306 3026 4533 * 5736 2490 4159 5348 4120 4537 4133 * * 16 0 * * * * * * 5519 0 0 G 17 * * 3981 4871 * 417 7010 * 5781 * * 3305 * * 6648 5945 * * * * 17 0 * * * * * * 5519 0 0 D 18 7044 * 1156 3872 * * 5325 * 3632 * 6141 6840 * 3020 3024 3504 * * 6335 * 18 0 * * * * * * 5519 0 0 V 19 6106 * 5489 4286 3084 * 5570 3280 3958 3207 7311 7086 * 6334 4993 4381 3557 2151 6561 3810 19 0 * * * * * * 5519 0 0 V 20 * * * * 5361 * * 1357 * 1875 * * * * * * * 2737 * 2622 20 0 * * * * * * 5541 0 0 E 21 5571 5481 2776 4954 4234 * 5358 5211 2860 3165 * 4360 * 4569 3336 4763 3440 4991 * 3751 21 0 * * * * * * 5541 0 0 I 22 6376 6570 * * 5384 * * 2086 * 3018 5339 * * * * * 3224 1111 * * 22 56 4709 * 1298 753 * * 5541 2513 0 D 23 6353 * 2067 1541 6559 * 5053 * * * 7296 3000 2443 5753 5758 * * * * 6325 23 177 3111 * 595 1564 * * 5541 3603 0 K 24 * * * 5719 4912 5768 4096 * 1751 3420 * 4796 5447 5221 2043 4296 6111 * 6566 3716 24 17 6399 * 1585 585 * * 5541 1000 0 V 25 5100 * * * 5206 * 7079 2600 * 886 4817 * 6790 5210 5621 * 5328 3780 5618 5607 25 51 4844 * 675 1420 * * 5541 1944 0 A 26 3212 * 3032 4770 * 4613 5328 * 2075 5379 * 3703 2567 5714 * 3074 6986 * * 6082 26 145 3555 6603 0 * * * 5541 3187 0 D 27 1913 * 5489 5088 4228 2337 4350 6959 3927 3910 * 6850 5055 3836 * 4207 6378 3893 * * 27 202 2939 * 66 4492 0 * 5534 3729 1000 E 28 3599 * 2891 1694 * 5715 * 6639 2928 * * 3451 6529 4367 6082 3389 5125 5415 * * 28 46 * 4980 * * * * 5541 0 0 A 29 2521 5378 6382 3628 * 6545 * 3748 3981 3610 * 5716 2798 5608 6640 5286 * 1946 * * 29 39 5230 * 1507 625 1545 605 5512 1680 2148 G 30 * * 5180 7234 * 446 * * 4129 * * 3126 6357 6301 6015 6736 6580 * * * 30 27 5752 * 2322 322 956 1045 5538 1000 1660 S 31 4194 * 1532 2851 * 3486 * * 4100 * 5871 5714 * 4533 5526 2847 4023 6395 * * 31 0 * * * * * 0 5537 0 1000 S 32 5146 6581 4714 2643 6265 * * 4040 2027 7043 6746 4702 6981 4870 3406 4006 4276 2853 * * 32 13 6767 * 1585 585 * 0 5537 1000 1000 I 33 6113 * * * 4162 * * 1436 6305 1966 * * 6653 * * * * 1865 * 7126 33 18 * 6361 * * 0 * 5537 0 1000 E 34 5180 * 4390 1979 4767 * 4681 4071 4482 5301 * 5033 6957 4365 3261 3822 3227 4253 * 4496 34 16 6495 * 0 * * 0 5534 1000 1000 L 35 6377 * * * 1874 * * 2848 6390 1089 5756 6039 * 6823 * * 6572 4606 * * 35 11 * 7052 * * * 0 5534 0 1000 T 36 5505 * 2103 3001 6370 3872 6064 * 3321 6294 * 2551 4000 5060 4716 4259 4420 6384 * * 36 0 * * * * 0 * 5534 0 1587 P 37 5333 6552 2822 3909 * * * 6048 2197 5956 * 4682 4353 5050 2314 4270 4477 3453 * * 37 19 7208 7359 0 * * * 5541 1000 0 L 38 4720 * * * * * * 2281 6315 2583 6745 * * * * * * 817 * * 38 11 * 7034 * * 0 * 5546 0 1000 L 39 5204 7081 * 6314 5351 * 5954 4530 6545 588 4236 7113 * * * 5577 4884 4387 7078 5463 39 51 5234 6947 0 * * 0 5541 1966 1000 V 40 2978 5274 * 5938 3252 * * 5518 6386 1452 2685 * * 6292 * * 4320 3485 * 5719 40 80 4204 * 189 3025 927 1077 5541 2890 1434 V 41 4452 5150 * * 3630 5552 6551 2737 5296 2482 5628 5071 * * * 5291 5219 1660 * 4639 41 207 2995 6912 483 1814 * 0 5541 3737 1000 D 42 6283 * 1955 4567 * 1673 6311 * 3482 6538 * 3230 * 5586 6943 3253 6175 7284 * * 42 186 3177 6621 480 1822 927 1077 5543 3456 1465 G 43 5244 * 2380 4578 * 1453 7118 * 4038 * 6730 3823 * 6622 * 2345 5694 * * * 43 40 5754 6809 0 * 0 * 5539 1551 1466 E 44 3798 * 2958 1855 * 2964 * * 3098 * * 4983 4884 5338 3481 4276 4682 7006 * * 44 118 3667 * 178 3109 * 0 5540 3292 1000 S 45 4021 * 2590 2446 6774 3941 * 7129 2648 6821 * 2770 * 3885 6889 3992 5577 6736 * 5438 45 82 4486 6548 346 2228 * 0 5540 2724 1000 V 46 4093 * 6921 5757 2237 5009 * 3083 5777 3446 5700 5864 4936 * 7179 5659 3170 2343 6073 5342 46 46 5604 6508 0 * 1000 1000 5535 1628 1554 T 47 5858 * 5751 5107 4508 6796 5755 3439 3158 3525 * 5122 * 4224 5614 4029 1893 3238 6030 5783 47 210 2884 * 0 * * 0 5533 3602 1587 S 48 4481 * * * 4023 4276 * 1756 6921 2523 4748 6300 5796 * * 5144 * 2060 6560 5859 48 183 3261 6060 1753 508 0 * 5533 3122 1587 D 49 4545 * 4338 4578 * 378 6878 * 6721 6723 * * 6755 5509 * 5308 6332 * * * 49 52 7066 5158 0 * * 0 5547 1000 1511 K 50 3376 * 5881 5456 4065 4300 5811 * 2813 6606 6820 6697 3764 3349 2540 3524 3357 6047 * 5554 50 37 5305 * 426 1966 874 1138 5537 1600 2199 D 51 4702 * 4278 5905 6815 5633 * 5052 6494 * * 5770 377 * * * 5889 6937 * 6709 51 0 * * * * * 0 5526 0 1564 A 52 4430 * 6946 5656 3054 5303 6510 5845 5064 3229 * 5665 5889 5983 * 4933 2777 3517 5016 1912 52 14 6731 * 2585 263 * 0 5526 1000 1564 L 53 5074 * * 6815 6510 * * 2709 * 1411 * * * * * 5499 4243 1528 * * 53 60 5003 6742 4817 52 0 * 5526 1926 1564 G 54 3689 * 2740 2218 * 3492 * * 2745 5682 * 4093 3566 5064 6247 4003 4913 5744 * * 54 63 5330 5828 1000 1000 * 0 5537 1534 1000 K 55 4614 * 4488 4370 * 1979 * 6785 3479 5155 * 1964 6694 5778 5265 3777 4637 4841 * 5191 55 96 3954 * 1077 927 1567 594 5531 2523 1913 V 56 1234 5766 * * 5189 4303 * 3895 7114 6500 * 6241 * * 4713 5021 7024 1890 * 4910 56 13 * 6751 * * * 0 5533 0 1591 K 57 4255 * 5338 4836 6363 6593 * 4256 1828 4786 * * * 5942 2848 3002 2955 3803 * 6093 57 24 6775 7082 1585 585 0 * 5527 1000 1821 V 58 5646 * * * 4945 * * 2423 * 4761 * * * * * * * 508 * 5580 58 0 * * * * * 0 5543 0 1000 T 59 * * 6279 2124 * * 4197 4634 2196 5044 * 6254 * 4172 5562 3688 2529 3985 * 6562 59 25 5867 * 1000 1000 0 * 5543 1000 1000 A 60 593 3683 * * * 2950 * * * 3812 * * * * * 6676 6681 4677 * * 60 30 5584 * 1000 1000 * * 5541 1000 0 E 61 6607 * 4794 1973 * * * 4337 2883 * * * * 5368 3578 4688 2100 2900 * * 61 0 * * * * * * 5541 0 0 V 62 * 6790 * * 6273 * * 1487 * 4693 * * 5755 * * * * 854 * 6519 62 0 * * * * * * 5541 0 0 L 63 6204 * * 3305 * 6613 * 2724 4666 1581 * * * 6529 * 6999 4028 1888 * * 63 0 * * * * * * 5541 0 0 G 64 4383 6859 4306 1236 * 3068 5034 * 2931 * * 4271 6514 4256 5100 4525 * * * * 64 30 6986 6290 0 * * * 5541 1000 0 E 65 7049 6591 4560 4537 5200 * 1242 5228 3472 * 5809 4110 * 2627 * * 4517 4366 * * 65 15 6592 * 0 * * 0 5530 1000 1000 T 66 3540 5242 4357 4302 2727 2901 * 3532 4133 4161 6672 * 6309 * 6171 4566 2996 3688 * 5480 66 0 * * * * * 0 5530 0 1000 K 67 5863 * 5602 4860 5745 * * * 1425 3491 * 6618 * 4701 1466 4743 * * * * 67 18 * 6309 * * * 0 5530 0 1000 G 68 3935 6041 2496 3110 * 1311 5564 * 5222 * * 5230 * 6139 * 3613 4577 * * 6518 68 0 * * * * 0 * 5520 0 1581 P 69 5049 * 2725 3216 * 5321 4925 * 2072 * 6032 5754 2102 6653 3677 5336 * 6338 5422 * 69 0 * * * * * * 5541 0 0 K 70 * * * 4558 * * * * 299 4758 4890 * 4824 * 6176 * 5322 * * * 70 14 6740 * 0 * * * 5541 1000 0 I 71 * 6338 * 5398 * * * 1491 4554 3532 4670 * * 4863 4368 * 4793 1784 * 5035 71 0 * * * * * * 5541 0 0 R 72 * * * 6144 6994 * 4984 2195 3821 2577 * 6220 6032 6176 2999 5953 3349 2630 * 4432 72 19 * 6290 * * * * 5541 0 0 I 73 4024 6334 * * 6732 5287 4724 1684 4714 5219 6074 * * * 6553 4145 4736 1538 6249 * 73 0 * * * * * 0 5530 0 1000 L 74 6074 * * 4203 1335 4487 5138 3779 5745 4333 5358 * * 5128 4961 * * 3363 * 2856 74 0 * * * * * 0 5530 0 1000 K 75 * * * * * * 4866 5882 486 * * * * 4727 2609 * 5577 6377 * * 75 12 * 6946 * * * 0 5530 0 1000 Y 76 6057 * * * 1865 * 4350 5742 2031 6306 3236 * * 6015 5380 6331 4709 * * 2403 76 0 * * * * 0 * 5528 0 1593 K 77 * * * 6681 5758 * 5710 4381 834 7121 * 5546 * 6644 1825 6640 * * 6287 * 77 9 * 7381 * * * * 5541 0 0 N 78 4288 * * * * 6678 * * 2968 * * 5295 2524 6160 1035 3187 * * * * 78 0 * * * * 0 * 5545 0 1000 K 79 * * * 6290 * 6266 * * 1581 * * * * 5879 747 6083 * 6330 * * 79 0 * * * * * * 5541 0 0 T 80 5205 5017 * 6153 * * 5496 * 534 * * * * 3587 3929 * 4838 4988 * * 80 21 * 6082 * * * * 5541 0 0 G 81 5323 * 4322 * * 2240 2849 * 3119 * * 2400 * 4636 2377 5233 6552 * * * 81 0 * * * * 0 * 5516 0 1000 Y 82 * * * 6124 4128 * 3233 6083 * * 6872 6994 * * 5873 2631 3205 6603 5117 1105 82 0 * * * * * * 5541 0 0 K 83 6289 * 5956 4841 * * 3287 * 2138 5879 4086 * * 4028 1552 4318 5164 4314 * * 83 0 * * * * * * 5541 0 0 K 84 * * * * * 5758 6290 * 1222 5190 * * * * 1266 6300 5358 4482 6034 * 84 0 * * * * * * 5541 0 0 R 85 5710 * * 5276 4194 * 4982 4483 1574 4046 6514 * * 5053 2776 5106 2553 5956 * 5321 85 0 * * * * * * 5541 0 0 Q 86 4745 * * * 4535 * * 3721 2635 4772 5357 3040 * 3186 2616 * 3616 4158 4918 4148 86 0 * * * * * * 5517 0 0 G 87 6596 * * * 6531 373 6284 5407 5556 * * 5798 * * 5157 4354 4575 6366 * * 87 0 * * * * * * 5517 0 0 H 88 * 5754 * 6015 4620 * 397 5264 * * * * 6596 * * 4669 * 4220 * 4781 88 0 * * * * * * 5517 0 0 R 89 * * * * * * * * 3407 * * * * 5324 243 * 5438 6273 * * 89 0 * * * * * * 5517 0 0 Q 90 5581 * 5489 5646 * 5754 3394 5746 * * * * 5686 499 6852 4462 5413 * * * 90 0 * * * * * * 5517 0 0 K 91 5077 6747 3485 3416 5445 4593 5867 * 2688 4961 * 4651 3098 3986 3559 4048 6516 5242 3721 5009 91 0 * * * * * * 5517 0 0 Y 92 * 6849 * 7229 3036 * 6330 4516 * 1897 3470 5905 * 4330 * * * 3924 * 1664 92 19 6284 * 3000 193 * * 5517 1000 0 T 93 6369 * * * * * 6673 5754 * 5390 * * * 5440 * 3311 374 5219 * 6228 93 0 * * * * * * 5517 0 0 Q 94 4040 * 6046 3835 * 6015 6294 4559 2834 4336 6531 6624 6510 5238 1781 6130 3712 2810 * 6516 94 0 * * * * * * 5517 0 0 V 95 * * * * 3950 * * 1519 * 1642 5556 * * * * * * 2031 * * 95 0 * * * * * * 5517 0 0 K 96 5754 * * 4550 7032 * * 6369 1577 3065 5083 * * 5351 1606 5211 5157 5891 * 6649 96 0 * * * * * * 5517 0 0 V 97 * * * * * * * 593 * * * * * * * * * 1568 * * 97 0 * * * * * * 5517 0 0 T 98 6562 * 2828 3208 * 6944 * 4179 3540 3995 5530 3407 * 5054 6991 3704 2073 4057 * * 98 0 * * * * * * 5497 0 0 G 99 4300 * 2322 2676 * 3549 6296 * 3256 * * 4675 * 5715 6498 1890 4716 * * 6289 99 0 * * * * * * 5494 0 0 I 100 * * * * 5970 * * 459 * 3237 * * * * * * * 2733 * * 100 0 * * * * * * 5472 0 0 E 101 4231 * * 1553 * * * * 1913 5874 * 2880 * 4098 3319 5967 6262 * * * 101 0 * * * * * * 5139 0 0 G 102 * * * * * 0 * * * * * * * * * * * * * * 102 0 * * 0 * * * 3290 0 0 //